Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0530
(690 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 99 5e-22
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 71 2e-13
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 68 1e-12
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 59 5e-10
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 56 4e-09
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 55 8e-09
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 54 2e-08
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 52 1e-07
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 43 4e-05
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 41 1e-04
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 38 0.001
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 36 0.007
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 34 0.017
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 34 0.022
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 31 0.16
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 31 0.21
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 29 0.48
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.48
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 29 0.48
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 29 0.48
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.84
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 1.9
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 27 2.6
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 27 3.4
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 27 3.4
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 26 4.5
SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces ... 26 4.5
SPBC887.01 |||acireductone dioxygenase family|Schizosaccharomyce... 26 5.9
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 5.9
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 26 5.9
SPBC8D2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.9
SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po... 25 7.8
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 99.1 bits (236), Expect = 5e-22
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = +3
Query: 87 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
+EDEYDYLFK VLIGDSGVGKS+LL RFTRNEFN+ESKSTIGVEFATR+I +D K
Sbjct: 3 QEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNK 57
Score = 95.9 bits (228), Expect = 5e-21
Identities = 43/64 (67%), Positives = 54/64 (84%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
VGAL+VYDI K S++NV RWL+ELR+HAD NI+IMLVGNK+DL HLR++ TEEA+AFA
Sbjct: 84 VGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAA 143
Query: 508 ATDL 519
+L
Sbjct: 144 ENNL 147
Score = 59.3 bits (137), Expect = 5e-10
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 492 ESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRPDA-EPAD 668
++ N LSFIETSA+D++NVE AFQ +LTEI+RIVS R + +G + P A + +
Sbjct: 139 QAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG--VHPTAGQTLN 196
Query: 669 VRPSQAD 689
+ P+ D
Sbjct: 197 IAPTMND 203
Score = 56.0 bits (129), Expect = 5e-09
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+KAQIWDTAGQERYRAITSAYYRGA
Sbjct: 59 IKAQIWDTAGQERYRAITSAYYRGA 83
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 70.5 bits (165), Expect = 2e-13
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = +3
Query: 96 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+ E++GKT KL+
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Score = 51.6 bits (118), Expect = 1e-07
Identities = 22/63 (34%), Positives = 41/63 (65%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
G ++VYD+ S+ NV++WL+E+ +A + + +LVGNKSD+ + + AK FA++
Sbjct: 83 GIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADS 142
Query: 511 TDL 519
++
Sbjct: 143 LNI 145
Score = 49.2 bits (112), Expect = 6e-07
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R ITS+YYRGA
Sbjct: 57 VKLQIWDTAGQERFRTITSSYYRGA 81
Score = 31.1 bits (67), Expect = 0.16
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 507 SNGLSFIETSALDSTNVEPAFQNILTEI 590
S + F+ETSA DSTNVE AF + +I
Sbjct: 142 SLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 68.1 bits (159), Expect = 1e-12
Identities = 32/56 (57%), Positives = 42/56 (75%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R+IE+DGK KL+
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQ 61
Score = 54.0 bits (124), Expect = 2e-08
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+G LL+YD+ S++NV W + HA +N+ +L+GNK D R + E+ +A A+
Sbjct: 83 MGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALAD 142
Score = 49.6 bits (113), Expect = 4e-07
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R IT+AYYRGA
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGA 82
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEI 590
G+++ G+ F+E SA + NV+ AF + EI
Sbjct: 137 GQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 59.3 bits (137), Expect = 5e-10
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +3
Query: 90 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 242
++ YDYL K+VL G SG GKS LL RF +N+++ + T+G++FA+R I V
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISV 53
Score = 56.8 bits (131), Expect = 3e-09
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAF 501
GA+LVYD+ S+E + WL ++R A I ++L G+KSDL++ R + TEEA F
Sbjct: 88 GAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQRQVSTEEAAEF 144
Score = 43.2 bits (97), Expect = 4e-05
