Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0524
         (665 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051700-1|AAK93124.1|  501|Drosophila melanogaster LD24362p pro...    61   1e-09
AE014296-2346|AAF49769.1|  501|Drosophila melanogaster CG6650-PA...    61   1e-09
BT001705-1|AAN71460.1|  362|Drosophila melanogaster RE65359p pro...    49   5e-06

>AY051700-1|AAK93124.1|  501|Drosophila melanogaster LD24362p
           protein.
          Length = 501

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
 Frame = +3

Query: 267 LLSLENENRVKTGNMQPRVALGYGACHDLFVNATLLLDHRELIGVPEHFDE------ITT 428
           LL++E   +       P+VA+GYGAC DL +NAT  LD      +P           +  
Sbjct: 43  LLAIEGSLKRTALEPAPKVAIGYGACTDLQINATEFLDRYYGRRIPVAAATTGSRAVVNN 102

Query: 429 KEEFLKSFTYFFKHGAAAERFMSNSKL 509
           ++E L+SF Y+F++GAAAER M+NS L
Sbjct: 103 EDELLQSFAYYFQNGAAAERVMANSTL 129



 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 27/37 (72%)
 Frame = +2

Query: 554 WNIGGNAPLMAKRFYMEGWKVLFAAKMSNNLKKYIPE 664
           W +GGNAPLMA RF+MEG +VL  A MS  L+  +P+
Sbjct: 147 WYMGGNAPLMAVRFFMEGAQVLLGAHMSRKLRPLLPK 183


>AE014296-2346|AAF49769.1|  501|Drosophila melanogaster CG6650-PA
           protein.
          Length = 501

 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
 Frame = +3

Query: 267 LLSLENENRVKTGNMQPRVALGYGACHDLFVNATLLLDHRELIGVPEHFDE------ITT 428
           LL++E   +       P+VA+GYGAC DL +NAT  LD      +P           +  
Sbjct: 43  LLAIEGSLKRTALEPAPKVAIGYGACTDLQINATEFLDRYYGRRIPVAAATTGSRAVVNN 102

Query: 429 KEEFLKSFTYFFKHGAAAERFMSNSKL 509
           ++E L+SF Y+F++GAAAER M+NS L
Sbjct: 103 EDELLQSFAYYFQNGAAAERVMANSTL 129



 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 27/37 (72%)
 Frame = +2

Query: 554 WNIGGNAPLMAKRFYMEGWKVLFAAKMSNNLKKYIPE 664
           W +GGNAPLMA RF+MEG +VL  A MS  L+  +P+
Sbjct: 147 WYMGGNAPLMAVRFFMEGAQVLLGAHMSRKLRPLLPK 183


>BT001705-1|AAN71460.1|  362|Drosophila melanogaster RE65359p
           protein.
          Length = 362

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 21/37 (56%), Positives = 27/37 (72%)
 Frame = +2

Query: 554 WNIGGNAPLMAKRFYMEGWKVLFAAKMSNNLKKYIPE 664
           W +GGNAPLMA RF+MEG +VL  A MS  L+  +P+
Sbjct: 8   WYMGGNAPLMAVRFFMEGAQVLLGAHMSRKLRPLLPK 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,785,598
Number of Sequences: 53049
Number of extensions: 626387
Number of successful extensions: 1356
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)