Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0530
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 117 9e-27
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 113 1e-25
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 89 3e-18
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 75 5e-14
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 75 5e-14
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 72 3e-13
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 71 8e-13
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 71 8e-13
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 71 8e-13
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 68 7e-12
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 68 7e-12
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 68 7e-12
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 66 2e-11
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 64 9e-11
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 64 9e-11
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 63 2e-10
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 63 2e-10
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 62 4e-10
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 60 1e-09
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 60 1e-09
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 58 8e-09
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 56 3e-08
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 56 3e-08
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 54 7e-08
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 54 1e-07
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 54 1e-07
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 52 4e-07
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 51 7e-07
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 51 7e-07
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 51 7e-07
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 51 7e-07
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 51 7e-07
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 51 7e-07
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 51 9e-07
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 50 1e-06
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 50 2e-06
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 46 3e-05
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 46 3e-05
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 45 4e-05
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 45 6e-05
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 44 1e-04
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 39 0.003
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 38 0.009
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 38 0.009
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 36 0.027
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 36 0.027
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 36 0.036
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 35 0.048
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 35 0.048
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 35 0.048
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 35 0.048
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 35 0.048
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 35 0.063
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 34 0.083
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 34 0.11
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 34 0.11
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 34 0.11
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z73422-14|CAD37351.1| 441|Caenorhabditis elegans Hypothetical p... 33 0.15
Z73422-13|CAA97773.2| 443|Caenorhabditis elegans Hypothetical p... 33 0.15
Z70307-16|CAC42262.2| 441|Caenorhabditis elegans Hypothetical p... 33 0.15
Z70307-15|CAA94342.2| 443|Caenorhabditis elegans Hypothetical p... 33 0.15
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 33 0.15
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 33 0.19
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 33 0.19
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 33 0.25
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 32 0.34
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 32 0.34
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 32 0.34
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 32 0.34
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 32 0.34
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 32 0.34
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 32 0.34
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 32 0.34
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 32 0.44
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 32 0.44
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 32 0.44
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 30 1.4
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 29 3.1
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 29 3.1
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 29 3.1
AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical ... 29 4.1
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 28 5.5
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 28 5.5
U64848-10|AAB04888.1| 168|Caenorhabditis elegans Hypothetical p... 28 5.5
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 28 7.2
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 28 7.2
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 28 7.2
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical pr... 27 9.6
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 117 bits (281), Expect = 9e-27
Identities = 52/64 (81%), Positives = 60/64 (93%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
VGALLVYDIAKH++YENVERWL+ELRDHADQNI+IMLVGNKSDLRHLR++PT+EAK +AE
Sbjct: 85 VGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAE 144
Query: 508 ATDL 519
L
Sbjct: 145 RNQL 148
Score = 115 bits (276), Expect = 4e-26
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = +3
Query: 78 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT* 257
MG+R+DEYDYLFKVVLIGDSGVGKS+LLSRFTRNEFNLESKSTIGVEFATRSI V+GKT
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTV 60
Query: 258 K 260
K
Sbjct: 61 K 61
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +3
Query: 510 NGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEG 635
