Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0531
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 33 0.17
AF003151-2|AAK18919.3| 277|Caenorhabditis elegans Prion-like-(q... 33 0.22
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 31 0.90
Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical ... 29 3.6
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 29 4.8
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 28 6.3
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 6.3
Z82286-6|CAB05304.1| 376|Caenorhabditis elegans Hypothetical pr... 28 8.4
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 28 8.4
AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin pr... 28 8.4
AF240777-1|AAF63745.1| 376|Caenorhabditis elegans delta 12 fatt... 28 8.4
AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated... 28 8.4
AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated... 28 8.4
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 520 NDDTSNMNFGSQNSNHQSTHNTIRSDKNNP-TVDNFFTNANGNRKKEELDLNQSYKNPSN 696
N+ S+ + NHQS H ++ K+NP + N F N + ++E+ + + + +
Sbjct: 133 NEQNSSFKQDHNSKNHQSNHQKTKNKKSNPYSNQNNFNNTRKDYREEKSGFSWNTGSADD 192
Query: 697 YE 702
YE
Sbjct: 193 YE 194
>AF003151-2|AAK18919.3| 277|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 24
protein.
Length = 277
Score = 33.1 bits (72), Expect = 0.22
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Frame = +1
Query: 514 NNNDDTSNMNFGSQNSNHQ--STHNTIRSD----KN---NPTVDNFFTNANGNRKKEELD 666
NNND +SN N+G N+ ++ T T+ D KN N V++ F + +R +E+
Sbjct: 157 NNNDWSSNYNYGGSNAANEPKMTKQTVAGDDSWNKNKWTNKQVEDMFKKSIDDR-GDEIQ 215
Query: 667 LNQSYKN-PSNYEKQNI 714
L +K NY+ Q++
Sbjct: 216 LEDDFKKIDKNYKTQSV 232
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 514 NNNDDTSNMNFGSQNS-NHQSTHNTIRSDKNNPTVDNFFTNANGN 645
NNN+ + N N+GS NS + N+ + N +N + NGN
Sbjct: 211 NNNNSSGNSNYGSNNSGSGNGNSNSGNGNSGNGNGNNAGNSGNGN 255
>Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical
protein C05B5.3 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 508 FPNNNDDTSNMNFG-SQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYK 684
F NN + + NFG S N N + ++ S+ N FF N N++ + S
Sbjct: 219 FFNNQNQQNGQNFGNSGNQNGVNPYSGAFSNGQNQNQQGFFGNNQNNQQNSNGQVQGSQN 278
Query: 685 NPSNYEKQN 711
N + QN
Sbjct: 279 NQIWNQNQN 287
>AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical
protein C09E7.10 protein.
Length = 208
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +3
Query: 3 QRPEHR--DPQDYTALNERKSQDKHTENLI--PNLTNSHKSYGYTGIDKDESIVSQDK 164
++P+ + DP + L E +D H +I + + H YG T DKD Q K
Sbjct: 73 EKPKQKLIDPSTFITLKENDWRDAHEGRMIIWSHESQHHPDYGKTFTDKDRYTYRQSK 130
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 165 VAFTNDNGNLYQSKESRSENSGTSTQDTVPKLFMYRQTAYKIINCIKWQEAAET 326
V ++NG ++ + S+S+N GT ++ P+L Q+ I+ + AET
Sbjct: 131 VQIVSNNGKVFPNPISQSKNQGTMLKNRPPRLVRTHQSDLANIDTSHSRNPAET 184
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Frame = +3
Query: 3 QRPEHRDPQDYTALNERKSQD--KHTENLIPN-LTNSHKSYGYTGIDKDESIVSQDKVAF 173
Q QD+ ++ K +D + T +P L G+ +S+ +++K+A
Sbjct: 656 QNQSQNQSQDHEKNSKTKPKDPKQGTRLFVPKALRKEADDLPANGLLSPQSVETKEKIAA 715
Query: 174 TNDNGNLYQSKESRSE--NSGTSTQDTVPK 257
NG++++S E +S T T+PK
Sbjct: 716 AKSNGDVFKSDEQSKGFWDSLTPEVSTIPK 745
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Frame = +1
Query: 550 SQNSNHQSTHNTIRSDKNNPTVDNFFTN------ANGNRKKEELD-LNQSYKN 687
S+N +HQS H+ ++++ + D F TN N N + E L+ N Y+N
Sbjct: 490 SRNFSHQSQHSGRQAEQPYNSYDQFLTNGRTESYGNTNHQSESLEKSNYDYRN 542
>Z70781-3|CAA94833.2| 352|Caenorhabditis elegans Hypothetical
protein F57A8.5 protein.
Length = 352
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -3
Query: 739 LLKLKLLVEYSAFHNLKDFYSFDLNPIL 656
LL+ L+++ S H LK FYSFD NP L
Sbjct: 107 LLQNLLIMDSSRQHKLKTFYSFD-NPSL 133
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/86 (22%), Positives = 42/86 (48%)
Frame = +3
Query: 3 QRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTND 182
Q+ HR T+ + D +T ++P T+S TG+ ++ ++ + + +N
Sbjct: 18 QQQRHRRQSSGTSGGGASNLDANTLKVLPTTTSSQSICCDTGVAEN---LNLNLNSISNH 74
Query: 183 NGNLYQSKESRSENSGTSTQDTVPKL 260
N ++ +SK + S + TS + + P +
Sbjct: 75 NSSIPKSKSNNSVSGITSRRVSFPNI 100
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/86 (22%), Positives = 42/86 (48%)
Frame = +3
Query: 3 QRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTND 182
Q+ HR T+ + D +T ++P T+S TG+ ++ ++ + + +N
Sbjct: 18 QQQRHRRQSSGTSGGGASNLDANTLKVLPTTTSSQSICCDTGVAEN---LNLNLNSISNH 74
Query: 183 NGNLYQSKESRSENSGTSTQDTVPKL 260
N ++ +SK + S + TS + + P +
Sbjct: 75 NSSIPKSKSNNSVSGITSRRVSFPNI 100
>Z82286-6|CAB05304.1| 376|Caenorhabditis elegans Hypothetical
protein W02A2.1 protein.
Length = 376
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = -2
Query: 455 HYLMRLFEVILSIVLSYLQH*NYLISLY 372
+Y+ LF+ ++ ++++YLQH N I +Y
Sbjct: 234 YYIPLLFQGLILVIITYLQHQNEDIEVY 261
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 637 NGNRKKEELDLNQSYKNPSNYEKQNI 714
NGN + E DL+ S +N +N + QN+
Sbjct: 1171 NGNESESEEDLSDSEENQNNTDPQNL 1196
>AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin
protein.
Length = 377
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/75 (18%), Positives = 34/75 (45%)
Frame = +2
Query: 263 YVQTDGLQDNQLYQVAGSSGDSIIMSRAQTNKGPLYYIVKSNNFNAANNLEQSTILPQTS 442
Y QT+G+ + + + GD+ + ++ + Y + + +N++Q+ + P T
Sbjct: 86 YPQTEGMLADVMQKYGQQLGDNSDLGKSLNDAAETYRQMADIKYQMEDNVKQNFLDPLTH 145
Query: 443 ALNNDASYIIRYANK 487
NN+ + + K
Sbjct: 146 LQNNELKDVNHHRTK 160
>AF240777-1|AAF63745.1| 376|Caenorhabditis elegans delta 12 fatty
acid desaturaseFAT-2 protein.
Length = 376
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = -2
Query: 455 HYLMRLFEVILSIVLSYLQH*NYLISLY 372
+Y+ LF+ ++ ++++YLQH N I +Y
Sbjct: 234 YYIPLLFQGLILVIITYLQHQNEDIEVY 261
>AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated
protein 57, isoform a protein.
Length = 377
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/75 (18%), Positives = 34/75 (45%)
Frame = +2
Query: 263 YVQTDGLQDNQLYQVAGSSGDSIIMSRAQTNKGPLYYIVKSNNFNAANNLEQSTILPQTS 442
Y QT+G+ + + + GD+ + ++ + Y + + +N++Q+ + P T
Sbjct: 86 YPQTEGMLADVMQKYGQQLGDNSDLGKSLNDAAETYRQMADIKYQMEDNVKQNFLDPLTH 145
Query: 443 ALNNDASYIIRYANK 487
NN+ + + K
Sbjct: 146 LQNNELKDVNHHRTK 160
>AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated
protein 57, isoform c protein.
Length = 379
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/75 (18%), Positives = 34/75 (45%)
Frame = +2
Query: 263 YVQTDGLQDNQLYQVAGSSGDSIIMSRAQTNKGPLYYIVKSNNFNAANNLEQSTILPQTS 442
Y QT+G+ + + + GD+ + ++ + Y + + +N++Q+ + P T
Sbjct: 86 YPQTEGMLADVMQKYGQQLGDNSDLGKSLNDAAETYRQMADIKYQMEDNVKQNFLDPLTH 145
Query: 443 ALNNDASYIIRYANK 487
NN+ + + K
Sbjct: 146 LQNNELKDVNHHRTK 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,156,052
Number of Sequences: 27780
Number of extensions: 336862
Number of successful extensions: 1072
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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