Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0530
(690 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 119 3e-27
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 118 6e-27
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 101 4e-22
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 75 5e-14
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 74 1e-13
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 69 4e-12
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 62 5e-10
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 56 4e-08
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 55 5e-08
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 55 5e-08
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 54 8e-08
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 54 1e-07
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 52 4e-07
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 51 8e-07
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 51 1e-06
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 50 2e-06
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 48 9e-06
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 47 1e-05
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 47 1e-05
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 46 2e-05
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 46 2e-05
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 46 4e-05
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 44 9e-05
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 43 2e-04
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 42 5e-04
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 42 6e-04
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 41 8e-04
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 40 0.002
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 40 0.002
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 39 0.004
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 38 0.006
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 38 0.010
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 38 0.010
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 37 0.018
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 36 0.023
SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05) 36 0.031
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 36 0.041
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 35 0.071
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 33 0.17
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 33 0.17
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 33 0.17
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 33 0.22
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 33 0.29
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 31 0.88
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 31 0.88
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 31 0.88
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 31 1.2
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 31 1.2
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2) 29 2.7
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 29 3.6
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 29 3.6
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 29 3.6
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011) 29 4.7
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 28 8.2
SB_40957| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 28 8.2
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.2
SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0) 28 8.2
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 119 bits (286), Expect = 3e-27
Identities = 54/65 (83%), Positives = 61/65 (93%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
VGALLVYDIAKHL+YENVERWL+ELRDHAD NI+IMLVGNKSDLRHLR++PT+EAKAFAE
Sbjct: 7 VGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKAFAE 66
Query: 508 ATDLV 522
+V
Sbjct: 67 IYHIV 71
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 585 EIYRIVSQRQMRDPPEGDVIRP--DAEPADVRPSQAD 689
EIY IVSQ+Q+ D P D P + + V P+ D
Sbjct: 66 EIYHIVSQKQIHDSPSSDGSHPSNNVQTIHVAPTTDD 102
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 118 bits (283), Expect = 6e-27
Identities = 56/61 (91%), Positives = 60/61 (98%)
Frame = +3
Query: 78 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT* 257
MGT++DEYDYLFKVVLIGDSGVGKS+LLSRFTRNEFNLESKSTIGVEFATRSI+VDGKT
Sbjct: 1 MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 258 K 260
K
Sbjct: 61 K 61
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 101 bits (243), Expect = 4e-22