N LSFIETSALDSTNVE AF NILTEIY+ VS + + +G
Sbjct: 146 NQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTDRQG 187
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+KAQIWDTAGQERYRAITSAYYRGA
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGA 84
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 113 bits (271), Expect = 1e-25
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +3
Query: 78 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT* 257
MG+R+DEYDYLFKVVLIGDSGVGKS+LLSRFTRNEF+LESKSTIGVEFATRSI V+GKT
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTV 60
Query: 258 K 260
K
Sbjct: 61 K 61
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSD 456
VGALLVYDIAKH++YENVERWL+ELRDHADQNI+IM VGNK D
Sbjct: 85 VGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+KAQIWDTAGQERYRAITSAYYRGA
Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGA 84
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = +3
Query: 93 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
+EY YLFK+VLIG+ GVGKS+LLSRFTRNEFNL+SK TIGVEFAT+ I V+GK K++
Sbjct: 3 NEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQ 60
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/60 (65%), Positives = 53/60 (88%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+GALLVYDI+KH +YE+VE+WL+ LRDHA+++I+I LVGNKSDL H ++PT+EAK +AE
Sbjct: 82 LGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLSH--AVPTDEAKIYAE 139
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 510 NGLSFIETSALDSTNVEPAFQNILTEIYRIVSQR 611
N +SFIETSALD+TNVE AF NI+TEIY++VS++
Sbjct: 141 NHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 174
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAG ER+R S+YYRGA
Sbjct: 57 VKVQIWDTAGMERFRCGASSYYRGA 81
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +3
Query: 78 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT* 257
M EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+IE+DGKT
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60
Query: 258 KLR 266
KL+
Sbjct: 61 KLQ 63
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +3
Query: 78 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT* 257
M EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+IE+DGKT
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60
Query: 258 KLR 266
KL+
Sbjct: 61 KLQ 63
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
G ++VYDI ++ NV++WL+E+ +A +N+ +LVGNK DL R++ T+ A+ +A
Sbjct: 86 GIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVETQAAQDYA 143
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R ITS+YYRGA
Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGA 84
Score = 34.3 bits (75), Expect = 0.083
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 504 GSNGLSFIETSALDSTNVEPAFQNILTEI 590
G G+ F+ETSA STNVE AF + +EI
Sbjct: 144 GQLGIPFLETSAKSSTNVEQAFLTMASEI 172
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/64 (50%), Positives = 46/64 (71%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+GALLVYDI S+ ++E+WL +LR H ++IML+GNKSDL+ +R + TEE +AFA+
Sbjct: 80 LGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLKAVRDVTTEEGEAFAK 139
Query: 508 ATDL 519
L
Sbjct: 140 KNGL 143
Score = 55.6 bits (128), Expect = 3e-08
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 102 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
D++FK V+IGD GVGKS+LL RFT F+ +T+GVEF + +++D +LR
Sbjct: 4 DHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLR 58
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGAWARCSCTISPSTCR 370
++ ++WDT GQE +R+I AYYR A + + TCR
Sbjct: 55 VRLRVWDTCGQENFRSIIRAYYRNALG--ALLVYDITCR 91
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYR 596
GE+ NGL+F+ETSA + +VE AF N EIY+
Sbjct: 134 GEAFAKKNGLTFMETSAKANKHVEKAFVNTAHEIYK 169
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
YDYLFK++LIGDSGVGK+ +L RF+ + FN STIG++F R+IE+DGK KL+
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R IT+AYYRGA
Sbjct: 57 IKLQIWDTAGQERFRTITTAYYRGA 81
Score = 48.4 bits (110), Expect = 5e-06
Identities = 17/41 (41%), Positives = 29/41 (70%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNK 450
+G +LVYDI S+EN++ W+R + +HA ++ M++GNK
Sbjct: 82 MGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
YDYLFK++LIGDSGVGK+ +L RF+ + FN STIG++F R+IE+DGK KL+
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Score = 55.2 bits (127), Expect = 4e-08
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
+G +LVYDI S+EN++ W+R + +HA ++ M++GNK D+ R + + + A
Sbjct: 82 MGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLA 140
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R IT+AYYRGA
Sbjct: 57 IKLQIWDTAGQERFRTITTAYYRGA 81
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMR 620
GE + G F+ETSA + N++ AF + +I + Q +MR
Sbjct: 136 GEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMR 179
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
YDYLFK++LIGDSGVGK+ +L RF+ + FN STIG++F R+IE+DGK KL+
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Score = 55.2 bits (127), Expect = 4e-08
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
+G +LVYDI S+EN++ W+R + +HA ++ M++GNK D+ R + + + A
Sbjct: 82 MGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLA 140
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R IT+AYYRGA
Sbjct: 57 IKLQIWDTAGQERFRTITTAYYRGA 81
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMR 620
GE + G F+ETSA + N++ AF + +I + Q +MR
Sbjct: 136 GEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMR 179
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 67.7 bits (158), Expect = 7e-12
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
GALLVYDI + ++ ++ WL + R H++ N++IML+GNKSDL R + EE +AFA
Sbjct: 81 GALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVKREEGEAFARE 140
Query: 511 TDLV 522
LV
Sbjct: 141 HGLV 144
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DGK KL+
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQ 58
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQE +R+IT +YYRGA
Sbjct: 55 IKLQIWDTAGQESFRSITRSYYRGA 79
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQ 608
GE+ +GL F+ETSA + NVE AF + EIYR + +
Sbjct: 134 GEAFAREHGLVFMETSAKTAANVEEAFIDTAKEIYRKIQE 173
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/62 (53%), Positives = 48/62 (77%)
Frame = +3
Query: 81 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*K 260
GTR+ YD+LFK+++IGDSGVGKSSLL RF N F+ +TIGV+F R+++++G+ K
Sbjct: 3 GTRD--YDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVK 60
Query: 261 LR 266
L+
Sbjct: 61 LQ 62
