Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0523
         (691 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0079 + 5016115-5016936                                           31   0.65 
10_08_1008 - 22222051-22222377,22222479-22222640,22223179-222233...    31   1.1  
08_01_1081 + 11058119-11059756                                         30   2.0  
06_03_0900 - 25789327-25789662                                         29   3.5  
04_03_0893 - 20602008-20602361,20602455-20602604,20602723-206028...    29   3.5  
10_08_0585 - 18998013-18998306,18998448-18998630,18999048-189990...    28   6.1  
10_01_0075 - 979335-979954,980136-980405,980949-980989,981563-98...    28   6.1  
07_01_0404 + 3093851-3094051,3094622-3094948,3096685-3096798,309...    28   6.1  
07_01_0400 + 3048607-3048807,3049378-3049704,3051441-3051554,305...    28   6.1  
07_01_0396 + 3016900-3017175,3017926-3018039,3018138-3018350,301...    28   6.1  
06_01_0924 - 7131937-7132041,7132309-7132407,7132498-7132596,713...    28   6.1  
01_01_0070 - 542603-542686,542803-543441                               28   6.1  

>10_02_0079 + 5016115-5016936
          Length = 273

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +1

Query: 187 NRAQVPATGSAHLTPATAPRPKAQHPEDVPDP 282
           N A  P +G+AH  PA AP P  + P   P P
Sbjct: 33  NPAANPISGAAHSAPANAPPPATECPVPPPPP 64


>10_08_1008 -
           22222051-22222377,22222479-22222640,22223179-22223310,
           22224556-22224608,22224713-22225256
          Length = 405

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/59 (30%), Positives = 23/59 (38%)
 Frame = +1

Query: 202 PATGSAHLTPATAPRPKAQHPEDVPDPFIETISPRYAVDIAANQIAGYKEKNRHTKGGK 378
           PA  +A   PA AP P    P   P PF +   P  A   AA     + +      GG+
Sbjct: 14  PAPAAAAPPPAAAPAPPPSQPPPPPLPFAQQAPPPAANPAAAPMRLSFDQMAGKAPGGE 72


>08_01_1081 + 11058119-11059756
          Length = 545

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 11/108 (10%)
 Frame = +1

Query: 229 PATAPRPKAQHPEDVPDPFIETISPRYAVDIAANQIAGYKEKN--------RHTKGGKV- 381
           PAT+        +D   P +     + AVD   +   G   +N        RH  GG   
Sbjct: 87  PATSGSCSGAVDDDSSPPSLPPKKRKVAVDYRVDSFGGSGSRNRETPPAVTRHGGGGGAP 146

Query: 382 --KIEIDPAFAQDFR*RMLKSGQMRIKGNDRVINHHQTNT*PFDRLIH 519
                +DPA A + R R +K G+ ++     +     T   P ++L+H
Sbjct: 147 AGSTAMDPALANELRRREIKFGKRKVTAEAALTAPITTKLPPREKLMH 194


>06_03_0900 - 25789327-25789662
          Length = 111

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 193 AQVPATGSAHLTPATAPRPKAQHPEDVPDPFIETI 297
           A  P +    L  ATA  P++QH   + D FI+ I
Sbjct: 75  AATPTSSGLDLRQATAASPQSQHSVSIGDDFIDLI 109


>04_03_0893 -
           20602008-20602361,20602455-20602604,20602723-20602835,
           20603105-20603377,20603746-20603886,20604638-20604974
          Length = 455

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 326 AAISTAYRGEIVSINGSGTSSGCWALGRGAV 234
           AA +    G++V + G G   GCWA  R AV
Sbjct: 12  AAAAAENGGQVVVVVGGGWVDGCWARVRAAV 42


>10_08_0585 -
           18998013-18998306,18998448-18998630,18999048-18999089,
           18999226-18999495,18999903-19000454,19000546-19000770,
           19001435-19001640,19001738-19001936,19002166-19002381,
           19002887-19002991,19003127-19003243,19003366-19003548,
           19004292-19004468,19004714-19004816,19005066-19005523
          Length = 1109

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
 Frame = -2

Query: 507 IKGLCICLVVI-----YHSVITFYPHLTTFQHPLSEVLSKC 400
           IK LCI +  +     Y SVI F+PH  +   P   +L +C
Sbjct: 14  IKPLCIIIYTLVTVCGYKSVIKFFPHQVSDLEPAVALLEEC 54


>10_01_0075 -
           979335-979954,980136-980405,980949-980989,981563-981663
          Length = 343

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 199 VPATGSAH-LTPATAPRPKAQHPEDVPDPFIETISP 303
           +PAT +   L     P+P+ QHP   P P  E ISP
Sbjct: 143 MPATHTLRMLQHQPEPQPQLQHPPSPPHPKEECISP 178


>07_01_0404 + 3093851-3094051,3094622-3094948,3096685-3096798,
            3096897-3097109,3097975-3098151,3098270-3100091,
            3100107-3100927,3101070-3101390
          Length = 1331

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 297  NCLDKRIWNIFWVLGFGAWC 238
            NC D  IW    V+ FG WC
Sbjct: 1178 NCGDDCIWRASLVVSFGVWC 1197


>07_01_0400 + 3048607-3048807,3049378-3049704,3051441-3051554,
            3051653-3051865,3052731-3052907,3053026-3054847,
            3054863-3055683,3055826-3056146
          Length = 1331

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 297  NCLDKRIWNIFWVLGFGAWC 238
            NC D  IW    V+ FG WC
Sbjct: 1178 NCGDDCIWRASLVVSFGVWC 1197


>07_01_0396 + 3016900-3017175,3017926-3018039,3018138-3018350,
            3019216-3019392,3019511-3021332,3021348-3022168,
            3022311-3022631
          Length = 1247

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 297  NCLDKRIWNIFWVLGFGAWC 238
            NC D  IW    V+ FG WC
Sbjct: 1094 NCGDDCIWRASLVVSFGVWC 1113


>06_01_0924 -
           7131937-7132041,7132309-7132407,7132498-7132596,
           7132807-7132905,7133068-7133166,7133316-7133395,
           7133522-7133843
          Length = 300

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 316 DIAANQIAGYKEKNRHTKGGKVKIEIDPAFAQDFR 420
           DIA   +    +K R TK G+  ++I   F +DF+
Sbjct: 249 DIAKILLVNGADKTRRTKDGRTALDISLCFGRDFK 283


>01_01_0070 - 542603-542686,542803-543441
          Length = 240

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 202 PATGSAHLTPATAPRPKAQHPEDVP 276
           PA   A L PAT P P A+ P ++P
Sbjct: 132 PAEAPAALPPATTPPPVAEAPAELP 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,082,664
Number of Sequences: 37544
Number of extensions: 452527
Number of successful extensions: 1395
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)