Identities = 47/55 (85%), Positives = 53/55 (96%)
Frame = +3
Query: 87 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
R D YDYL+K+VLIGDSGVGKSSLLSRFTRNEF++ESKSTIGVEFATRSI+V+GK
Sbjct: 5 RYDHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGK 59
Score = 81.4 bits (192), Expect = 6e-16
Identities = 32/60 (53%), Positives = 50/60 (83%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
VGA+LVYD+ K ++++VERWL E+R+HAD I++MLVGNK DL+HLR++ +++AK + +
Sbjct: 86 VGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDLKHLRAVASDDAKKYGD 145
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+KAQ+WDTAGQERYRAITSAYYRGA
Sbjct: 61 IKAQVWDTAGQERYRAITSAYYRGA 85
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/55 (74%), Positives = 51/55 (92%)
Frame = +3
Query: 90 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
ED YDYLFK+VLIGDSGVGKS+LLSR+T+NEF+L SK+TIGVE A R++E++GKT
Sbjct: 12 EDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKT 66
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +3
Query: 96 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
EYDYLFK++LIGDSGVGKSSLL RF + F+ STIGV+F R++ VDGKT KL+
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQ 60
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/63 (34%), Positives = 39/63 (61%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
G +L+YD+ + ++ ++ +WL E+ ++A + + +LVGNK DL R + AK FAE
Sbjct: 83 GIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNTAKEFAEK 142
Query: 511 TDL 519
D+
Sbjct: 143 LDI 145
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R +T+AYYR A
Sbjct: 57 IKLQIWDTAGQERFRTLTTAYYRSA 81
Score = 34.3 bits (75), Expect = 0.094
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 516 LSFIETSALDSTNVEPAFQNILTEI 590
+SFIETSA DSTNVE F+ + E+
Sbjct: 145 ISFIETSAKDSTNVESVFRTMAAEL 169
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
+GA+LVYDIAK S+ N+ +W+ ELR HA ++ I+L+GNKSDL+HLR I K FA
Sbjct: 17 MGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRGKQFA 75
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQR------QMRDPPEGDVIRP 650
G+ +G+ F+ETSALDSTNV AF+ I I+ V Q Q + P G+ I
Sbjct: 71 GKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNELEKSGQAHEKPNGESIVI 130
Query: 651 DAEPADV 671
AE A++
Sbjct: 131 KAELAEL 137
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 284 QERYRAITSAYYRGA 328
QERYRAITSAYYRGA
Sbjct: 2 QERYRAITSAYYRGA 16
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 68.9 bits (161), Expect = 4e-12
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSI 477
+GA+LVYDIAK S+ N+ +W+ ELR HA ++ I+L+GNKSDL+HLR I
Sbjct: 17 MGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMI 66
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 284 QERYRAITSAYYRGA 328
QERYRAITSAYYRGA
Sbjct: 2 QERYRAITSAYYRGA 16
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/58 (44%), Positives = 42/58 (72%)
Frame = +3
Query: 93 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
D+Y YLFK++L+GD+ VGK+ L+ +FT+ F TIGV+F ++++VDG+ KL+
Sbjct: 2 DDYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQ 59
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
G ++ YDI S+E++ +WL + + +++LI +VGNKSDL R + AK +
Sbjct: 82 GVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSDLSTNRKVDFHHAKLLLKK 141
Query: 511 TDLV 522
L+
Sbjct: 142 KTLL 145
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R+IT +YY A
Sbjct: 56 VKLQIWDTAGQERFRSITQSYYHNA 80
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = +3
Query: 102 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
DY+FKV+++GD VGKSSL+ RF +EFN + +TIGV+F ++DGK KL+
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQ 62
Score = 41.5 bits (93), Expect = 6e-04
Identities = 14/25 (56%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K Q+WDTAG+E+YRA++ +++RGA
Sbjct: 59 VKLQLWDTAGEEKYRALSRSFFRGA 83
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSD 456
GALLV+D++ S++++ + WL E + + + +LVGNK D
Sbjct: 85 GALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCD 127
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 516 LSFIETSALDSTNVEPAFQNILTEIYRIVSQ 608
LS++ETSA D+TNV AF+ + ++ + Q
Sbjct: 147 LSWLETSAKDNTNVNEAFEAMARKLVENLEQ 177
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +3
Query: 78 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT* 257
M +D Y FKV+++GD GVGK+SL+ RFT+ F S ST+GV+ TR +++ G
Sbjct: 1 MKENDDNCKYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRV 60
Query: 258 KLR 266
KL+
Sbjct: 61 KLQ 63
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHL-RSIPTEEAKAFAEAT 513
+LV+DI ++ ++ +WL ++ + ++NIL +LVGNK+DL+ R + T A AE
Sbjct: 88 ILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKGASRKVNTRSAANLAEFE 147
Query: 514 DLV 522
+L+
Sbjct: 148 ELL 150