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/62 (53%), Positives = 48/62 (77%)
Frame = +3
Query: 81 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*K 260
GTR+ YD+LFK+++IGDSGVGKSSLL RF N F+ +TIGV+F R+++++G+ K
Sbjct: 3 GTRD--YDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVK 60
Query: 261 LR 266
L+
Sbjct: 61 LQ 62
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRG 325
+K QIWDTAGQER+R ITS YYRG
Sbjct: 59 VKLQIWDTAGQERFRTITSTYYRG 82
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/63 (31%), Positives = 41/63 (65%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
G ++VYD+ S+ NV+RWL+E+ ++ D ++ +LVGNK + R + +A+ +A++
Sbjct: 85 GVVVVYDVTNGESFGNVKRWLQEIENNCD-SVQKVLVGNKCEENERRVVLESDARNYAQS 143
Query: 511 TDL 519
++
Sbjct: 144 MNI 146
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 507 SNGLSFIETSALDSTNVEPAF 569
S +SF ETSA + NVEP F
Sbjct: 143 SMNISFFETSAKEDKNVEPMF 163
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ KL+
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 63
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
GAL+VYDI + +Y ++ WL + + + N I L+GNK+DL R +P EEAKAFAE
Sbjct: 86 GALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPYEEAKAFAEE 145
Query: 511 TDL 519
L
Sbjct: 146 NGL 148
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+RA+T +YYRGA
Sbjct: 60 IKLQIWDTAGQERFRAVTRSYYRGA 84
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 510 NGLSFIETSALDSTNVEPAFQNILTEIYR 596
NGL+F+E SA +NVE AF +IY+
Sbjct: 146 NGLTFLECSAKTGSNVEDAFLETAKQIYQ 174
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ KL+
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 63
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F ++IE+ GK KL+
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Score = 56.0 bits (129), Expect = 2e-08
Identities = 21/60 (35%), Positives = 39/60 (65%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+G +LVYDI S++N+ +WLR + +HA ++++ M++GNK D+ R + E + A+
Sbjct: 83 MGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQ 142
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+ IT++YYRGA
Sbjct: 58 IKLQIWDTAGQERFHTITTSYYRGA 82
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRP 650
GE + +G+SF ETSA + +V+ AF ++ I + D D + P
Sbjct: 137 GEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAI--LAKMPDSTDEQSRDTVNP 188
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F ++IE+ GK KL+
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Score = 48.8 bits (111), Expect = 4e-06
Identities = 17/41 (41%), Positives = 31/41 (75%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNK 450
+G +LVYDI S++N+ +WLR + +HA ++++ M++GNK
Sbjct: 83 MGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNK 123
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+ IT++YYRGA
Sbjct: 58 IKLQIWDTAGQERFHTITTSYYRGA 82
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+GALLVYDI S+ ++E WL +L+ D +I+I+L+GNKSDL R + EE +AFA
Sbjct: 80 IGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREVRKEEGEAFAR 139
Query: 508 ATDLV 522
L+
Sbjct: 140 EFGLI 144
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +3
Query: 102 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KL 263
D++FK V+IGD GVGKS+LL RF F+ ST+G+EF R++E+D K KL
Sbjct: 4 DHVFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKL 57
Score = 37.9 bits (84), Expect = 0.007
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K +WDT GQER+R++ +YYR A
Sbjct: 55 VKLHVWDTCGQERFRSLVGSYYRHA 79
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYR 596
GE+ GL F+E SA + VE AF N EIYR
Sbjct: 134 GEAFAREFGLIFMEISAKTNEYVEEAFVNSAHEIYR 169
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +3
Query: 90 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
+D +DYLFK+VL+GD GVGK+ ++ RF F +TIGV+F +++ VDGK KL+
Sbjct: 4 DDGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQ 62
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +3
Query: 90 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
+D +DYLFK+VL+GD GVGK+ ++ RF F +TIGV+F +++ VDGK KL+
Sbjct: 4 DDGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQ 62
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
G +L YDI S+ +++RW+ ++ A N++ +L+G K DL R+I EEA+ A
Sbjct: 85 GIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIEAEEAEMLQRA 144
Query: 511 TDL 519
+
Sbjct: 145 NGM 147
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDT GQER+R IT +YYR A
Sbjct: 59 VKLQIWDTGGQERFRTITQSYYRSA 83
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DGK KL+
Sbjct: 3 YAYLFKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQ 58
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
LLVYDIA S+EN WL +++++ + + + LVGNK DL R++PT+E K AEA
Sbjct: 80 LLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDLP--RAVPTDEGKRLAEA 135
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R++T++YYR A
Sbjct: 52 VKLQIWDTAGQERFRSVTTSYYRDA 76
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEF-NLESKSTIGVEFATRSIEVDGKT*KLR 266
KV+L+GDS GK+ LL R+ F N ST+G+++ + I + K KL+
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQ 55
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/58 (46%), Positives = 39/58 (67%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
LLVYDIA S+EN WL +++++ + + + LVGNK DL R++PT+E K AEA
Sbjct: 80 LLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDLP--RAVPTDEGKRLAEA 135
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/25 (68%), Positives = 23/25 (92%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K QIWDTAGQER+R++T++YYR A
Sbjct: 52 VKLQIWDTAGQERFRSVTTSYYRDA 76
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEF-NLESKSTIGVEFATRSIEVDGKT*KLR 266
KV+L+GDS GK+ LL R+ F N ST+G+++ + I + K KL+
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQ 55
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/63 (39%), Positives = 42/63 (66%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAT 513
A++VYDI S++ + W++EL+ A NI++ L GNK+D+ + R++ EEA A+AE
Sbjct: 95 AIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEANAYAEDN 154
Query: 514 DLV 522
L+
Sbjct: 155 ALL 157
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*K 260
FK+VL+G+S VGKSSL+ RF + +F+ +STIG F T+++ +D T K
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIK 69
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGAWA 334
+K +IWDTAGQERY ++ YYRGA A
Sbjct: 68 IKFEIWDTAGQERYHSLAPMYYRGAQA 94
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/49 (44%), Positives = 37/49 (75%)
Frame = +3
Query: 108 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
L KV+++GDSGVGK+SL++++ F+ + K+TIG +F TR + +D +T
