Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0528
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78065-5|CAB01515.1| 954|Caenorhabditis elegans Hypothetical pr... 29 4.0
U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 28 5.3
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 5.3
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 5.3
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL110487-7|CAB54431.1| 581|Caenorhabditis elegans Hypothetical ... 28 7.0
>Z78065-5|CAB01515.1| 954|Caenorhabditis elegans Hypothetical
protein T09E8.2 protein.
Length = 954
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 514 KGVRWQEALH*NEEGYISRVLNCYRGGSSHLTC 416
K +RW E L E Y +R+L+ RGG + C
Sbjct: 232 KRLRWIEQLASGNETYKNRLLHALRGGVTQFLC 264
>U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical
protein C02G6.1 protein.
Length = 980
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 202 TGKIKTFCREKGHGFVKPKKGAKIYFSIYLISKVNMYPCLVMKLYIDFAQSHLSSKNF 375
TG KT E V+P+ ++ + S + M C++ K +D QSHL + F
Sbjct: 182 TGNKKTLLEEARKKGVEPRDALLQFYKKWYSSNI-MTCCIIGKESLDVLQSHLKTLEF 238
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 94 DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
DS TN L LP+ I R + TASTS PL+
Sbjct: 1851 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 1886
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 94 DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
DS TN L LP+ I R + TASTS PL+
Sbjct: 2142 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 2177
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 94 DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
DS TN L LP+ I R + TASTS PL+
Sbjct: 2157 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 2192
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 94 DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
DS TN L LP+ I R + TASTS PL+
Sbjct: 1961 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 1996
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 94 DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
DS TN L LP+ I R + TASTS PL+
Sbjct: 1851 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 1886
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 94 DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
DS TN L LP+ I R + TASTS PL+
Sbjct: 2142 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 2177
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 94 DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
DS TN L LP+ I R + TASTS PL+
Sbjct: 2157 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 2192
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 94 DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
DS TN L LP+ I R + TASTS PL+
Sbjct: 1961 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 1996
>AL110487-7|CAB54431.1| 581|Caenorhabditis elegans Hypothetical
protein Y39E4B.10 protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/91 (21%), Positives = 38/91 (41%)
Frame = -1
Query: 443 QRWFVPLDVFLRSEMNYAHMDSLKFFELRWDWAKSIYNFITRQGYIFTFDIRYMEKYIFA 264
Q++ + L++F + NY H+ ++FF + K + ++ F +EK IF+
Sbjct: 302 QKFLIFLNIFKK---NYYHIRKIRFFNFFYISKKILTKKFFKKNLFFFLIFNNLEKSIFS 358
Query: 263 PFFGFTNP*PFSLQNVLILPVSNGLPKALSD 171
F FS + + N A+ D
Sbjct: 359 NFKKSNTFFQFSKNKIFNFLIKNLYTNAICD 389
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,710,270
Number of Sequences: 27780
Number of extensions: 353259
Number of successful extensions: 952
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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