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K Q WDTAGQE++R IT +YYR A
Sbjct: 60 VKLQCWDTAGQEKFRGITQSYYRNA 84
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +3
Query: 108 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
+FK+VL GD+ VGKSS + R RN F+ ST+GV+F +++ VDGKT
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKT 490
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 462
G LL+YD+ S+ +V W+ + + + + IML GNK D+R
Sbjct: 517 GVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIR 560
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +2
Query: 263 QIWDTAGQERYRAITSAYYRGA 328
Q+WDTAGQER+R+I +Y+R A
Sbjct: 494 QLWDTAGQERFRSIAKSYFRKA 515
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +3
Query: 96 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 248
+Y Y F+++LIGDS VGKSSLL +FT +F S T+GV+F R +E+ G
Sbjct: 9 KYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKG 59
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQ-NILIMLVGNKSDLRHLRSIPTEEAKAFA 504
VG L++YDI S+ NV W +E + ++ ++ MLVG+K D R + TEE + FA
Sbjct: 88 VGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKIDKESKRVVSTEEGECFA 147
Query: 505 EATDLV 522
EA +++
Sbjct: 148 EAHNMM 153
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYR 322
+K QIWDTAGQER+R+IT +YYR
Sbjct: 63 IKLQIWDTAGQERFRSITYSYYR 85
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEI 590
GE ++ + FIETSA N+E AF ++ E+
Sbjct: 143 GECFAEAHNMMFIETSAKVLCNIEEAFISVAEEV 176
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
GALLVYDI+ ++ ++ WL + R A NI+I+LVGNK DL R + EA FA+
Sbjct: 170 GALLVYDISSRETFNSLTNWLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQE 229
Query: 511 TDLV 522
+L+
Sbjct: 230 NELM 233
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R++T +YYRGA
Sbjct: 144 VKLQIWDTAGQERFRSVTRSYYRGA 168
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 192 ESKSTIGVEFATRSIEVDGKT*KLR 266
+S TIGVEF ++ + V GK+ KL+
Sbjct: 123 DSSHTIGVEFGSKIVNVGGKSVKLQ 147
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/61 (36%), Positives = 39/61 (63%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+G +LVYD+ S+ N+ +WL+++ DHA++++ MLVGNK D+ R I + + A
Sbjct: 30 MGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVGNKCDMYDKRVISQTKGEQLAS 89
Query: 508 A 510
+
Sbjct: 90 S 90
Score = 47.6 bits (108), Expect = 9e-06
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+ IT+AYYRGA
Sbjct: 5 IKLQIWDTAGQERFHTITTAYYRGA 29
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEG 635
GE + S G+SFIETSAL + NVE +F + +I V + + +G
Sbjct: 84 GEQLASSYGISFIETSALSNINVEKSFVVLTEDILNAVCPPTVEETEKG 132
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
G ++VYDI K SY N+ +WL E+ +A + + ++LVGNK DL R + + A+ +A
Sbjct: 394 GVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKIDLDTDREVQPDAAQEWAAL 453
Query: 511 TDL 519
D+
Sbjct: 454 HDM 456
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 269 WDTAGQERYRAITSAYYRGA 328
W+ AGQER+R ITS+YYRGA
Sbjct: 374 WE-AGQERFRTITSSYYRGA 392
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 55.2 bits (127), Expect = 5e-08
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = +3
Query: 48 RRLKSSG*TKMGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFAT 227
R +K S TR + +FKVV IGDSGVGKSS L RF +++ +TIGV+F
Sbjct: 876 RIVKESASQASPTRLKTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQI 935
Query: 228 RSIEVDGK 251
+++ V+G+
Sbjct: 936 KTMNVNGQ 943
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL---RHLRSIPTEEAKAF 501
G L+ YD+ S+ N+++W+ + + A++ + M++GNK+DL R + T + K
Sbjct: 971 GILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNKTDLAEDEESRVVKTIDGKNL 1030
Query: 502 AEATD 516
A D
Sbjct: 1031 ANQYD 1035
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 263 QIWDTAGQERYRAITSAYYRGA 328
Q+WDTAGQER+R+IT Y+R A
Sbjct: 948 QLWDTAGQERFRSITKQYFRKA 969
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 54.8 bits (126), Expect = 6e-08
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 21/78 (26%)
Frame = +3
Query: 96 EYDYLFKVVLIGDSGVGKSSLLSRFT--------------------RNEFNLESK-STIG 212
EYDYLFK++LIGDSGVGKS LL RF +++ ES STIG
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIG 63
Query: 213 VEFATRSIEVDGKT*KLR 266
V+F R+IE+DGKT KL+
Sbjct: 64 VDFKIRTIELDGKTIKLQ 81
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
G ++VYD+ S+ NV++WL+E+ +A +N+ +LVGNK DL + + AK +AE+
Sbjct: 104 GIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAES 163
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R ITS+YYRGA
Sbjct: 78 IKLQIWDTAGQERFRTITSSYYRGA 102
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 507 SNGLSFIETSALDSTNVEPAFQNILTEI 590
S G+ F+ETSA ++TNVE AF + EI
Sbjct: 163 SLGVPFLETSAKNATNVEQAFMTMAAEI 190