Sbjct: 9 LLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRT 57
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +2
Query: 263 QIWDTAGQERYRAITSAYYRGA 328
QIWDTAGQER++++ A+YRGA
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGA 82
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVER-WLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
G + VYD+ S+EN+E+ WL+E++ HA N ++MLVGNK+D+ R + + A+ A
Sbjct: 81 GVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDFDRAEKLA 139
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/48 (43%), Positives = 35/48 (72%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 242
Y++LFK+V++GD GKS +L RF N F ++ ST+GV+F ++I++
Sbjct: 3 YNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKL 50
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
++ ++WDTAG ERYR I ++YY A
Sbjct: 55 IRLELWDTAGMERYRTIYNSYYHSA 79
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +3
Query: 93 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
++Y YLFKVVL+G++GVGK+ L+ +FT+ F +TIGV+F ++++V KL+
Sbjct: 2 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQ 59
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGAWA 334
+K QIWDTAGQER+R+IT +YYR A A
Sbjct: 56 IKLQIWDTAGQERFRSITQSYYRSAHA 82
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/57 (33%), Positives = 35/57 (61%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+LVYD++ S++ + WL E+ +A++ +L +LVGNK D R +P + F++
Sbjct: 84 VLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIGRDFSD 140
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 522 FIETSALDSTNVEPAFQNILTEI 590
F+ETSALD+TNV+ F+ + T +
Sbjct: 147 FLETSALDATNVDQLFEQVATRL 169
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +3
Query: 84 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
T D+ Y KV++IGD GVGK+S++ RF N F+ K+TIGV+FA + + VD T
Sbjct: 5 TNNDKISY--KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENT 59
Score = 34.7 bits (76), Expect = 0.063
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 263 QIWDTAGQERYRAITSAYYRGAWARCSCTISPSTCRTRTWSG 388
QIWD +GQ+RY +T YY+ A A + + ST R RT G
Sbjct: 64 QIWDISGQDRYGVMTRVYYKDAHA--AIIVLDST-RERTIEG 102
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +3
Query: 84 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
T D+ Y KV++IGD GVGK+S++ RF N F+ K+TIGV+FA + + VD T
Sbjct: 5 TNNDKISY--KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENT 59
Score = 34.7 bits (76), Expect = 0.063
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 263 QIWDTAGQERYRAITSAYYRGAWARCSCTISPSTCRTRTWSG 388
QIWD +GQ+RY +T YY+ A A + + ST R RT G
Sbjct: 64 QIWDISGQDRYGVMTRVYYKDAHA--AIIVLDST-RERTIEG 102
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KL 263
K+++IG+SGVGKSSL+ RF + F+ E +TIGV+F S+ +DG KL
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKL 62
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K IWDTAGQER+R +T +YYRGA
Sbjct: 60 VKLAIWDTAGQERFRTLTPSYYRGA 84
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDH-ADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
G + VYD+ S+E + W++E+ + + NI+ M+V NK D+ + R + EE FA+
Sbjct: 86 GVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMPN-RVVTREEGLKFAK 144
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +3
Query: 96 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 236
+YDYL K + +GDSGVGK+S L R+T N F + ST+G++F + +
Sbjct: 3 DYDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKV 49
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHA-DQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
+G +L++DI S+ N+ WL +L+ HA + I++ GNK+DL + R + T AK A
Sbjct: 90 MGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLA 149
Query: 505 EATDL 519
+ L
Sbjct: 150 DQLGL 154
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = +2
Query: 236 RGRR*DLKAQIWDTAGQERYRAITSAYYRGA 328
RG+R + Q+WDTAGQER+R++T+A++R A
Sbjct: 61 RGQR--VLLQLWDTAGQERFRSLTTAFFRDA 89
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 513 GLSFIETSALDSTNVEPAFQNILTEIYRIVSQ 608
GL + ETSA STNVE + +L + + + Q
Sbjct: 153 GLPYFETSACTSTNVEKSVDCLLDLVMQRIQQ 184
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +3
Query: 96 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 236
+YDYL K + +GDSGVGK+S L R+T N F + ST+G++F + +
Sbjct: 3 DYDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKV 49
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHA-DQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
+G +L++DI S+ N+ WL +L+ HA + I++ GNK+DL + R + T AK A
Sbjct: 90 MGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLA 149
Query: 505 EATDL 519
+ L
Sbjct: 150 DQLGL 154
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = +2
Query: 236 RGRR*DLKAQIWDTAGQERYRAITSAYYRGA 328
RG+R + Q+WDTAGQER+R++T+A++R A
Sbjct: 61 RGQR--VLLQLWDTAGQERFRSLTTAFFRDA 89
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 513 GLSFIETSALDSTNVEPAFQNILTEIYRIVSQ 608
GL + ETSA STNVE + +L + + + Q
Sbjct: 153 GLPYFETSACTSTNVEKSVDCLLDLVMQRIQQ 184
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +1
Query: 283 AGAVPRHHVGVLPRRV--GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSD 456
AG H +G + R G LLV+DI S+E V+ W+ E++ I++VGNK D
Sbjct: 69 AGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKID 128
Query: 457 LRHLRSIPTEEAKAFAEA 510
L R + ++A+A+AE+
Sbjct: 129 LEEERQVTRQDAEAYAES 146
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +3
Query: 84 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 245
T D+ + FK+VL+G+ VGKSSL+ RF N+F+ + STI F +++ V+
Sbjct: 4 TNVDQKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVE 57
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 266 IWDTAGQERYRAITSAYYRGA 328
IWDTAGQE+Y A+ YYRG+
Sbjct: 65 IWDTAGQEKYHALGPIYYRGS 85
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 492 ESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIR 647
E+ S G ++ETSA D+ + AF+++ ++ R P IR
Sbjct: 141 EAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSRTRSTEPPSTNRSIR 192
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/50 (44%), Positives = 37/50 (74%)
Frame = +3
Query: 93 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 242
++Y YLFKVVL+ ++GVGK+ L+ +FT+ F +TIGV+F ++++V
Sbjct: 2 EDYKYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKV 51
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2
Query: 233 YRGRR*DLKAQIWDTAGQERYRAITSAYYRGA 328
+RG + +K QIWDTAGQERYR IT+AYYRGA
Sbjct: 65 FRGDK-RVKLQIWDTAGQERYRTITTAYYRGA 95
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +3
Query: 81 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*K 260
