Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0529
         (679 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0707 - 24468329-24468448,24468794-24468940,24469050-244691...    29   4.5  

>01_05_0707 -
           24468329-24468448,24468794-24468940,24469050-24469103,
           24469185-24469300,24470537-24470583,24470686-24470723,
           24471050-24471268,24471504-24471602,24471675-24471728,
           24472907-24473148,24474258-24474447
          Length = 441

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +1

Query: 100 GEHCKYN---QLIVNSRLYLKQYRWPVQTDAILNTSGNFLAIFCFKTSN 237
           G  C++N   +L++N  L L Q   P     +LN+S NF+  F F  ++
Sbjct: 285 GSTCRFNHPDRLVLNFPLPLGQTILPTPESMLLNSSANFMQGFDFHAAH 333


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,163,699
Number of Sequences: 37544
Number of extensions: 212097
Number of successful extensions: 370
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)