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQE++R++ YYRGA
Sbjct: 62 IKLQIWDTAGQEKFRSVARNYYRGA 86
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 56.4 bits (130), Expect = 4e-09
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
A++VYDI H S+ N E+W+ ++R +++I+LVGNK+DL R + EE + A+
Sbjct: 87 AIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAK 144
Score = 47.2 bits (107), Expect = 2e-06
Identities = 18/52 (34%), Positives = 40/52 (76%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
FK+V +G+ VGK+SL++RF ++F+ ++TIG++F ++++ ++ +T +L+
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQ 63
Score = 35.1 bits (77), Expect = 0.010
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYR 322
++ Q+WDTAGQER+R++ +Y R
Sbjct: 60 VRLQLWDTAGQERFRSLIPSYIR 82
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 55.2 bits (127), Expect = 8e-09
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
KVV++GDSGVGK+ L+++F +F+ E K+TIG +F T+ + VD K
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDK 55
Score = 39.1 bits (87), Expect = 6e-04
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +2
Query: 263 QIWDTAGQERYRAITSAYYRGA 328
Q+WDTAGQER++++ A+YRGA
Sbjct: 60 QLWDTAGQERFQSLGMAFYRGA 81
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVERWLRELRDHADQN---ILIMLVGNKSD 456
++VY++ S+++VE W +E Q+ ++VGN+ D
Sbjct: 85 VIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID 127
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 54.0 bits (124), Expect = 2e-08
Identities = 20/49 (40%), Positives = 38/49 (77%)
Frame = +3
Query: 105 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
+L KV+++G+SGVGK+S+++++ +F+ + K+TIG +F T+ + VD K
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDK 55
Score = 38.7 bits (86), Expect = 8e-04
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = +2
Query: 263 QIWDTAGQERYRAITSAYYRGA 328
Q+WDTAGQER++++ A+YRGA
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGA 81
Score = 30.7 bits (66), Expect = 0.21
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNKSDL-RHLRSIPTEEAKAF 501
+LVYD+ S+E ++ W E A + +L+GNK D+ R + +A AF
Sbjct: 85 VLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEEQKRMVSKSKALAF 144
Query: 502 AEA 510
+A
Sbjct: 145 CQA 147
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 51.6 bits (118), Expect = 1e-07
Identities = 23/47 (48%), Positives = 35/47 (74%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
K+VL+GDS VGKSSL+ RF +++F+ +STIG F T+++ +D T
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENT 62
Score = 50.4 bits (115), Expect = 2e-07
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL-RHLRSIPTEEAKAFAEA 510
A++VYDI + S E + W++EL+ A + I+I L GNK DL + R++ +A+A+A
Sbjct: 91 AIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAE 150
Query: 511 TDLV 522
+L+
Sbjct: 151 ANLL 154
Score = 40.7 bits (91), Expect = 2e-04
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K +IWDTAGQERY+++ YYR A
Sbjct: 64 VKLEIWDTAGQERYKSLAPMYYRNA 88
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 43.2 bits (97), Expect = 4e-05
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 242
KV +IGDS +GK+SL+ + + F+ ES T+GV F ++I +
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISI 54
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 41.1 bits (92), Expect = 1e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 298 RHHVGVLPRRVGALLVYDIAKHLSYENVERWLRELRDHADQN-ILIMLVGNKSDLRHLRS 474
+H +G+ G +LVY I S+E V+ ++ +H + I++VGNKSDL R+
Sbjct: 73 KHSIGIH----GYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRA 128
Query: 475 IPTEEAKAFA 504
+ EE KA A
Sbjct: 129 VTAEEGKALA 138
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 224 NKKYRGRR*DLKAQIWDTAGQERYRAITSAYYRG 325
N KY+G+ + +I DTAGQ+ Y + S + G
Sbjct: 46 NIKYKGQ--EFATEIIDTAGQDEYSILNSKHSIG 77
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
++ ++G VGKSSL ++ N F TI F +++I+ G+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQ 52
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVE 218
FK+VL+GD G GK++ + R EF + +T+GVE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE 45
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 462
++++D+ ++Y+NV W R+L +NI I+L GNK D++
Sbjct: 86 IIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVK 126
Score = 27.9 bits (59), Expect = 1.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 266 IWDTAGQERYRAITSAYY 319
+WDTAGQE+ + YY
Sbjct: 62 VWDTAGQEKLGGLRDGYY 79
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 35.5 bits (78), Expect = 0.007
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KL 263
K+V++GD GK+SLLS FT F E T+ + + VDGK+ +L
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQL 58
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 266 IWDTAGQERYRAITSAYYRGA 328
+WDTAGQE Y + Y A
Sbjct: 60 LWDTAGQEEYERLRPMSYAKA 80
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 34.3 bits (75), Expect = 0.017
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
+K+V++GD GVGKS+L + ++ F E TI + + E+DG+
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSY-RKKCEIDGE 54
Score = 32.7 bits (71), Expect = 0.051
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNIL-IMLVGNKSDLRHLRSIPTEEAKAFAE 507
G LLVY+I S++ + + +++ D++ ++LV NK DL R + E + A+
Sbjct: 82 GFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAK 141
Query: 508 A 510
+
Sbjct: 142 S 142
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYR 596
GE + S ++ETSA NVE AF +++ I R
Sbjct: 136 GEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRR 171