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 54.4 bits (125), Expect = 8e-08
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
G +LVYDI + +++N+ +WLR + +HA++++ M++GNK D+ R + E + A
Sbjct: 127 GIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIA 184
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 209
YDYLFK++LIGDSGVGK+ +L RF+ + FN STI
Sbjct: 6 YDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDP 626
GE + +G+ F+ETSA + N+E AFQ + +I + + +P
Sbjct: 180 GEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSEEP 225
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/50 (48%), Positives = 38/50 (76%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KL 263
K++++G+SGVGKSSLL RFT + F+ + +TIGV+F +++ V+G KL
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKL 59
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2
Query: 257 KAQIWDTAGQERYRAITSAYYRGA 328
K IWDTAGQER+R +T +YYRGA
Sbjct: 58 KLAIWDTAGQERFRTLTPSYYRGA 81
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHA-DQNILIMLVGNKSD 456
G +LVYD +++ +E WL E+ ++ ++I+ MLVGNK D
Sbjct: 83 GVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKID 125
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAT 513
A++VYDI ++ + W++EL+ A NI+I L GNK+DL R + E+A+++AE
Sbjct: 97 AIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASKRMVEYEDAQSYAEDN 156
Query: 514 DLV 522
L+
Sbjct: 157 GLL 159
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*K 260
FK+VL+G+S VGKSSL+ RF + +F+ +STIG F T+++ +D T K
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVK 71
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGAWARC---SCTISPSTCRTRTW 382
+K +IWDTAGQERY ++ YYRGA A T + R +TW
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTW 115
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/63 (34%), Positives = 39/63 (61%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAT 513
A+LVYDI ++ ++ W+REL+ + Q+I+I + GNK D R + ++A+ FA +
Sbjct: 36 AILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKADQRDVQVQDAQDFAGSV 95
Query: 514 DLV 522
D +
Sbjct: 96 DAI 98
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 257 KAQIWDTAGQERYRAITSAYYRGAWA 334
K IWDTAGQER++++ YYR A A
Sbjct: 10 KFNIWDTAGQERFKSLAPLYYRDAAA 35
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 51.2 bits (117), Expect = 8e-07
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAK 495
G +LVYDI S+E + W+R + +HA Q++ M++GNK D+ R + E +
Sbjct: 87 GIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGE 141
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/64 (34%), Positives = 38/64 (59%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+G LLVYDI S++++ +WL+ + D+A N+ +L+GNK D R I + ++ E
Sbjct: 3 LGILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGE 62
Query: 508 ATDL 519
+L
Sbjct: 63 DNNL 66
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/59 (35%), Positives = 39/59 (66%)
Frame = +3
Query: 90 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
+ +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ + K KL+
Sbjct: 15 DQNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQ 73
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQERYR IT+AYYRGA
Sbjct: 70 VKLQIWDTAGQERYRTITTAYYRGA 94
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEA 492
G ++ YDI K +++NV RW +++ +A +N + +LVGNK DL R + E+A
Sbjct: 121 GVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLLVGNKKDLEREREVSLEDA 174
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2
Query: 251 DLKAQIWDTAGQERYRAITSAYYR 322
D+K QIWDTAGQER+R IT +YYR
Sbjct: 94 DVKLQIWDTAGQERFRTITQSYYR 117
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 516 LSFIETSALDSTNVEPAFQNILTEI 590
L +ETSA D+TN+E AF + E+
Sbjct: 184 LDVLETSAKDATNIEAAFYRLAREL 208
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
FK+++IGDS VGK+ L R +F +++TIGV+F +S+E++G+ KL+
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQ 98
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +1
Query: 322 RRVGALL-VYDIAKHLSYENVERWLRELRDHA-DQNILIMLVGNKSDLRHLRSIPTEEAK 495
R V A++ +YDI + S+E + W+ E R HA ++ +L+GNK DL R++ + A+
Sbjct: 118 RNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLGLERTVSSNIAR 177
Query: 496 AFAEATDLVL 525
FA++ ++ L
Sbjct: 178 KFADSHNMPL 187
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = +2
Query: 254 LKAQIWDTAGQERYR-AITSAYYR 322
+K Q+WDTAGQER+R ++ YYR
Sbjct: 95 VKLQLWDTAGQERFRKSMVCHYYR 118
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 123 LIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
L D GVGKSSL++RF +F+ +S TIGVEF + +++DG++
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGES 259
Score = 38.3 bits (85), Expect = 0.006
Identities = 13/22 (59%), Positives = 20/22 (90%)
Frame = +2
Query: 263 QIWDTAGQERYRAITSAYYRGA 328
