Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0523
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF068713-16|AAD34663.1|  156|Caenorhabditis elegans Ground-like ...    31   1.0  
Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AL032655-5|CAA21723.1|  360|Caenorhabditis elegans Hypothetical ...    28   5.5  
U21310-1|AAA62519.1|  997|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z82084-7|CAB04979.2|  499|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.     27   9.6  

>AF068713-16|AAD34663.1|  156|Caenorhabditis elegans Ground-like
           (grd related) protein31 protein.
          Length = 156

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -3

Query: 329 FAAISTAYRGEIVSINGSGTSSGCWALGRGAVAGVKCAEP 210
           FA+I+TA  G +++I G     GC   G G   G  CA P
Sbjct: 11  FASITTACPG-LLNIFGGAGGGGCGGCGGGCGGGCGCAPP 49


>Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical
           protein K07A1.6 protein.
          Length = 100

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +3

Query: 231 SHCTTPQSPAPRRCSRSVYRDNFPTVRC 314
           S C  P  P   RC+   YRDN  T RC
Sbjct: 64  SQCKLPCIPYSCRCNPGFYRDNQGTGRC 91


>AL032655-5|CAA21723.1|  360|Caenorhabditis elegans Hypothetical
           protein Y6B3B.10 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -2

Query: 396 IYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNI 268
           IY  +YL P   P F  +   L+  +  +V W N + + IW +
Sbjct: 277 IYGAVYLGPQDAPFFPLLGAMLLIIFAMNVYWFNFIARMIWRV 319


>U21310-1|AAA62519.1|  997|Caenorhabditis elegans Hypothetical
           protein F40H6.2 protein.
          Length = 997

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 420 SEVLSKCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWG 298
           S V+++C    NLY     +  F FIS Y   R ++S+P G
Sbjct: 373 SSVITRCGHARNLYQYHDTVDNFVFISLYTFGRTVESLPLG 413


>Z82084-7|CAB04979.2|  499|Caenorhabditis elegans Hypothetical
           protein ZK1053.6 protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 2   LTATLSSTNKANSGSASTAKNFTYHEIDN 88
           +T +L +   ANS S  +  N TYH +DN
Sbjct: 178 ITPSLDNPTLANSTSLQSIHNDTYHYLDN 206


>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
           protein C10C5.6b protein.
          Length = 1782

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
 Frame = +1

Query: 247 PKAQHPEDVPDPFIETISP------RYAVDIAANQIAGYKEKNRHTKGGKVKIEIDPAFA 408
           P+A   +D P   +  + P      + A++I  +    Y++    +K  + KI  DP   
Sbjct: 86  PEAPSRKDAPSRLLSWVDPYKCGAHKAAIEIGLSTQRAYEKWQPKSKT-RYKICTDPPI- 143

Query: 409 QDFR*RMLKSGQMRIKGNDRVINHH 483
            D R   + +   RI GNDRV+ H+
Sbjct: 144 DDVR--KVATNLRRISGNDRVLFHY 166


>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
           protein C10C5.6a protein.
          Length = 1776

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
 Frame = +1

Query: 247 PKAQHPEDVPDPFIETISP------RYAVDIAANQIAGYKEKNRHTKGGKVKIEIDPAFA 408
           P+A   +D P   +  + P      + A++I  +    Y++    +K  + KI  DP   
Sbjct: 86  PEAPSRKDAPSRLLSWVDPYKCGAHKAAIEIGLSTQRAYEKWQPKSKT-RYKICTDPPI- 143

Query: 409 QDFR*RMLKSGQMRIKGNDRVINHH 483
            D R   + +   RI GNDRV+ H+
Sbjct: 144 DDVR--KVATNLRRISGNDRVLFHY 166


>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
           protein C10C5.6b protein.
          Length = 1782

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
 Frame = +1

Query: 247 PKAQHPEDVPDPFIETISP------RYAVDIAANQIAGYKEKNRHTKGGKVKIEIDPAFA 408
           P+A   +D P   +  + P      + A++I  +    Y++    +K  + KI  DP   
Sbjct: 86  PEAPSRKDAPSRLLSWVDPYKCGAHKAAIEIGLSTQRAYEKWQPKSKT-RYKICTDPPI- 143

Query: 409 QDFR*RMLKSGQMRIKGNDRVINHH 483
            D R   + +   RI GNDRV+ H+
Sbjct: 144 DDVR--KVATNLRRISGNDRVLFHY 166


>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
           protein C10C5.6a protein.
          Length = 1776

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
 Frame = +1

Query: 247 PKAQHPEDVPDPFIETISP------RYAVDIAANQIAGYKEKNRHTKGGKVKIEIDPAFA 408
           P+A   +D P   +  + P      + A++I  +    Y++    +K  + KI  DP   
Sbjct: 86  PEAPSRKDAPSRLLSWVDPYKCGAHKAAIEIGLSTQRAYEKWQPKSKT-RYKICTDPPI- 143

Query: 409 QDFR*RMLKSGQMRIKGNDRVINHH 483
            D R   + +   RI GNDRV+ H+
Sbjct: 144 DDVR--KVATNLRRISGNDRVLFHY 166


>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
          Length = 1800

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
 Frame = +1

Query: 247 PKAQHPEDVPDPFIETISP------RYAVDIAANQIAGYKEKNRHTKGGKVKIEIDPAFA 408
           P+A   +D P   +  + P      + A++I  +    Y++    +K  + KI  DP   
Sbjct: 110 PEAPSRKDAPSRLLSWVDPYKCGAHKAAIEIGLSTQRAYEKWQPKSKT-RYKICTDPPI- 167

Query: 409 QDFR*RMLKSGQMRIKGNDRVINHH 483
            D R   + +   RI GNDRV+ H+
Sbjct: 168 DDVR--KVATNLRRISGNDRVLFHY 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,491,139
Number of Sequences: 27780
Number of extensions: 367329
Number of successful extensions: 1133
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)