Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0524
         (665 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040642-3|AAN73872.2|  502|Caenorhabditis elegans Hypothetical ...    38   0.005
Z66497-9|CAA91286.1|  457|Caenorhabditis elegans Hypothetical pr...    31   0.56 
U49946-5|AAX55699.1|  919|Caenorhabditis elegans Diacylglycerol ...    29   3.9  
U49946-4|AAC48135.1|  952|Caenorhabditis elegans Diacylglycerol ...    29   3.9  
U49946-3|AAX55698.1|  796|Caenorhabditis elegans Diacylglycerol ...    29   3.9  
U49946-2|AAC48134.1|  950|Caenorhabditis elegans Diacylglycerol ...    29   3.9  
U49946-1|AAX55697.1|  794|Caenorhabditis elegans Diacylglycerol ...    29   3.9  
AC006610-6|AAK85452.1|  395|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    27   9.1  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    27   9.1  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    27   9.1  

>AF040642-3|AAN73872.2|  502|Caenorhabditis elegans Hypothetical
           protein C50D2.7 protein.
          Length = 502

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +3

Query: 294 VKTGNMQPRVALGYGACHDLFVNATLLLDH-RELIGVPEHFDEITTKEEFLKSFTYFFKH 470
           VK G M  +  +G+    DL V+   ++D         +  + + T  +  ++F +FF+ 
Sbjct: 58  VKPGAMFKKAVIGFNCNVDLIVSGVRVVDALNTTCSEGKDQETLETLADLHQTFAHFFQR 117

Query: 471 GAAAERFMSN 500
           GAAAER+MS+
Sbjct: 118 GAAAERYMSS 127


>Z66497-9|CAA91286.1|  457|Caenorhabditis elegans Hypothetical
           protein K08F8.4 protein.
          Length = 457

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 15/61 (24%), Positives = 31/61 (50%)
 Frame = +3

Query: 270 LSLENENRVKTGNMQPRVALGYGACHDLFVNATLLLDHRELIGVPEHFDEITTKEEFLKS 449
           L L   + V   +++ R +  +  C+++ V      DHR++ GV EHF +   K+  ++ 
Sbjct: 47  LKLFQAHDVNLSHIESRPSKTHEGCYEVLVEFAEAEDHRKIEGVIEHFQQKAEKKVLVQD 106

Query: 450 F 452
           +
Sbjct: 107 W 107


>U49946-5|AAX55699.1|  919|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform e protein.
          Length = 919

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -2

Query: 589 LCHERCITTNVPFCSWNV*SSLDVVIISLEFDMNLSAAAPCL--KKYVKLLRNSSLVVIS 416
           +CHE+C+ T V +CS        V +  ++  +  + +APCL  +KY  + R  +   +S
Sbjct: 57  VCHEKCLRTVVSYCS-------SVALQLIKNPVAHTWSAPCLIKRKYCCVCRKRTDDALS 109

Query: 415 SKC 407
            +C
Sbjct: 110 VEC 112


>U49946-4|AAC48135.1|  952|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform b protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -2

Query: 589 LCHERCITTNVPFCSWNV*SSLDVVIISLEFDMNLSAAAPCL--KKYVKLLRNSSLVVIS 416
           +CHE+C+ T V +CS        V +  ++  +  + +APCL  +KY  + R  +   +S
Sbjct: 57  VCHEKCLRTVVSYCS-------SVALQLIKNPVAHTWSAPCLIKRKYCCVCRKRTDDALS 109

Query: 415 SKC 407
            +C
Sbjct: 110 VEC 112


>U49946-3|AAX55698.1|  796|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform d protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -2

Query: 589 LCHERCITTNVPFCSWNV*SSLDVVIISLEFDMNLSAAAPCL--KKYVKLLRNSSLVVIS 416
           +CHE+C+ T V +CS        V +  ++  +  + +APCL  +KY  + R  +   +S
Sbjct: 57  VCHEKCLRTVVSYCS-------SVALQLIKNPVAHTWSAPCLIKRKYCCVCRKRTDDALS 109

Query: 415 SKC 407
            +C
Sbjct: 110 VEC 112


>U49946-2|AAC48134.1|  950|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform a protein.
          Length = 950

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -2

Query: 589 LCHERCITTNVPFCSWNV*SSLDVVIISLEFDMNLSAAAPCL--KKYVKLLRNSSLVVIS 416
           +CHE+C+ T V +CS        V +  ++  +  + +APCL  +KY  + R  +   +S
Sbjct: 57  VCHEKCLRTVVSYCS-------SVALQLIKNPVAHTWSAPCLIKRKYCCVCRKRTDDALS 109

Query: 415 SKC 407
            +C
Sbjct: 110 VEC 112


>U49946-1|AAX55697.1|  794|Caenorhabditis elegans Diacylglycerol
           kinase protein 1,isoform c protein.
          Length = 794

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -2

Query: 589 LCHERCITTNVPFCSWNV*SSLDVVIISLEFDMNLSAAAPCL--KKYVKLLRNSSLVVIS 416
           +CHE+C+ T V +CS        V +  ++  +  + +APCL  +KY  + R  +   +S
Sbjct: 57  VCHEKCLRTVVSYCS-------SVALQLIKNPVAHTWSAPCLIKRKYCCVCRKRTDDALS 109

Query: 415 SKC 407
            +C
Sbjct: 110 VEC 112


>AC006610-6|AAK85452.1|  395|Caenorhabditis elegans Hypothetical
           protein C30F12.6 protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 20/70 (28%), Positives = 31/70 (44%)
 Frame = -2

Query: 607 AFHIESLCHERCITTNVPFCSWNV*SSLDVVIISLEFDMNLSAAAPCLKKYVKLLRNSSL 428
           +F +E   H   I   + F  W V   +  +II  +  + LS     +KK VK    + +
Sbjct: 185 SFRLERNSHAYKIVFLLDFVLWYVLPIMCDIIIYAKIGITLSQCGDKIKKSVKPKIPNEV 244

Query: 427 VVISSKCSGT 398
           +V  SK S T
Sbjct: 245 IVEKSKTSST 254


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 327 LGYGACHDLFVNATLLLDHRELIGVPEHFDEIT---TKEEFLKSFTYFFKH 470
           LG    HD++ NA    +H++L  +   FD++    TK++ L   TYFFK+
Sbjct: 685 LGKPNIHDIYANACY--EHQQLDPLST-FDQLRDHYTKQQPLNKKTYFFKN 732


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 327 LGYGACHDLFVNATLLLDHRELIGVPEHFDEIT---TKEEFLKSFTYFFKH 470
           LG    HD++ NA    +H++L  +   FD++    TK++ L   TYFFK+
Sbjct: 685 LGKPNIHDIYANACY--EHQQLDPLST-FDQLRDHYTKQQPLNKKTYFFKN 732


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 327 LGYGACHDLFVNATLLLDHRELIGVPEHFDEIT---TKEEFLKSFTYFFKH 470
           LG    HD++ NA    +H++L  +   FD++    TK++ L   TYFFK+
Sbjct: 685 LGKPNIHDIYANACY--EHQQLDPLST-FDQLRDHYTKQQPLNKKTYFFKN 732


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,566,006
Number of Sequences: 27780
Number of extensions: 331036
Number of successful extensions: 816
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)