BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0531 (765 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g18810.1 68416.m02389 protein kinase family protein contains ... 36 0.030 At2g33850.1 68415.m04155 expressed protein contains 1 transmembr... 31 0.84 At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical... 31 1.1 At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 31 1.1 At5g12850.1 68418.m01475 zinc finger (CCCH-type) family protein ... 30 1.5 At1g75260.1 68414.m08743 isoflavone reductase family protein sim... 30 1.9 At1g79940.1 68414.m09342 DNAJ heat shock N-terminal domain-conta... 29 4.5 At1g78580.1 68414.m09158 alpha, alpha-trehalose-phosphate syntha... 29 4.5 At1g23000.1 68414.m02874 heavy-metal-associated domain-containin... 28 5.9 At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 28 5.9 At2g47810.1 68415.m05967 histone-like transcription factor (CBF/... 28 7.8 At1g62010.1 68414.m06994 mitochondrial transcription termination... 28 7.8 >At3g18810.1 68416.m02389 protein kinase family protein contains Pfam PF00069: Protein kinase domain Length = 700 Score = 35.9 bits (79), Expect = 0.030 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = +1 Query: 514 NNNDDTSNMNFGSQNSNHQS-THNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNP 690 NNN+D +N N + N+N+ + +N ++ NN +N N NGN D N + N Sbjct: 70 NNNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGN-DNNGNNNNG 128 Query: 691 SNYEKQN 711 +N + N Sbjct: 129 NNNDNNN 135 Score = 32.3 bits (70), Expect = 0.36 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +1 Query: 514 NNNDDTSNMNFGSQNSN-HQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNP 690 NNN+D +N N N+N + + N + NN +N N N N+ N+S P Sbjct: 91 NNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNNGNNNNGNNNDNNNQNNGGGSNNRSPPPP 150 Query: 691 SNYEKQNIQPIILVLANP 744 S +N LA P Sbjct: 151 SRNSDRNSPSPPRALAPP 168 Score = 31.5 bits (68), Expect = 0.64 Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = +1 Query: 514 NNNDDTSNMNFGSQNSNHQSTHNTIRSDK--NNPTVDNFFTNANGNRKKEELDLNQSYKN 687 NNN+D +N N G+ N+++ + +N ++ NN +N + NGN + N + N Sbjct: 79 NNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNNGNNNNGNNNDNNNQNN 138 Query: 688 PSNYEKQNIQP 720 ++ P Sbjct: 139 GGGSNNRSPPP 149 Score = 29.5 bits (63), Expect = 2.6 Identities = 18/67 (26%), Positives = 28/67 (41%) Frame = +1 Query: 511 PNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNP 690 P ++D S + N+N + N + NN +N N NGN K + N + N Sbjct: 56 PPSSDSQSPPSPQGNNNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNN 115 Query: 691 SNYEKQN 711 +N N Sbjct: 116 NNGNDNN 122 >At2g33850.1 68415.m04155 expressed protein contains 1 transmembrane domain; similar to Protein E6 (Swiss-Prot:Q01197) [Gossypium hirsutum] Length = 267 Score = 31.1 bits (67), Expect = 0.84 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%) Frame = +3 Query: 9 PEHRDPQDYTAL--NERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTND 182 P+ ++P + + NE+K D IP N + YG+ D + ++ +K D Sbjct: 39 PKEQNPNNLVPIETNEKKEPDDQNPAFIPQSENGYGLYGHETTDNNNEELNNNKY---ED 95 Query: 183 NGNLYQSKESRSENSGTSTQDT 248 N N S + S + TQ++ Sbjct: 96 NVNYDDSFSTPSLSETAQTQES 117 >At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical to ethylene-insensitive3 GI:2224933 from [Arabidopsis thaliana] Length = 628 Score = 30.7 bits (66), Expect = 1.1 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +1 Query: 514 NNNDDTSNMNFGSQNSNHQSTHNTIRSDKNN-PTVDNFFTNANGNR 648 NNN+ ++N F N+N+ + +D NN N N++GNR Sbjct: 539 NNNNSSNNQTFFQGNNNNNNVFKFDTADHNNFEAAHNNNNNSSGNR 584 >At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:1000090) [Gossypium barbadense] Length = 335 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/78 (24%), Positives = 31/78 (39%) Frame = +1 Query: 514 NNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPS 693 NNN++ + NF + +N++ N + + NN +N + KEE + N Sbjct: 153 NNNNNKYDANFKEEFNNNKYDENYAKEEFNNNNNNNNYNYKYDENVKEESFPENNEDNKK 212 Query: 694 NYEKQNIQPIILVLANPY 747 N N L PY Sbjct: 213 NVYNSNAYGTELERETPY 230 >At5g12850.1 68418.m01475 zinc finger (CCCH-type) family protein contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar) and Pfam domain, PF00023: Ankyrin repeat Length = 706 Score = 30.3 bits (65), Expect = 1.5 