Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0526
         (694 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54CM6 Cluster: Putative uncharacterized protein; n=1; ...    35   2.2  
UniRef50_Q7M449 Cluster: Cryptogene protein G4; n=1; Leishmania ...    33   6.6  
UniRef50_Q22A80 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  

>UniRef50_Q54CM6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 72

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = +2

Query: 143 MLFYFCFFKFCLNWNCDSILL 205
           ++F+F FF FC+NW C++ LL
Sbjct: 39  LIFFFFFFFFCVNWGCENNLL 59


>UniRef50_Q7M449 Cluster: Cryptogene protein G4; n=1; Leishmania
           tarentolae|Rep: Cryptogene protein G4 - Leishmania
           tarentolae (Sauroleishmania tarentolae)
          Length = 169

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +2

Query: 137 IIMLFYFCFFKFCLNWNCDSILLIFFRKLCHY--LCEIILGYFFFSC 271
           +  +FYFCFF FCL   C  +  I+   +C +  +C +++    F C
Sbjct: 18  VCCIFYFCFF-FCLFDLCVMVYFIYIAFVCLFVLVCYVVILLLCFDC 63


>UniRef50_Q22A80 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 336

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +2

Query: 137 IIML--FYFCFFKFCLNWNCDSILLIFFRKLCHYLCEIILGYFFFS 268
           IIML  FY+  F F L WN +  +L +F +   Y     L Y +F+
Sbjct: 172 IIMLYSFYYSLFLFMLKWNYNPYILSYFEQYAAYFLGFGLMYSWFT 217


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,233,708
Number of Sequences: 1657284
Number of extensions: 10582673
Number of successful extensions: 19142
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19111
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)