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 33.9 bits (74), Expect = 0.022
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KL 263
K+V++GD GK+SLL+ FT+ F + TI E I VDG + +L
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIEL 63
Score = 27.9 bits (59), Expect = 1.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYY 319
++ +WDTAGQE Y + S Y
Sbjct: 61 IELSLWDTAGQEEYDQLRSLSY 82
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 31.1 bits (67), Expect = 0.16
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 504 GSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRD 623
G+ GL F+ SA DS + A Q E++RI+S R+MRD
Sbjct: 88 GTKGLIFVVDSA-DSNRISEARQ----ELHRIISDREMRD 122
Score = 26.6 bits (56), Expect = 3.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 251 DLKAQIWDTAGQERYRAITSAYYRG 325
++K +WD GQ++ R + Y+ G
Sbjct: 64 NIKFNVWDVGGQDKIRPLWRHYFTG 88
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 30.7 bits (66), Expect = 0.21
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFA 224
K V++GD VGK+ LL +T N+F + T+ +A
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYA 41
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 29.5 bits (63), Expect = 0.48
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K+V++GD GK+ LL F++ F T+ E +EVDG+
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGR 52
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNE 182
+VV+ GD GVGKSSL+S + +
Sbjct: 5 RVVICGDQGVGKSSLISALIQED 27
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 96 EYDY-LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI--GVEF 221
+YD +F ++G GK++LLS F N N + +T+ VEF
Sbjct: 416 KYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTPNTVVNSVEF 460
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 29.5 bits (63), Expect = 0.48
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K+V++GD GK+ LL F++ F T+ E +EVDG+
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGR 52
Score = 29.5 bits (63), Expect = 0.48
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLRH 465
L+ + + S +NV E+W+ E+ H N+ I+LVG K DLR+
Sbjct: 82 LICFSVDAPESLDNVQEKWISEVL-HFCSNLPILLVGCKVDLRN 124
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 29.5 bits (63), Expect = 0.48
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 296 RAITSAYYRGAWARCSCTISPSTCRTRTWSGGCASCATTPTRTSSSC 436
RA AY G WA + S+ T T S S TT T ++SC
Sbjct: 727 RAWYLAYAAGLWANDAVYYPVSSSSTTTTSTSTGSVTTTSTTATASC 773
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 28.7 bits (61), Expect = 0.84
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 117 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 248
VV+ G SGVGKS+LL R ++ + S R+ E DG
Sbjct: 21 VVVFGPSGVGKSTLLKRLLKDHGDKLGFSVSHTTRTPRAGEKDG 64
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -3
Query: 217 STPMVDL--DSKLNSFLVKRDRRLLLPTPESPMS 122
ST M DL D +++ FL+ R++ +PT + P S
Sbjct: 219 STGMADLSKDDRISRFLILREQSKQIPTQQKPSS 252
>SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1079
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 647 PDDVTLGRVAHLPLRHDPVD 588
P + LGRVA L + H PVD
Sbjct: 987 PQIIELGRVASLEMNHKPVD 1006
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEF 185
K+V++GD G GK+ LL F+ F
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTF 39
Score = 25.4 bits (53), Expect = 7.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYY 319
++ +WDTAGQE Y + Y
Sbjct: 64 IELALWDTAGQEEYDRLRPLSY 85
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 160 RRLLLPTPESPMSTTLNK*SYSSSLVPILVYPE 62
R L+ P+P S +STT+NK + S+ + PE
Sbjct: 6 RILITPSPLSDISTTINKPNVHPSMSLLKALPE 38
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 72 TKMGTREDEYDYL----FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFAT 227
+K G + + +D L +V IG VGKS+LLS T+ + +T EF T
Sbjct: 46 SKSGPKGEGFDVLKSGDARVAFIGFPSVGKSTLLSAITKTK-----SATASYEFTT 96
>SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 290
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 435 HDEDVLVGVVAQLAQPPLHVLVRQVLGD 352
HD+++LVG + QP HV+ +L D
Sbjct: 107 HDQEMLVGPRTKEGQPGYHVVTPFILDD 134
>SPBC887.01 |||acireductone dioxygenase family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 178
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 370 YENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEATDLVL 525
Y+N+ + E H D+ I ++L GN +RS+ + F E DL++
Sbjct: 71 YDNMVKKFFEEHLHEDEEIRLILDGN--GYFDVRSVDDRWVRIFVEKGDLII 120
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSR-FTRNEFNLESKSTIG 212
F V+++G+SG GKS+L++ R+ + KS G
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTG 130
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +1
Query: 391 LRELRDHADQN---ILIMLVGNKSDLRHLRSIPTEEAKAFAEATDLV 522
+RE+RDHA N +L++L L++ + P E +EA + +
Sbjct: 52 IREMRDHAFVNLEKLLLVLTSRLFALKNDKKFPNPETAPASEALNCI 98
>SPBC8D2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 122
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 378 VLVRQVLGDIVHEQRAHAPR 319
VLVR+V G +RAH PR
Sbjct: 65 VLVREVAGSFRQRKRAHMPR 84
>SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 433
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 51 RLKSSG*TKMGTREDEYDYLFKVVLIGDSGVGKSSL 158
+L S+G + E +YD KVV I SG KSSL
Sbjct: 279 KLASTGYEYVCNVETDYDENSKVVSIPHSGPSKSSL 314
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,324,732
Number of Sequences: 5004
Number of extensions: 44825
Number of successful extensions: 234
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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