QIWDTAGQER++++ + +YRG+
Sbjct: 263 QIWDTAGQERFKSLRTPFYRGS 284
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNKSDLRHLRSIPTEEAKAF 501
LLVY + S+ N+ W +E +AD N +L+GNK D+ R++ EEA ++
Sbjct: 288 LLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEG-RAVSQEEADSW 345
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 501 RGSNGLSFIETSALDSTNVEPAF 569
R + G+ + ETSA DSTNV AF
Sbjct: 347 RQNGGVPYFETSAKDSTNVNDAF 369
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAT 513
AL+V+DI + S+E+V W++ +RD + +I++VGNK D R + + A+ AE
Sbjct: 239 ALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRRKVSYDVAEKSAERL 298
Query: 514 DL 519
L
Sbjct: 299 GL 300
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 245
K+V +GD GVGKSSL RF + F + + TIG++F T+++ +D
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLD 208
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 251 DLKAQIWDTAGQERYRAITSAYYRGAWA 334
+++ QIWDTAGQER+R + +Y R + A
Sbjct: 211 EVRLQIWDTAGQERFRCLIHSYIRDSEA 238
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRS--IPTEEAKAFA 504
GA++V+D+ S+E V WL ++++H I ++LVGNK+D R L S IP+ A +A
Sbjct: 48 GAVIVFDVTDRKSFERVPTWLDKVQEHCGHEIPVVLVGNKTD-RPLNSWKIPSNVAAKYA 106
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/48 (41%), Positives = 33/48 (68%)
Frame = +3
Query: 108 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
LFKVVL+G++GVGK+SL R N F ++TIG++ ++ +++ K
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEK 58
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 221 CNKKYRGRR*DLKAQIWDTAGQERYRAITSAYYRGAWA 334
C+K + + +WDTAG ER+R +T YYRGA A
Sbjct: 49 CSKFVKIGEKQVTLSVWDTAGVERFRTVTKNYYRGAHA 86
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRG 325
+K QIWDTAGQER+R ITS YYRG
Sbjct: 26 VKLQIWDTAGQERFRTITSTYYRG 49
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/63 (31%), Positives = 38/63 (60%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
G ++VYD+ ++ NV+RWL E+ + D +++ +LVGNK D + + T + + F E
Sbjct: 52 GVIVVYDVTSADTFVNVKRWLHEIDQNCD-DVIRILVGNKDDCPSKKVVETADLQKFGEQ 110
Query: 511 TDL 519
++
Sbjct: 111 MNI 113
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELR--DHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
G LV+DI +++ + RW+ R AD NI ++LVGNK D+ R++ AK FA
Sbjct: 427 GVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVGNKKDMEDNRAVTYSRAKEFA 486
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +3
Query: 84 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLE 194
+R+ +DY FK ++IG+SGVGKS L+++ F+L+
Sbjct: 342 SRQPNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLK 378
Score = 34.3 bits (75), Expect = 0.094
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRG 325
+K I DTAGQERY +I AY+RG
Sbjct: 401 IKLTIGDTAGQERYFSILPAYFRG 424
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
G LLVYDI S++N++ WL +R + Q I+LVGNK D+ R +P + +
Sbjct: 58 GILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDDREVPKRKGEEHVRN 117
Query: 511 TD 516
D
Sbjct: 118 ED 119
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/45 (42%), Positives = 31/45 (68%)
Frame = +3
Query: 102 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 236
++L K + +GDSGVGK+SLL ++T + FN TIG++F + +
Sbjct: 104 EFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRV 148
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = +2
Query: 236 RGRR*DLKAQIWDTAGQERYRAITSAYYRGA 328
RG+R + Q+WDTAGQER+R++T+A++R A
Sbjct: 162 RGQR--IHLQLWDTAGQERFRSLTTAFFRDA 190
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHA 414
+G LLV+D+ S+ N+ WL +L+ HA
Sbjct: 191 MGFLLVFDLTHEQSFVNIRNWLSQLQTHA 219
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +3
Query: 84 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 209
T + +YLFKV++IGD GVGK+SL+ R+ F++ ++T+
Sbjct: 663 TAGERREYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +1
Query: 316 LPRRVGALLVYDIAKHLSYENVE---RWLRELRDHADQNILIMLVGNKSDLRHLRSIPTE 486
L + G ++VY I + ++E + + +RE++ LI+L GNK DL+H R++ +
Sbjct: 191 LSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHCRAVSRQ 250
Query: 487 EAKAFAEATDLV 522
EA+ FA + V
Sbjct: 251 EAREFAAEHECV 262
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEF-ATRSIEVDGKT 254
+ +VL+G +GVGKS+LL RF F E T+ + + + +I+ D T
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPAT 176
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/45 (42%), Positives = 34/45 (75%)
Frame = +3
Query: 117 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
V+L+GDS GK++LL+ + RN+FN + ++T+ +T ++EVDG+
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLST-AVEVDGE 278
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +3
Query: 93 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE 239
++Y FKV+++GD GK S + R+ N ++ K TIGV+FA ++I+
