Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0524
         (665 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g51850.1 68416.m05686 calcium-dependent protein kinase, putat...    30   1.2  
At4g11550.1 68417.m01852 DC1 domain-containing protein contains ...    30   1.6  
At4g01740.1 68417.m00226 DC1 domain-containing protein similar t...    29   2.1  
At3g28740.1 68416.m03588 cytochrome P450 family protein contains...    29   2.1  
At4g02180.1 68417.m00290 DC1 domain-containing protein contains ...    29   2.8  
At3g13130.1 68416.m01643 hypothetical protein                          29   2.8  
At1g15670.1 68414.m01881 kelch repeat-containing F-box family pr...    28   6.4  

>At3g51850.1 68416.m05686 calcium-dependent protein kinase, putative
           / CDPK, putative similar to calcium-dependent protein
           kinase [Arabidopsis thaliana] gi|836942|gb|AAA67655;
           contains protein kinase domain, Pfam:PF00069; contains
           EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
           INTERPRO:IPR002048
          Length = 528

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 375 LDHRELIGVPEHFDEITTKEEFLKSFTYFFKHG 473
           LD+ E + V  H  ++   E   K+F+YF K G
Sbjct: 411 LDYGEFVAVSLHLQKVANDEHLRKAFSYFDKDG 443


>At4g11550.1 68417.m01852 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 668

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 21/77 (27%), Positives = 36/77 (46%)
 Frame = -2

Query: 640 ITHFSSKEYFPAFHIESLCHERCITTNVPFCSWNV*SSLDVVIISLEFDMNLSAAAPCLK 461
           I HFS KE++  FH+ +L  E     N   C+  +        +  +F ++ + A    K
Sbjct: 373 IQHFSHKEHYLRFHVSALLWEENKRCNA--CTQPIGLQSFYGCVVCDFILHQNCAESPRK 430

Query: 460 KYVKLLRNSSLVVISSK 410
           K+   L N  L +++SK
Sbjct: 431 KW-HFLHNERLTLVTSK 446


>At4g01740.1 68417.m00226 DC1 domain-containing protein similar to
           T15B16.6 similar to A. thaliana CHP-rich hypothetical
           proteins encoded by T10M13, GenBank accession number
           AF001308
          Length = 652

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
 Frame = -2

Query: 640 ITHFSSKEYFPAFHIES-LC--HERCITTNVPFCSWNV*SSLDVVIISLEFDMNLSAAAP 470
           I HFS KE++   H+ S LC  ++RC     P C  +    +D      +F ++ + A  
Sbjct: 345 IQHFSHKEHYLRLHVNSVLCDDNKRCSACTHPICLQSFYGCMD-----CDFILHQNCAGF 399

Query: 469 CLKKYVKLLRNSSLVVISSKCSGTPINS--RWSN 374
              K+  +L N  L +++++       +  RWSN
Sbjct: 400 LRMKW-HVLHNERLTLVTNETEVFKCYACERWSN 432


>At3g28740.1 68416.m03588 cytochrome P450 family protein contains
           Pfam profile: PF00067 cytochrome P450
          Length = 509

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 180 NFVIYFSVLRYLLSKN*HRRR*IVTVKEHLLSLENENRVK 299
           N   YF +LRY+ +   H ++    V E L SL NE RV+
Sbjct: 232 NAADYFPILRYVTNYEKHVKKLAGRVDEFLQSLVNEKRVE 271


>At4g02180.1 68417.m00290 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 989

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
 Frame = -2

Query: 640 ITHFSSKEYFPAFHI-ESLCHE--RCITTNVPFCSWNV*SSLDVVIISLEFDMNLSAAA- 473
           I HFS KE++   H+ + LC++  RC     P    +  S +D      +F ++ + A  
Sbjct: 708 IQHFSHKEHYLRLHVNDVLCNDNKRCKACTHPIFLQSFYSCMD-----CDFLLHQNCAGF 762

Query: 472 PCLKKYVKLLRNSSLVVISSKCSGTPINSRWSN 374
           P +K++V      +LV   +K        RWSN
Sbjct: 763 PRMKRHVLHNERLTLVTNETKLFQCAPCDRWSN 795


>At3g13130.1 68416.m01643 hypothetical protein
          Length = 201

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = -2

Query: 463 KKYVKLLRNSSLVVISSKCSG-----TPINSRWSNNNVAF 359
           K Y+ LL N  LVV+ +KCSG      PI   WSN +  F
Sbjct: 47  KNYMFLLCNG-LVVVVAKCSGLVASSKPIEKIWSNTDKTF 85


>At1g15670.1 68414.m01881 kelch repeat-containing F-box family
           protein similar to SP|Q9ER30 Kelch-related protein 1
           (Sarcosin) {Rattus norvegicus}; contains Pfam profiles
           PF01344: Kelch motif, PF00646: F-box domain
          Length = 359

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -2

Query: 469 CLKKYVKLLRNSSLVVISSKCSGTP-INSRWSNNNVAFTKRSWH 341
           C   YV + R+ +LVVI S   G P +   W  +N  + K   H
Sbjct: 301 CNVSYVAIRRSGNLVVIGSARYGEPSVGYNWDMSNSRWLKLETH 344


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,491,362
Number of Sequences: 28952
Number of extensions: 298748
Number of successful extensions: 747
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)