G + +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ K K
Sbjct: 13 GQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVK 72
Query: 261 LR 266
L+
Sbjct: 73 LQ 74
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/64 (28%), Positives = 37/64 (57%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+G +L+YDI S+ +V+ W +++ ++ +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 508 ATDL 519
L
Sbjct: 156 QLGL 159
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRPDAEPAD 668
G + GL F ETSA ++ NV+ F+ ++ I +++ +DP + +P + +
Sbjct: 150 GRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQ----QPKGQKLE 205
Query: 669 VRPSQ 683
P+Q
Sbjct: 206 ANPTQ 210
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2
Query: 233 YRGRR*DLKAQIWDTAGQERYRAITSAYYRGA 328
+RG + +K QIWDTAGQERYR IT+AYYRGA
Sbjct: 65 FRGDK-RVKLQIWDTAGQERYRTITTAYYRGA 95
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +3
Query: 81 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*K 260
G + +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ K K
Sbjct: 13 GQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVK 72
Query: 261 LR 266
L+
Sbjct: 73 LQ 74
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/64 (28%), Positives = 37/64 (57%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+G +L+YDI S+ +V+ W +++ ++ +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 508 ATDL 519
L
Sbjct: 156 QLGL 159
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRPDAEPAD 668
G + GL F ETSA ++ NV+ F+ ++ I +++ +DP + +P + +
Sbjct: 150 GRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQ----QPKGQKLE 205
Query: 669 VRPSQ 683
P+Q
Sbjct: 206 ANPTQ 210
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/63 (33%), Positives = 39/63 (61%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAT 513
A++VYDI S+ +W+ ++R +++IMLVGNK+DL R + T+E + A+
Sbjct: 86 AVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGERKAKEL 145
Query: 514 DLV 522
+++
Sbjct: 146 NVM 148
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/52 (34%), Positives = 39/52 (75%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
FK+V +G+ VGK+SL++RF + F+ ++TIG++F ++++ ++ +T +L+
Sbjct: 11 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQ 62
Score = 35.1 bits (77), Expect = 0.048
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYR 322
++ Q+WDTAGQER+R++ +Y R
Sbjct: 59 VRLQLWDTAGQERFRSLIPSYIR 81
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2
Query: 233 YRGRR*DLKAQIWDTAGQERYRAITSAYYRGA 328
+RG + +K QIWDTAGQERYR IT+AYYRGA
Sbjct: 65 FRGDK-RVKLQIWDTAGQERYRTITTAYYRGA 95
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +3
Query: 81 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*K 260
G + +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ K K
Sbjct: 13 GQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVK 72
Query: 261 LR 266
L+
Sbjct: 73 LQ 74
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/64 (28%), Positives = 37/64 (57%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+G +L+YDI S+ +V+ W +++ ++ +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 508 ATDL 519
L
Sbjct: 156 QLGL 159
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRPDAEPAD 668
G + GL F ETSA ++ NV+ F+ ++ I +++ +DP + +P + +
Sbjct: 150 GRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQ----QPKGQKLE 205
Query: 669 VRPSQ 683
P+Q
Sbjct: 206 ANPTQ 210
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2
Query: 233 YRGRR*DLKAQIWDTAGQERYRAITSAYYRGA 328
+RG + +K QIWDTAGQERYR IT+AYYRGA
Sbjct: 79 FRGDK-RVKLQIWDTAGQERYRTITTAYYRGA 109
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +3
Query: 81 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*K 260
G + +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ K K
Sbjct: 27 GQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVK 86
Query: 261 LR 266
L+
Sbjct: 87 LQ 88
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/64 (28%), Positives = 37/64 (57%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+G +L+YDI S+ +V+ W +++ ++ +N ++LVGNK D+ R + + + A+
Sbjct: 110 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 169
Query: 508 ATDL 519
L
Sbjct: 170 QLGL 173
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRPDAEPAD 668
G + GL F ETSA ++ NV+ F+ ++ I +++ +DP + +P + +
Sbjct: 164 GRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQ----QPKGQKLE 219
Query: 669 VRPSQ 683
P+Q
Sbjct: 220 ANPTQ 224
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2
Query: 233 YRGRR*DLKAQIWDTAGQERYRAITSAYYRGA 328
+RG + +K QIWDTAGQERYR IT+AYYRGA
Sbjct: 65 FRGDK-RVKLQIWDTAGQERYRTITTAYYRGA 95
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +3
Query: 81 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*K 260
G + +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ K K
Sbjct: 13 GQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVK 72
Query: 261 LR 266
L+
Sbjct: 73 LQ 74
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/64 (28%), Positives = 37/64 (57%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
+G +L+YDI S+ +V+ W +++ ++ +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 508 ATDL 519
L
Sbjct: 156 QLGL 159
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRPDAEPAD 668
G + GL F ETSA ++ NV+ F+ ++ I +++ +DP + +P + +
Sbjct: 150 GRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQ----QPKGQKLE 205
Query: 669 VRPSQ 683
P+Q
Sbjct: 206 ANPTQ 210
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 50.8 bits (116), Expect = 9e-07
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLREL-RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
AL+VYD+ ++E+VE+WL++L R ++ + L+GNK+DL R + E KA A
Sbjct: 132 ALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDLVEKREVTEAEGKAMA 189
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 233 YRGRR*DLKAQIWDTAGQERYRAITSAYYRGA 328
YR R ++ Q+WDTAGQER+R + Y R A
Sbjct: 98 YRDREDVVRLQVWDTAGQERFRCMVPMYMRNA 129
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 245
KVV++GDSGVGK+S++ R +TIG F + + D
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGAD 97
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
F++V+ GD+ VGKSS + R R +F + ST+GV+F +++ VDG+
Sbjct: 462 FRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGR 508
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +1
Query: 322 RRVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 462
R GA+LVYD+ S+ V W+ +++ +++I I+LVGNK D+R
Sbjct: 533 RADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMR 579
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 263 QIWDTAGQERYRAITSAYYR---GAWARCSCTISPSTCRTRTW 382
Q+WDTAGQER+R++ +Y+R GA S R R W
Sbjct: 513 QLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDW 555
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 489 GESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRI 599
G S+ + G+ F+ETSALD +N++ A + E+ +
Sbjct: 591 GASMAAAMGVLFMETSALDGSNIDNAMLALTRELMAV 627
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +3
Query: 96 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 236
+YDYL K + GD GVGK+S L R+T N F + ST+G++F + +
Sbjct: 3 DYDYLIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKV 49
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +3
Query: 102 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 242
D +FKVV +GDS VGK+ L RF N F +TIGV+F +++++
Sbjct: 200 DRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKI 246
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2
Query: 263 QIWDTAGQERYRAITSAYYRGA 328
Q+WDTAGQER+R+IT Y+R A
Sbjct: 255 QLWDTAGQERFRSITKQYFRKA 276
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL 459
G +L++D+ S+ NV W+ +R D ++ LVGNK DL
Sbjct: 278 GVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDL 320
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 242
+ Y +++++IGDS VGKSSLL FT + S T+GV+F R IE+
Sbjct: 14 FHYQYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIEL 61
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLRE----LRDHADQNILIMLVGNKSDLRHLRSIPTEEAK 495
VG L +YD S+E+VE W++E L + + LVG KSD+ R + EE +
Sbjct: 92 VGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQRQVNYEEGE 151
Query: 496 AFAE 507
FA+
Sbjct: 152 YFAK 155
Score = 42.3 bits (95), Expect = 3e-04
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K Q+WDTAGQE++R+IT +YYR +
Sbjct: 67 VKLQLWDTAGQEKFRSITKSYYRNS 91
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAK 495
A++VYDI S+ +W+ ++R+ +++I+LVGNK+DL R + TE+ +
Sbjct: 87 AVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGE 140
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/52 (32%), Positives = 39/52 (75%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
FK+V +G+ VGK+S+++RF + F+ ++TIG++F ++++ ++ +T +L+
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQ 63
Score = 35.5 bits (78), Expect = 0.036
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYR 322
++ Q+WDTAGQER+R++ +Y R
Sbjct: 60 IRLQLWDTAGQERFRSLIPSYIR 82
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +3
Query: 471 VHPDGGGESVRGSNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRP 650
V + G + R N + FIETSA NV+ F+ I T + IV Q + + P ++ P
Sbjct: 134 VSTEDGEKKARDLN-VMFIETSAKAGYNVKQLFRKIATALPGIV-QEETPEQPNIVIMNP 191
Query: 651 DAEPADVRPSQ 683
P D SQ
Sbjct: 192 ---PKDAEESQ 199
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
Frame = +3
Query: 108 LFKVVLIGDSGVGKSS---------LLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
L KV+++GDSGVGK+S L++++ F + K+TIG +F TR + +D +T
Sbjct: 9 LLKVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNIDDRT 66
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/52 (32%), Positives = 39/52 (75%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
FK+V +G+ VGK+S+++RF + F+ ++TIG++F ++++ ++ +T +L+
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQ 63
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/52 (38%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV-DGKT*KLR 266
KVV++G+SG GK++LL+ F N F + +TIG++F + +++ DG++ +L+
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQ 59
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
++ Q+WDTAGQER+R + AY R A
Sbjct: 56 IRLQLWDTAGQERFRQLAPAYIRSA 80
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/52 (32%), Positives = 39/52 (75%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KLR 266
F++V +G+ VGK+SL++RF + F+ ++TIG++F ++++ ++ +T +L+
Sbjct: 11 FELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQ 62
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +1
Query: 322 RRVGALL-VYDIAKHLSYENVERWLRELRDHA---DQNILIMLVGNKSDLRHLRSIPTEE 489
R V A++ VYD+ S+ ++ W++E H D + +L+GNK D+ + T+E
Sbjct: 172 RNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCDVECTNRVSTDE 231
Query: 490 AKAFAEATDLVL 525
A+ FA+ ++ L
Sbjct: 232 AQMFADRNNMAL 243
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/47 (38%), Positives = 31/47 (65%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
FKV+++G++ VGK+ L RF F +++TIGV+F RS ++ +
Sbjct: 101 FKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENE 147
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/24 (66%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
Frame = +2
Query: 254 LKAQIWDTAGQERYR-AITSAYYR 322
L+ Q+WDTAGQERYR +I + YYR
Sbjct: 149 LRVQLWDTAGQERYRQSIVAHYYR 172
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = +1
Query: 340 LVYDIAKHLSYENVERWLRELRDHADQN---ILIMLVGNKSDLRHLRSIPTEEAKAFAEA 510
LVYD+ S+EN WL ++ + + + ++L+GNK+DL R + E K FA +
Sbjct: 114 LVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVVSVEAHKNFATS 173
Query: 511 TDLV 522
D++
Sbjct: 174 NDMM 177
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 90 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 236
+D D + K+V++GD GK+S+ RF + F+ T+G++F +R I
Sbjct: 29 DDPDDKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRI 77
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 254 LKAQIWDTAGQERYRAITSAYYRGA 328
+K IWDTAGQER+R +T +YYRGA
Sbjct: 33 VKLAIWDTAGQERFRTLTPSYYRGA 57
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDH-ADQNILIMLVGNKSDL 459
G + VYD+ S+E + W++E+ + + NI+ M+V NK D+
Sbjct: 59 GVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDM 102
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 165 RFTRNEFNLESKSTIGVEFATRSIEVDGKT*KL 263
RF + F+ E +TIGV+F S+ +DG KL
Sbjct: 3 RFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKL 35
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
G +LV+ +A+ ++EN+++ ++ + + ++LVGNKSDL R + EA FAE
Sbjct: 77 GFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLAETRQVDESEAHNFAE 135
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT*KL 263
+K+V++G+ GVGKS+L ++ + F +TI + S +VD + +L
Sbjct: 4 YKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLS-KVDAENARL 53
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
FKVV++G GVGKS+L +F + F + TI +F + IEVDG+
Sbjct: 4 FKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTI-EDFYRKEIEVDGQ 49
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVE 218
FK+VL+GD G GK++ + R EF + +T+GVE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 45
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 462
A++++D+ ++Y+NV W R+L +NI I+L GNK D++