Sbjct: 13 NQYTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQ 61
Score = 35.1 bits (77), Expect = 0.054
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
++ QIW AGQER+ ++T YY+GA
Sbjct: 68 IRLQIWLIAGQERFSSMTRVYYKGA 92
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLR 462
L+ +DIA S+ENV RWL EL DH + +LVGNK DLR
Sbjct: 83 LVCFDIAHRASFENVALRWLPEL-DHFSPGVPRVLVGNKKDLR 124
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +1
Query: 367 SYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEATDLV 522
S++ +W+ ++R +++IMLVGNK+DL R + EE + A+ +++
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVM 64
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRE-LRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
G LLVY + ++ +++ + LR +N+ I+LVGNKSD+ R + T AK F E
Sbjct: 77 GFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSTSNAKTFLE 136
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 245
+KVV++G GVGKS+L +F +F + TI +F + IEVD
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVD 47
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRE-LRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
G LLVY + ++ +++ + LR +N+ I+LVGNKSD+ R + EAK AE
Sbjct: 61 GFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSVGEAKDLAE 120
Query: 508 A 510
A
Sbjct: 121 A 121
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE 239
+KVV++G GVGKS+L +F +F + TI + T E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYHTAGTE 46
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 251 DLKAQIWDTAGQERYRAITSAYYR 322
D++ +WDTAGQE + AIT AYYR
Sbjct: 33 DIRLMLWDTAGQEEFDAITKAYYR 56
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 87 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVE 218
RE++ + KVV++G+ VGKSS++ + L T G E
Sbjct: 2 REEDVEVAIKVVVVGNGAVGKSSMIQSANGEDIRLMLWDTAGQE 45
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 462
A++++D+ ++Y+NV W R+L + +NI I+L GNK D++
Sbjct: 108 AIIMFDVTSRVTYKNVPNWHRDL-ERVCENIPIVLCGNKVDIK 149
Score = 31.5 bits (68), Expect = 0.67
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYY 319
+K +WDTAGQE++ + YY
Sbjct: 81 IKFNVWDTAGQEKFGGLRDGYY 102
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 126 IGDSGVGKSSLLSRFTRNEFNLESKSTIGVE 218
+GD G GK++ + R EF + +T+GVE
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVE 68
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 102 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
D+++++ L+GD GVGK++LL RF + F E TI ++ +SI +D T
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKY-RKSINIDDVT 52
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLR 462
L+ +DI S+EN+E +WL EL H + I LVGNK DLR
Sbjct: 81 LVCFDIGSRTSFENIESKWLPELNHHMPETPKI-LVGNKRDLR 122
Score = 34.7 bits (76), Expect = 0.071
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K+V++GD GVGKS+ L T N F E T+ +++ +I +DGK
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSS-NIMLDGK 51
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVERWLRELRDHA--DQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
++ YD++ S+ +WL R A D N+ L+ K+DL+ R I T++ K +A +
Sbjct: 66 IVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDLKQRRVISTKQGKDYANS 125
Query: 511 TDL 519
+L
Sbjct: 126 KNL 128
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 102 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 212
DYL KV+LIGDS VGK+ LL F E ++ T G
Sbjct: 10 DYLLKVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAG 46
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLR---ELRDHADQ-NILIMLVGNKSDLRHLRSIPTEEAKA 498
G ++VY I + SYE + ++ ++R D I I+LVGNK DLR R + +EA+
Sbjct: 36 GFVVVYSITDYYSYEMARQLVKLVTQVRKTDDICQIPIVLVGNKRDLRRGRCVAKDEARE 95
Query: 499 FA 504
FA
Sbjct: 96 FA 97
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 102 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 212
+ LFKV+++GD+ VGK+S + R+ E K TIG
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLV-GNKSDLRHLRSIPTEEAKAFA 504
G LLV+ + S+E + ++ ++ D+ M++ GNKSDL + R++ T E + A
Sbjct: 85 GFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDLEYERTVSTAEGQELA 143
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +2
Query: 266 IWDTAGQERYRAITSAYYRGA 328
IWDTAGQER++++ A+YRGA
Sbjct: 1 IWDTAGQERFQSLGVAFYRGA 21
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 510 NGLSFIETSALDSTNVEPAFQNI 578
N + + ETSA ++ NVE AFQ I
Sbjct: 87 NDIPYFETSAKEAINVEQAFQTI 109
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 108 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 212
+F+VV++G GVGK+SL+ RF F+ + T+G
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG 141
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 36.3 bits (80), Expect = 0.023
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELR----DHADQNILIMLV-GNKSDLRHLRSIPTEEAK 495
