Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0529
         (679 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q55B65 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_Q6CS81 Cluster: Similarity; n=1; Kluyveromyces lactis|R...    33   4.8  
UniRef50_O06023 Cluster: Lob1; n=3; Histophilus somni|Rep: Lob1 ...    33   6.4  
UniRef50_O51581 Cluster: Glucose-6-phosphate 1-dehydrogenase; n=...    33   6.4  
UniRef50_A0DJY7 Cluster: Chromosome undetermined scaffold_53, wh...    33   8.4  

>UniRef50_Q55B65 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 572

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
 Frame = +1

Query: 217 FCFKTSNEFQL-YSLVYSN-FKTNNFETIFVLN 309
           FCFK SNE +L ++L+ +N FK   +  IFVLN
Sbjct: 478 FCFKKSNELELIFNLILNNIFKLQLYSLIFVLN 510


>UniRef50_Q6CS81 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
           Similarity - Kluyveromyces lactis (Yeast) (Candida
           sphaerica)
          Length = 155

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +1

Query: 115 YNQLIVNSRLYLKQYRWPVQTDAILNTSGNFLAIFCFKTSNEFQLYSLVYSNFKTNNFET 294
           Y + + +  +Y K    P  ++A L  S + LA F FKT        L  +N K N F T
Sbjct: 41  YMREVFDVSVYSKTILAPSPSNAALTLSASSLATFSFKTFGALSTNFLASTNDKPNKFLT 100

Query: 295 -IFVLNLCI*SRD 330
            + +L L + S D
Sbjct: 101 SLMILGLDLASND 113


>UniRef50_O06023 Cluster: Lob1; n=3; Histophilus somni|Rep: Lob1 -
           Haemophilus somnus (Histophilus somni)
          Length = 287

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = +1

Query: 169 VQTDAILNTSGNFLAI--FCFKTSNEFQLYSLVYSN 270
           ++ DAIL    NFLA+  FCF   N+FQ + L +SN
Sbjct: 136 LEDDAILQP--NFLAVYQFCFSAENQFQFFWLTHSN 169


>UniRef50_O51581 Cluster: Glucose-6-phosphate 1-dehydrogenase; n=4;
           Borrelia|Rep: Glucose-6-phosphate 1-dehydrogenase -
           Borrelia burgdorferi (Lyme disease spirochete)
          Length = 478

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +1

Query: 139 RLYLKQYRWPVQTDAILNTSGNFLAIFCFKTSNEFQLYSLVYSNFKTNNFETIFVLN 309
           RLY+K   W  +TD+++    NF  ++ F   NE + Y  ++  F   + ETI+ L+
Sbjct: 57  RLYIKDSLWQEETDSLIEIFLNFF-VYVFGDFNEKESYKNLF-KFLDRSRETIYYLS 111


>UniRef50_A0DJY7 Cluster: Chromosome undetermined scaffold_53, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_53,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1473

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
 Frame = +1

Query: 112 KYNQLIVNSRLYL--KQYRWPVQTDAILNTSGNFLAIFCFKTSNEFQLYSLVYSNFK 276
           K NQ+I+   +Y     Y + V++ ++ N S + L  FC +  NE+QLYSL +  F+
Sbjct: 268 KQNQIILLEGIYFICDNYDFSVESKSLNNLSSDLLK-FCLQ--NEYQLYSLSFKIFQ 321


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,427,121
Number of Sequences: 1657284
Number of extensions: 9297034
Number of successful extensions: 19260
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19256
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)