Sbjct: 85 AIIMFDVTARVTYKNVPNWHRDLA-RVCENIPIVLCGNKVDVK 126
Score = 31.1 bits (67), Expect = 0.78
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 233 YRGRR*DLKAQIWDTAGQERYRAITSAYY 319
+ R ++ +WDTAGQE++ + YY
Sbjct: 51 FHTNRGQIRFNVWDTAGQEKFGGLRDGYY 79
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
+K+V++GD GVGKS+L + +N F E TI + + + +DG+T
Sbjct: 4 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSY-RKQVVIDGET 50
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHAD-QNILIMLVGNKSDL 459
G LLV+ + + S+ENV + ++R D ++ ++LVGNK DL
Sbjct: 77 GFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDL 120
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLREL-RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 507
G +LVY I S+E ++ R + D +I I++VGNK+DL R + EE + A
Sbjct: 87 GFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEELAR 146
Query: 508 ATD 516
D
Sbjct: 147 QWD 149
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 209
KV ++G VGKS+L+ RFT+N F +STI
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTI 46
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 254
+K+V++GD GVGKS+L + +N F E TI + + + +DG+T
Sbjct: 7 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSY-RKQVVIDGET 53
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHAD-QNILIMLVGNKSDL 459
G LLV+ + + S+ENV + ++R D ++ ++LVGNK DL
Sbjct: 80 GFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDL 123
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 245
KVV++GDSGVGK+S++ R +TIG F + + D
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGAD 97
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 334 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 462
A++++D+ ++Y+NV W +L +NI I+L GNK D++
Sbjct: 19 AIIMFDVTARVTYKNVPNWHHDLA-RVCENIPIVLCGNKVDVK 60
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 35.5 bits (78), Expect = 0.036
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 120 VLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEF 221
++IG+SGVGKSSL+ RF + + E +IGV F
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDPERAVSIGVPF 34
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 248
+K+V+IGD GVGKSSL +F + +F TI ++ + E+DG
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQY-IQHCEIDG 62
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 35.1 bits (77), Expect = 0.048
Identities = 15/55 (27%), Positives = 34/55 (61%)
Frame = +3
Query: 84 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 248
T ++ + +++V++G + VGK++++ R+ NEF+ + K TI + +R + G
Sbjct: 9 TEDEMCEERYRLVVLGSAKVGKTNIIRRYLYNEFSSKYKETI-EDLHSREFRIQG 62
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 248
+K+V+IGD GVGKSSL +F + +F TI ++ + E+DG
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQY-IQHCEIDG 62
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 35.1 bits (77), Expect = 0.048
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 462
L+ + I S EN+ E+W E+R H N+ I+LVGNK DLR
Sbjct: 81 LMCFSIDSPDSLENIPEKWTPEVR-HFCPNVPIILVGNKRDLR 122
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K+V++GD GK+ LL F++++F T+ E IEVDGK
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTV-FENYVADIEVDGK 51
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 35.1 bits (77), Expect = 0.048
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 462
L+ + I S EN+ E+W E+R H N+ I+LVGNK DLR
Sbjct: 81 LMCFSIDSPDSLENIPEKWTPEVR-HFCPNVPIILVGNKRDLR 122
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K+V++GD GK+ LL F++++F T+ E IEVDGK
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTV-FENYVADIEVDGK 51
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 34.7 bits (76), Expect = 0.063
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +3
Query: 81 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
GT + + KV+++G GVGKS+L +F +EF E + T + + + +DG+
Sbjct: 8 GTLPPQQQVVHKVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSY-RKKVVLDGE 63
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELR--DHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
G + V+ I S+E + ++ ++D ++ I+LVGNK D+R R + E + A
Sbjct: 91 GFICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKGDMRDQRVVSAELCRQRA 150
Query: 505 E 507
E
Sbjct: 151 E 151
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 266 IWDTAGQERYRAITSAYYR 322
I DTAGQE Y AI YYR
Sbjct: 69 ILDTAGQEDYSAIRDNYYR 87
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 34.3 bits (75), Expect = 0.083
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
+K+V++G GVGKS+L +F + F + TI + + +EVDG+
Sbjct: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSY-RKQVEVDGQ 49
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLREL--RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
G L+V+ + S+E V++ L EL R + I+LVGNK+DL + R + EA+ A
Sbjct: 91 GFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELA 149
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLREL--RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
G L+V+ + S+E V++ L EL R + I+LVGNK+DL + R + EA+ A
Sbjct: 91 GFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELA 149
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLREL--RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
G L+V+ + S+E V++ L EL R + I+LVGNK+DL + R + EA+ A
Sbjct: 91 GFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELA 149
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K V++GD VGK+ LL +T N F E T+ ++T ++ VDG+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYST-NVMVDGR 49
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 471
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>Z73422-14|CAD37351.1| 441|Caenorhabditis elegans Hypothetical
protein C39E9.14b protein.
Length = 441
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 117 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 212
V+++GD+ GKSSLLSR +++ ++ KS +G
Sbjct: 49 VIVLGDNRSGKSSLLSRLDKSDRTVKPKSLLG 80
>Z73422-13|CAA97773.2| 443|Caenorhabditis elegans Hypothetical
protein C39E9.14a protein.
Length = 443
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 117 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 212
V+++GD+ GKSSLLSR +++ ++ KS +G
Sbjct: 49 VIVLGDNRSGKSSLLSRLDKSDRTVKPKSLLG 80
>Z70307-16|CAC42262.2| 441|Caenorhabditis elegans Hypothetical
protein C39E9.14b protein.
Length = 441
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 117 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 212
V+++GD+ GKSSLLSR +++ ++ KS +G
Sbjct: 49 VIVLGDNRSGKSSLLSRLDKSDRTVKPKSLLG 80
>Z70307-15|CAA94342.2| 443|Caenorhabditis elegans Hypothetical
protein C39E9.14a protein.