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = +2 Query: 305 VAGSSGDSIIMSRAQTNKGPLYYIVKSNNFNAANNLEQSTILPQTSA 445 V S S ++++ Q NK + +K+N ++ N+EQ ++L Q S+ Sbjct: 514 VLSPSHKSALLNQLQNNKQSMLSPIKTNLMSSPKNVEQHSLLQQASS 560 >At1g75260.1 68414.m08743 isoflavone reductase family protein similar to SP|P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: Isoflavone reductase Length = 593 Score = 29.9 bits (64), Expect = 1.9 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +1 Query: 511 PNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEE 660 P +T N + NHQ T + S+ NP V N +++ +RK +E Sbjct: 273 PEKKTETQNRTEIPTDDNHQKTKGALTSNLGNPRVTNREGSSSMSRKIKE 322 >At1g79940.1 68414.m09342 DNAJ heat shock N-terminal domain-containing protein / sec63 domain-containing protein similar to SP|Q9UGP8 Translocation protein SEC63 homolog {Homo sapiens}; contains Pfam profiles PF00226 DnaJ domain, PF02889 Sec63 domain Length = 702 Score = 28.7 bits (61), Expect = 4.5 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +3 Query: 132 DKDESIVSQDKVAFTNDNGNLYQSKESRSENSGTSTQ 242 D+DE +K NG++ Q KES SE SG+ + Sbjct: 666 DEDEKKDMDEKRGSKKANGSVKQKKESSSEESGSEEE 702 >At1g78580.1 68414.m09158 alpha, alpha-trehalose-phosphate synthase, UDP-forming, putative / trehalose-6-phosphate synthase, putative / UDP-glucose-glucosephosphate glucosyltransferase, putative similar to trehalose-6-phosphate synthase SL-TPS/P [Selaginella lepidophylla] GI:4100325; contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase Length = 942 Score = 28.7 bits (61), Expect = 4.5 Identities = 16/65 (24%), Positives = 30/65 (46%) Frame = +1 Query: 517 NNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNPSN 696 ++D + + G + +STHN +S + + +N+N N K + L K+ SN Sbjct: 825 SSDSGAKSSSGDRRPPSKSTHNNNKSGSKSSSS----SNSNNNNKSSQRSLQSERKSGSN 880 Query: 697 YEKQN 711 + N Sbjct: 881 HSLGN 885 >At1g23000.1 68414.m02874 heavy-metal-associated domain-containing protein similar to farnesylated protein ATFP3 [GI:4097547]; contains PF00403 Heavy-metal-associated domain Length = 358 Score = 28.3 bits (60), Expect = 5.9 Identities = 17/66 (25%), Positives = 27/66 (40%) Frame = +1 Query: 511 PNNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDNFFTNANGNRKKEELDLNQSYKNP 690 P ND N+N Q + KN P F +G+ +EE D + + P Sbjct: 89 PKTNDFIKNVNQKGQKQGSAKSGIEACKPKNGPKGAAFVAEEDGDGSEEE-DGDVQFPKP 147 Query: 691 SNYEKQ 708 +N ++Q Sbjct: 148 ANQQQQ 153 >At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein contains Pfam PF01422: NF-X1 type zinc finger; similar to transcriptional repressor NF-X1 (SP:Q12986) [Homo sapiens]; similar to EST gb|T21002 Length = 1188 Score = 28.3 bits (60), Expect = 5.9 Identities = 15/69 (21%), Positives = 28/69 (40%) Frame = +3 Query: 24 PQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQS 203 P + N +Q + ++N+ P N H+ Y S S + + N ++ Sbjct: 88 PNQHRRYNAPDNQHQRSDNIGPPQPNQHRRYNAPDNQHQRSDNSGPPQPYRHRRNNAPEN 147 Query: 204 KESRSENSG 230 + RS+N G Sbjct: 148 QHQRSDNIG 156 >At2g47810.1 68415.m05967 histone-like transcription factor (CBF/NF-Y) family protein contains Pfam PF00808 : Histone-like transcription factor (CBF/NF-Y) and archaeal histone; similar to LEC1-like protein (GI:22536010) [Phaseolus coccineus] Length = 160 Score = 27.9 bits (59), Expect = 7.8 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 508 FPNNNDDTSNMNFGSQNSNHQSTHN 582 F N N NFGS +SNHQ H+ Sbjct: 8 FQNPIPRYQNYNFGSSSSNHQHEHD 32 >At1g62010.1 68414.m06994 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF Length = 415 Score = 27.9 bits (59), Expect = 7.8 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Frame = +3 Query: 108 KSYGYTGIDKDESIVSQDKVAFTNDN---GNLYQSKESRSENSGTSTQ--DTVPKLFMYR 272 +SYG+T I S +V ND G+ Q +SR +S T+ TVPK+ R Sbjct: 78 RSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQFLQSRGASSSELTEVVSTVPKILGKR 137 Query: 273 Q 275 + Sbjct: 138 E 138 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,946,696 Number of Sequences: 28952 Number of extensions: 295975 Number of successful extensions: 970 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 887 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 934 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1712086600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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