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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0525
         (752 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual    29   0.54 
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac...    28   1.6  
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch...    27   2.9  
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ...    27   2.9  
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S...    27   3.8  
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2...    27   3.8  
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ...    26   5.0  
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    26   5.0  
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb...    26   5.0  
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    26   6.6  
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac...    25   8.8  
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu...    25   8.8  
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|...    25   8.8  
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c...    25   8.8  

>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1236

 Score = 29.5 bits (63), Expect = 0.54
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = -1

Query: 686  ATMLSNTGVTWSTAIVLKAIPRIPSNLAATKASPGS--DTASANVWRRTLSPPTVTSSVE 513
            +++ S T ++ S  +     P + S  + T +  GS  D+A+++ W    S   +TSSV 
Sbjct: 883  SSLSSTTSLSTSIPVTSSVAPAVTSTGSETSSVVGSGTDSATSSSWTAETSSSAITSSVA 942

Query: 512  RS 507
             S
Sbjct: 943  AS 944


>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 533

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 281 YLDAQ-YYGVISIGTPPQSFKVVFDTGSSNLWVPSK 385
           Y DA  Y+  +++G+  + + +  DTGS   WV +K
Sbjct: 70  YTDAGGYFANLTLGSNERVYSLTLDTGSPYTWVTAK 105


>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 297

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
 Frame = -1

Query: 656 WSTAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERSRRGCRSRTVS 477
           W+    LK++    S  +   +SP    +  +  +++       S   + ++GC S    
Sbjct: 210 WTEHAELKSVNEGSSCCSKKDSSPSEKPSCCSQEKKSCCSSKKPSCCSQEKKGCCS--TE 267

Query: 476 RTGCHSRRTSWTCGCR--TCCAANKRCWCS 393
           +T C S+     C     +CC+  K   C+
Sbjct: 268 KTSCCSQEKKSCCTSEKPSCCSNGKSTVCA 297


>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 293

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = -1

Query: 626 PRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERSRRGCRSRTVSRTGCHSRRTS 447
           PR+    A++K +  S TAS      ++SP +  SSV  S     SR    +  H +  S
Sbjct: 96  PRLSKPYASSKLAASSRTASYQAMSYSVSPTSTNSSVATSLNYQSSRETGISKDHWKPDS 155

Query: 446 WTCGC 432
               C
Sbjct: 156 DVSVC 160


>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
           Cap1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 551

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -1

Query: 668 TGVTWSTAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSS 519
           TG+TWST      +    +NL+A+K    S   SAN       PP   S+
Sbjct: 267 TGLTWSTKQDAVPLKTALANLSASKTQAPSSGDSANGGLPPPPPPPPPSN 316


>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 413

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 388 LFGRHPEVGGSGVEYHLERLRRRADTDHSVVLSIK 284
           +FG + E GG G     +R RR +D  H   +S++
Sbjct: 95  MFGMNFEAGGPGKNVPRDRKRRGSDVIHDYEISLE 129


>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 501

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 102 MGKISLFFLALIASSVMALYRVPLHRMKTARTH 200
           MGK+S+ + A IAS+ + ++  P +R      H
Sbjct: 1   MGKLSMLYNAAIASTFVKVFLFPSYRSTDFEVH 33


>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = -1

Query: 707 TGCTSP*ATMLSNTGVTWSTAIVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPTV 528
           T  TS  +T L++   T ST++   A     S++  T +   +  +SAN    T +  T 
Sbjct: 381 TSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTP 440

Query: 527 TSSVERSRRGCRSRT 483
            SSV  +     S T
Sbjct: 441 LSSVNSTTATSASST 455


>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 827

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 603 GHEGKPGLRHGLGERL 556
           G EGKPG+  G+GE L
Sbjct: 72  GTEGKPGVSRGVGEEL 87


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
 Frame = -1

Query: 707 TGCTSP*ATMLSNTGVTW--STAIVLKAIPRIPS--NLAATKASPGSDTASANVWRRTLS 540
           T  TSP +T  S+T V+W  +T I   +  ++ S  ++  T  +  S T +++    T S
Sbjct: 602 TPITSPNSTSSSSTQVSWNSTTPITGTSTSKVTSSTSIPLTSTNRTSTTFTSSTSISTSS 661

Query: 539 PPTVTSS 519
             T TSS
Sbjct: 662 SSTATSS 668


>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
           Spp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2363

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 64  ISKSPSCGF*KQQWERYLYF 123
           + K P CGF    W  +L+F
Sbjct: 644 VGKGPGCGFWAPSWRVWLFF 663


>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1405

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = -1

Query: 644  IVLKAIPRIPSNLAATKASPGSDTASANVWRRTLSPPTVTSSVERSRRGCRSRTVSRTGC 465
            I    + R PSN  +    P + +ASAN   + + P  + + VER RR  +      +  
Sbjct: 860  ICFTTVDRSPSNSDSDDQIPDTPSASAN---QGIFPRLIANLVER-RRQIKGLLKDNSAT 915

Query: 464  HSRRTSW 444
             ++R  W
Sbjct: 916  PTQRLQW 922


>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 612

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +2

Query: 209 GWH*TGAVEIKIRCDCPSPEPLS 277
           GW  TG    KIRCD  S +PLS
Sbjct: 420 GWKYTGEQLFKIRCD--SKQPLS 440


>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 807

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 539 PPTVTSSVERSRRGCRSRTVSR 474
           PP++ SS E  RR C  + V+R
Sbjct: 416 PPSIASSPESKRRKCPKKFVAR 437


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,035,366
Number of Sequences: 5004
Number of extensions: 62826
Number of successful extensions: 173
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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