Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0526
         (694 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   2.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.6  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    22   4.8  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   4.8  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   4.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.4  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 521 YIFLTYFFFNEFQDLVRF 574
           +I + YF F  F  LVRF
Sbjct: 16  FILINYFIFLYFNSLVRF 33


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 128 SKKIIMLFYFCFFKFCLNWNCDSILLI 208
           + +I+ LF   FF+FC +   D IL +
Sbjct: 63  ANEILELFGRMFFEFCQDSGYDKILQV 89


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 128 SKKIIMLFYFCFFKFCLNWNCDSILLI 208
           + +I+ LF   FF+FC +   D IL +
Sbjct: 63  ANEILELFGRMFFEFCQDSGYDKILQV 89


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 515 IDYIFLTYFFFNEFQD 562
           +DYIFL    FN+FQD
Sbjct: 179 LDYIFL---IFNQFQD 191


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 515 IDYIFLTYFFFNEFQD 562
           +DYIFL    FN+FQD
Sbjct: 179 LDYIFL---IFNQFQD 191


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 515 IDYIFLTYFFFNEFQD 562
           +DYIFL    FN+FQD
Sbjct: 179 LDYIFL---IFNQFQD 191


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 654 FFFKSSKCKRYSLTFLTDVAS 592
           ++F+S+K    +L  L DVAS
Sbjct: 393 YYFESNKIDETTLKHLIDVAS 413


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 675 NLSCHAVFFFKSSKCKRYSLTFLTDVAS 592
           NL C  V F ++  C   SLT   + A+
Sbjct: 81  NLKCSLVEFSENKNCNAGSLTVKKNFAN 108


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 654 FFFKSSKCKRYSLTFLTDVAS 592
           ++F+S+K    +L  L DVAS
Sbjct: 393 YYFESNKIDETTLKHLIDVAS 413


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,553
Number of Sequences: 438
Number of extensions: 3479
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)