GALLVYD+ S+E ++ WL E++ +D N ++ +V NK D R R + E +
Sbjct: 16 GALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVDSRK-RLVEESEGR 74
Query: 496 AFAE 507
+AE
Sbjct: 75 QWAE 78
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 36.3 bits (80), Expect = 0.023
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRPDAEPAD 668
G+ + GL F ETSA D+TNV+ F+ ++ I +SQ DP +PD +
Sbjct: 35 GKQLADQLGLEFYETSAKDNTNVKKVFERLVDIICDKMSQSLDTDPTIVSGQKPDMKYTP 94
Query: 669 VRPSQ 683
V Q
Sbjct: 95 VHRHQ 99
>SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05)
Length = 138
Score = 35.9 bits (79), Expect = 0.031
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVERWLREL--RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
L++Y I S++ R R L R + +LI L+G K DL HLR I E AE
Sbjct: 3 LILYSIVDRTSFDEASRIARYLKWRKFPETGVLI-LIGTKRDLGHLREIDETEGSELAE 60
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLREL-RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
G +++Y I S+ ++ ++ R +I I+LVGNK DL R + T+E + A
Sbjct: 11 GFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQEGQELAH 70
Query: 508 ATD 516
D
Sbjct: 71 RFD 73
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 34.7 bits (76), Expect = 0.071
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAT 513
LL +DI+ ++E +E +WL E +I + L+GNK+D+R R K ++
Sbjct: 80 LLCFDISNRQTFERIESKWLPETTQVLPGSIRV-LIGNKNDIRKTRQDKDRRGKVLKMSS 138
Query: 514 DLVL 525
+ V+
Sbjct: 139 NSVI 142
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNE 182
KVVL GD+ VGK+S L T+NE
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQNE 30
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 462
L+ + I S EN+ E+W E++ H N+ I+LVGNK DLR
Sbjct: 6005 LMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLR 6046
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K+V++GD GK+ LL F++++F T+ E IEVDGK
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGK 5975
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 34.3 bits (75), Expect = 0.094
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 96 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
E D KVV +GD VGK+S L T + F ++I + ++++E+DGK
Sbjct: 5 ELDPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGK 55
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLR 462
LL +DIA S+ N+E WL + + ++ +LVGNK +LR
Sbjct: 85 LLCFDIANRESFANIESTWLPHV-NLETSDVPKVLVGNKMELR 126
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 108 LFKVVLIGDSGVGKSSLLSRFTRNEF 185
+F++ ++G GVGKSS+ R+ +NEF
Sbjct: 2598 MFRLCVVGSGGVGKSSVTIRYLKNEF 2623
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 248
+K+ ++G GVGK+SLL F ++F+ + T+ ++ S+ +DG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDG 57
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 102 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKS 203
D ++K+ L G GVGK+S+ +R + +EF E +S
Sbjct: 6 DEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQS 39
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 218 ICNKKYRGRR*DLKAQIWDTAGQERYRAITSAYY 319
ICNKK LK +WDT G E Y ++T +Y
Sbjct: 53 ICNKK-------LKIHLWDTLGMEEYESLTRNHY 79
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 108 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 209
+ KVV+IG+ GVGKS+L RF F E T+
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTL 894
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +3
Query: 51 RLKSSG*TKMGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR 230
RLK + +MG+ D FK+ ++G S VGK+SL+ + F E TI ++
Sbjct: 170 RLKMTSNIQMGSGLPPVD--FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIH 226
Query: 231 SIEVDG 248
++ DG
Sbjct: 227 ALNQDG 232
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFA 224
K V++GD VGK+ LL +T N+F E T+ +A
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA 41
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 31.1 bits (67), Expect = 0.88
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSR 167
+KVVL+GD+GVGKS ++ R
Sbjct: 14 YKVVLVGDAGVGKSFVIDR 32
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 212
+VV++G GVGKS+L R F E ST+G
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 31.1 bits (67), Expect = 0.88
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELR 405
GALLVYD+ S+E ++ WL E++
Sbjct: 11 GALLVYDVTSRESFEALDIWLDEIK 35
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 31.1 bits (67), Expect = 0.88
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 105 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 245
Y +++LIG GK+SL F+ + +ST G+E EVD
Sbjct: 360 YRGRIMLIGQDRAGKTSLKKSLLGLRFDPQEESTEGIEVDPSRFEVD 406
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 212
+ +V++G +GVGK++L+ RF F E T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLRYG 272