Length = 443
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 117 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 212
V+++GD+ GKSSLLSR +++ ++ KS +G
Sbjct: 49 VIVLGDNRSGKSSLLSRLDKSDRTVKPKSLLG 80
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K V++GD VGK+ LL +T N F E T+ ++T ++ VDG+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYST-NVMVDGR 49
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 471
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K+V++GD+ GK+SLL +T+ +F L++ +T + S+ +D K
Sbjct: 6 KLVVVGDTYTGKTSLLVAYTKKQF-LDNYTTTVFDNWAVSVHIDNK 50
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 388 WLRELRDHADQNILIMLVGNKSDL 459
W+ E+R +A N+ IMLVG K+DL
Sbjct: 98 WIPEIRKYAGDNVPIMLVGTKNDL 121
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVERWLRELRDH----ADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
++VYD+ LS++ E L + H + +LVGNK+DL R + E + A
Sbjct: 83 VVVYDVTSQLSFQYAEGILERISRHEHVLCPREHRTLLVGNKTDLERYRQVSETEGERLA 142
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/19 (73%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = +2
Query: 269 WDTAGQERYR-AITSAYYR 322
WDTAGQERYR +I + YYR
Sbjct: 1 WDTAGQERYRQSIVAHYYR 19
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +1
Query: 322 RRVGALL-VYDIAKHLSYENVERWLRELRDH---ADQNILIMLVGNK 450
R V A++ VYD+ S+ ++ W++E H D + +L+GNK
Sbjct: 19 RNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNK 65
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGR 49
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 471
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 236
K V++GD VGK+ LL +T N+F E T+ +A ++
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTAM 45
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGR 49
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 471
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGR 49
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 471
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 32.3 bits (70), Expect = 0.34
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 111 FKVVLIGDSGVGKSSLLSRFTRNEF 185
+K+ ++GD+G GKSSL+S+ +E+
Sbjct: 238 YKIYVVGDTGTGKSSLISQLITSEY 262
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGR 49
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 471
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGR 49
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 337 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 471
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 251
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGR 49
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 31.9 bits (69), Expect = 0.44
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFA 224
K V++GD VGK+ LL +T N+F E T+ +A
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA 41
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 31.9 bits (69), Expect = 0.44
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFA 224
K V++GD VGK+ LL +T N+F E T+ +A
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA 38
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 31.9 bits (69), Expect = 0.44
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
G +++Y + S+ + + L + N I+LVG+K D+R R + + E + A
Sbjct: 291 GIIIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQLA 348
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 331 GALLVYDIAKHLSYENVERWLREL--RDHADQNILIMLVGNKSDLRHLRSIPTE 486
G L+V+ + S+E V++ L EL R + I+LVGNK+DL + R + E
Sbjct: 91 GFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVSFE 143
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 117 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTI-GVEFATRSIE 239
V L+G SG GKS+++S R L+ K TI GV+ ++E
Sbjct: 447 VALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLE 488
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 117 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTI-GVEFATRSIE 239
V L+G SG GKS+++S R L+ K TI GV+ ++E
Sbjct: 447 VALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLE 488
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 251 DLKAQIWDTAGQERYRAITSAYYRGAWA 334
++K +WD GQ++ R + YY G A
Sbjct: 56 NIKFNVWDVGGQDKIRPLWRHYYTGTQA 83
>AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical
protein H27M09.3 protein.
Length = 605
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 525 IETSALDSTNVEPAFQNILTEIYRIVSQRQMRDPPEGDVIRPDAEPAD 668
IE SA +S ++EP N+ TEI +V Q ++ + V++ DAE D
Sbjct: 328 IEHSAEESVHIEPP--NV-TEIREVVPQITIQPTRQDSVVQRDAEELD 372
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 248
K V++GD VGK+ +L +T + F ++ T+ ++ + + +DG
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDG 52
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 248
K V++GD VGK+ +L +T + F ++ T+ ++ + + +DG
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDG 52
>U64848-10|AAB04888.1| 168|Caenorhabditis elegans Hypothetical
protein C50E3.2 protein.
Length = 168
Score = 28.3 bits (60), Expect = 5.5
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 103 IICSKLYSLEILVWVKAVFCRV 168
+IC KL + ++ +W A+FC +
Sbjct: 71 VICGKLEACQVALWTSAMFCDI 92
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 114 KVVLIGDSGVGKSSLLSRFTRNEF 185
++VLIGD G GK+SL+ +E+
Sbjct: 11 RIVLIGDEGCGKTSLVMSLLEDEW 34
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +1
Query: 337 LLVYDIAKHLSYEN---VERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 504
+L+Y + S+ + ++E++ +A IMLVGNK D R + + + A
Sbjct: 13 ILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDEESKREVSSNSGQKVA 71
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 328 VGALLVYDIAKHLSYENVERWLREL 402
VGA+LV+D+ S EN+ WL L
Sbjct: 91 VGAILVHDLTNKRSEENLATWLTML 115
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
protein H08M01.2b protein.
Length = 1341
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 129 GDSGVGKSSLLSRFTR---NEFNLESKSTI 209
G SGVGKS L +RF R +EF+ E S +
Sbjct: 32 GPSGVGKSLLCNRFVRPAADEFHREHSSVL 61
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
protein H08M01.2a protein.
Length = 1320
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 129 GDSGVGKSSLLSRFTR---NEFNLESKSTI 209
G SGVGKS L +RF R +EF+ E S +
Sbjct: 32 GPSGVGKSLLCNRFVRPAADEFHREHSSVL 61
>Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical
protein ZK669.5b protein.
Length = 176
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRF 170
YD +FK ++ G VGK +LL F
Sbjct: 8 YDRVFKFLIFGGKSVGKKTLLRSF 31
>Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical
protein ZK669.5a protein.
Length = 212
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 99 YDYLFKVVLIGDSGVGKSSLLSRF 170
YD +FK ++ G VGK +LL F
Sbjct: 8 YDRVFKFLIFGGKSVGKKTLLRSF 31
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,041,163
Number of Sequences: 27780
Number of extensions: 259520
Number of successful extensions: 1250
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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