BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0526 (694 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL031627-15|CAA20966.1| 318|Caenorhabditis elegans Hypothetical... 33 0.19 Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical pr... 27 9.6 Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical p... 27 9.6 >AL031627-15|CAA20966.1| 318|Caenorhabditis elegans Hypothetical protein Y102A5C.25 protein. Length = 318 Score = 33.1 bits (72), Expect = 0.19 Identities = 21/93 (22%), Positives = 50/93 (53%) Frame = +3 Query: 213 LENFVIIYVKLF*AISFSPAVVWGRILPYNRNIFLHKICFNQINNVVIT*FTNIFAMLIS 392 L+NF +I + L+ + F+ +++ +LP+ I+ +K+ + ++I TN F ++ Sbjct: 15 LKNFDLILIGLYGLLFFACIIIYTVVLPF--YIYANKVNHERDKEILIYPITNHFYKMVI 72 Query: 393 I*TSLVVSACKFAILYFIEMVNSNSCTKIIYIL 491 + + +S C F + ++ + S+S I +I+ Sbjct: 73 VYYLIFISTC-FGVFFYPYL--SDSIVLISFII 102 >Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical protein Y70C5C.1 protein. Length = 985 Score = 27.5 bits (58), Expect = 9.6 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -2 Query: 684 KSKNLSCHAVFFFKSSKCKRYSLTFLTDVASLLS*LEK 571 K K LSC F+ +C++Y+ T + + LL ++K Sbjct: 863 KPKTLSCRFKKFWDEIECRQYNFTRIEEDVELLKTIKK 900 >Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical protein Y70C5C.1 protein. Length = 985 Score = 27.5 bits (58), Expect = 9.6 Identities = 12/38 (31%), Positives = 21/38 (55%) Frame = -2 Query: 684 KSKNLSCHAVFFFKSSKCKRYSLTFLTDVASLLS*LEK 571 K K LSC F+ +C++Y+ T + + LL ++K Sbjct: 863 KPKTLSCRFKKFWDEIECRQYNFTRIEEDVELLKTIKK 900 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,978,877 Number of Sequences: 27780 Number of extensions: 285349 Number of successful extensions: 546 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 535 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 546 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1592382278 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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