F V+++G+SG+GKS+LL+ + S E +++EV T +L+ G
Sbjct: 25 FTVMVVGESGLGKSTLLNSLFLTDLYTPSSYPSIKEKLNKTVEVKPCTVELKEG 78
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/18 (55%), Positives = 18/18 (100%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSR 167
K+VL+GD+G+GKS+L+++
Sbjct: 7 KLVLVGDAGIGKSTLIAK 24
>SB_23422| Best HMM Match : Propeptide_C1 (HMM E-Value=7.2)
Length = 628
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 200 IYHRCGICNKKYRGRR-*DLK-AQIWDTAGQERYRAI 304
+Y+ G+C + YR RR D+K I T GQ ++RAI
Sbjct: 217 VYYTIGVCVRGYRPRRGDDVKVTAIESTQGQSKWRAI 253
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 105 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 245
Y +++LIG GK+SL F+ ST G+E + EVD
Sbjct: 358 YRGRIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVD 404
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 78 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 236
+G R Y + ++G+ VGKSSL+ F F E TI EF ++ +
Sbjct: 17 LGKRSSAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI-EEFVSKHL 68
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEF 185
K V++GD GVGK+SLL + + F
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGF 43
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 337 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTE 486
++ + + S+ NV +W+ E+R+ + +I LVG SDL+ I TE
Sbjct: 94 IVCFSVVSPTSFANVASKWIPEIREFQPKAPII-LVGTHSDLKDCYKILTE 143
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 266 IWDTAGQERYRAITSAYYRG 325
+WD GQ++ RA+ YY+G
Sbjct: 44 VWDIGGQDKIRALWRVYYQG 63
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 272 DTAGQERYRAITSAYYRGAWA 334
DTAG+E+Y ++S Y RGA A
Sbjct: 278 DTAGEEKYAGLSSFYCRGASA 298
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL 459
A++ YDI K S + + L A+ N L+++VG K DL
Sbjct: 299 AIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCKKDL 340
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 105 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 245
Y +++LIG GK+SL F+ ST G+E + EVD
Sbjct: 289 YRGRIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVD 335
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 212
++ ++GDSGVGK+SL+ E + TIG
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIG 40
>SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)
Length = 972
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 314 YYRGAWARCSCTISPSTCRTRTWSGGCASCATTPTRTSSSCWSATRAISDIL 469
YY + CSCT + +T T + A+ A T T T+++ + T + I+
Sbjct: 512 YYCCYYCCCSCTATTATATTTATATTTATTAATATTTTTTTTTNTTTNTTII 563
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSR--FTRNEFNLESKSTIGVEFATRSIEVDGKT*KL 263
++V++GDS VGK+ LL + + N + + +I + +I VDGK KL
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVA-NIIVDGKVYKL 70
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 105 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 245
Y +++LIG GK+SL F+ ST G+E + EVD
Sbjct: 80 YRGRIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVD 126
>SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3296
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 432 DEDVLVGVVAQLAQPPLHVLVRQVLGDIVHEQRAHAP 322
DE+VL+G + L L L D+VH R H P
Sbjct: 249 DEEVLIGT-GWTTKESLRPLTYSTLADLVHHVRTHLP 284
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFN 188
KVVL+G GK+SL+ R+ + FN
Sbjct: 29 KVVLLGKEYSGKTSLVERYLHHRFN 53
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
F ++++G+SG+GKS+L+ + + K E ++++++ T
Sbjct: 25 FTLMVVGESGLGKSTLIDSLFLTDLYSDRKILSAEERIKKTVKIETST 72
>SB_40957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 326 AWARCSCTISPSTCRTRTWSGGCASCATTPTRTSSSCWS--ATRAIS 460
A+ R CT+S C TRT S S + TRT SS W TR +S
Sbjct: 259 AYLRTWCTVSSCNCSTRTLS----SWGNSSTRTLSS-WGDRGTRTLS 300
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 236 RGRR*DLKAQIWDTAGQERYRAITSAYYR 322
+G + K I DTAGQE Y A+ Y R
Sbjct: 271 KGGKNKSKTDILDTAGQEEYSAMRDQYMR 299
>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 6074
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 420 LVGVVAQLAQPPLHVLVRQVLGDIVHEQRAHAPR 319
LV +V + PPL + R V+ IV HAPR
Sbjct: 2359 LVLIVTDMGIPPLESIKRMVVNVIVSGVNEHAPR 2392
>SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0)
Length = 1301
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 117 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLRYG 272
V L+G+SG GKS+++ + + ++ E+ S IGV ++ +RYG
Sbjct: 683 VALVGESGCGKSTVI-KLIQRFYDPENGSRIGVVSQEPALFATTIAENIRYG 733
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,977,795
Number of Sequences: 59808
Number of extensions: 363731
Number of successful extensions: 1653
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1645
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -