BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0531 (765 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 34 0.002 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 26 0.33 DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 25 0.77 EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 24 1.3 EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 24 1.8 AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 24 1.8 DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.1 EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 5.4 AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 5.4 AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 22 5.4 DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 9.5 AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 9.5 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.5 >Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP57-1 protein. Length = 544 Score = 33.9 bits (74), Expect = 0.002 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = +1 Query: 535 NMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTN-ANGNRKKE-ELDLNQSYKNPSNYEKQ 708 N N G+QN+++Q+ N + NN DN N NGNR+ + + N+ N N KQ Sbjct: 424 NQNAGNQNADNQNADN---QNANNQNADNQNANKQNGNRQNDNRQNDNKQNGNRQNDNKQ 480 Query: 709 N 711 N Sbjct: 481 N 481 Score = 33.1 bits (72), Expect = 0.003 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = +1 Query: 517 NNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKE-ELDLNQSYKNPS 693 NN + N N QN N Q+ N +K N N NGNR+ + + + N+ N Sbjct: 443 NNQNADNQNANKQNGNRQN-DNRQNDNKQNGNRQN-DNKQNGNRQNDNKQNGNRQNGNKQ 500 Query: 694 NYEKQN 711 N KQN Sbjct: 501 NDNKQN 506 Score = 31.1 bits (67), Expect = 0.012 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%) Frame = +1 Query: 520 NDDTSNMNFGSQNSNHQSTHNTIRSDKN-NPTVDNFFTN--ANGNRKKE-ELDLNQSYKN 687 N + N N +QN+N+Q+ N + +N N DN + NGNR+ + + + N+ N Sbjct: 429 NQNADNQNADNQNANNQNADNQNANKQNGNRQNDNRQNDNKQNGNRQNDNKQNGNRQNDN 488 Query: 688 PSNYEKQN 711 N +QN Sbjct: 489 KQNGNRQN 496 Score = 29.5 bits (63), Expect = 0.036 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +1 Query: 517 NNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKE-ELDLNQSYKNPS 693 +N + N N +QN+++Q+ +N +D N N N NR+ + + + N+ N Sbjct: 423 HNQNAGNQNADNQNADNQNANNQ-NADNQNANKQN-GNRQNDNRQNDNKQNGNRQNDNKQ 480 Query: 694 NYEKQN 711 N +QN Sbjct: 481 NGNRQN 486 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 26.2 bits (55), Expect = 0.33 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = +1 Query: 520 NDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANG 642 N + S + G+ N+N + +N ++ NN N N NG Sbjct: 222 NSNNSTITAGNANTNASNNNNNNNNNNNNNNGANDNGNGNG 262 Score = 24.2 bits (50), Expect = 1.3 Identities = 10/40 (25%), Positives = 21/40 (52%) Frame = +1 Query: 526 DTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGN 645 +++N + N+N +++N ++ NN + N NGN Sbjct: 222 NSNNSTITAGNANTNASNNNNNNNNNNNNNNGANDNGNGN 261 Score = 23.8 bits (49), Expect = 1.8 Identities = 9/31 (29%), Positives = 16/31 (51%) Frame = +1 Query: 514 NNNDDTSNMNFGSQNSNHQSTHNTIRSDKNN 606 NNN++ +N N + +N N ++ NN Sbjct: 239 NNNNNNNNNNNNNNGANDNGNGNGASNNNNN 269 >DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 25.0 bits (52), Expect = 0.77 Identities = 8/24 (33%), Positives = 16/24 (66%) Frame = +1 Query: 514 NNNDDTSNMNFGSQNSNHQSTHNT 585 NNN ++N N+ + +N+ + +NT Sbjct: 84 NNNSLSNNYNYNNNYNNYNNNYNT 107 >EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. Length = 686 Score = 24.2 bits (50), Expect = 1.3 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +2 Query: 371 YIVKSNNFNAANNLEQSTILPQTSALNNDASYII--RYANKQPNEFSN 508 Y S+ A NL+ S + +NN +YI+ Y++K E+++ Sbjct: 169 YFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKNMREYND 216 >EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. Length = 686 Score = 23.8 bits (49), Expect = 1.8 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +2 Query: 371 YIVKSNNFNAANNLEQSTILPQTSALNNDASYII--RYANKQPNEFSN 508 Y S+ A NL+ S + +NN +YI+ Y++K E+++ Sbjct: 169 YFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKYMREYND 216 >AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly protein MRJP2 protein. Length = 452 Score = 23.8 bits (49), Expect = 1.8 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +1 Query: 514 NNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNAN 639 N + +N N QN+N+Q+ +N + KN N N N Sbjct: 411 NTHCVNNNQNDNIQNTNNQNDNNQKNNKKNANNQKNNNQNDN 452 >DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride channel variant 1 protein. Length = 509 Score = 22.6 bits (46), Expect = 4.1 Identities = 8/26 (30%), Positives = 18/26 (69%) Frame = +1 Query: 517 NNDDTSNMNFGSQNSNHQSTHNTIRS 594 +++D N + +QN+NH ++H +R+ Sbjct: 107 SSNDPKNQ-YKNQNNNHYTSHQHLRT 131 >EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. Length = 683 Score = 22.2 bits (45), Expect = 5.4 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Frame = +1 Query: 562 NHQ--STHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKN 687 NH+ + H + SDKN + F + E+DL +Y N Sbjct: 494 NHKPFTYHIVVNSDKNVKGMVRIFLGPKYDEFGHEVDLVHNYMN 537 >AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. Length = 683 Score = 22.2 bits (45), Expect = 5.4 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Frame = +1 Query: 562 NHQ--STHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKN 687 NH+ + H + SDKN + F + E+DL +Y N Sbjct: 494 NHKPFTYHIVVNSDKNVKGMVRIFLGPKYDEFGHEVDLVHNYMN 537 >AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. Length = 226 Score = 22.2 bits (45), Expect = 5.4 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Frame = +1 Query: 562 NHQ--STHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKN 687 NH+ + H + SDKN + F + E+DL +Y N Sbjct: 120 NHKPFTYHIVVNSDKNVKGMVRIFLGPKYDEFGHEVDLVHNYMN 163 >DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor protein. Length = 459 Score = 21.4 bits (43), Expect = 9.5 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -1 Query: 261 IIWAQYPVLRFLSFRNEILYFDIN 190 I WA + V R L + Y DIN Sbjct: 271 ICWAPFHVQRLLYVYEDSTYDDIN 294 >AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic acetylcholine receptorApisa2 subunit protein. Length = 541 Score = 21.4 bits (43), Expect = 9.5 Identities = 9/23 (39%), Positives = 17/23 (73%) Frame = -2 Query: 89 RY*IFSMLILRLSFIKSRVILRV 21 +Y +F+M+++ LS + + VIL V Sbjct: 300 KYLLFTMILVGLSVVITIVILNV 322 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 21.4 bits (43), Expect = 9.5 Identities = 10/35 (28%), Positives = 16/35 (45%) Frame = +1 Query: 550 SQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKK 654 S + H + + + NN +N+ N N N KK Sbjct: 319 SNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNNCKK 353 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 202,685 Number of Sequences: 438 Number of extensions: 4697 Number of successful extensions: 32 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 25 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 23911269 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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