Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0522
         (664 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42699-1|AAA96754.1|  924|Drosophila melanogaster trachealess pr...    29   5.6  
U33427-1|AAA96257.1|  949|Drosophila melanogaster bHLH-PAS prote...    29   5.6  
AY094911-1|AAM11264.1|  902|Drosophila melanogaster RH17284p pro...    29   5.6  
AE014296-101|AAF47386.1|  958|Drosophila melanogaster CG6883-PA,...    29   5.6  
AE014296-100|ABI31226.1|  929|Drosophila melanogaster CG6883-PB,...    29   5.6  
AE014297-2733|AAF55719.1|  490|Drosophila melanogaster CG4770-PA...    29   7.5  

>U42699-1|AAA96754.1|  924|Drosophila melanogaster trachealess
           protein.
          Length = 924

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -3

Query: 299 ENVSCLARGMHRECRRAVSVRCCQVTAGPGGCSHEELANNDANDG 165
           +N+ C+   +       + + CCQ+   P    HEE   ND + G
Sbjct: 462 QNIICVNYVISNRENENMILDCCQLEPSPDSIKHEEGLGNDKSSG 506


>U33427-1|AAA96257.1|  949|Drosophila melanogaster bHLH-PAS protein
           protein.
          Length = 949

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -3

Query: 299 ENVSCLARGMHRECRRAVSVRCCQVTAGPGGCSHEELANNDANDG 165
           +N+ C+   +       + + CCQ+   P    HEE   ND + G
Sbjct: 487 QNIICVNYVISNRENENMILDCCQLEPSPDSIKHEEGLGNDKSSG 531


>AY094911-1|AAM11264.1|  902|Drosophila melanogaster RH17284p
           protein.
          Length = 902

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -3

Query: 299 ENVSCLARGMHRECRRAVSVRCCQVTAGPGGCSHEELANNDANDG 165
           +N+ C+   +       + + CCQ+   P    HEE   ND + G
Sbjct: 440 QNIICVNYVISNRENENMILDCCQLEPSPDSIKHEEGLGNDKSSG 484


>AE014296-101|AAF47386.1|  958|Drosophila melanogaster CG6883-PA,
           isoform A protein.
          Length = 958

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -3

Query: 299 ENVSCLARGMHRECRRAVSVRCCQVTAGPGGCSHEELANNDANDG 165
           +N+ C+   +       + + CCQ+   P    HEE   ND + G
Sbjct: 496 QNIICVNYVISNRENENMILDCCQLEPSPDSIKHEEGLGNDKSSG 540


>AE014296-100|ABI31226.1|  929|Drosophila melanogaster CG6883-PB,
           isoform B protein.
          Length = 929

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = -3

Query: 299 ENVSCLARGMHRECRRAVSVRCCQVTAGPGGCSHEELANNDANDG 165
           +N+ C+   +       + + CCQ+   P    HEE   ND + G
Sbjct: 467 QNIICVNYVISNRENENMILDCCQLEPSPDSIKHEEGLGNDKSSG 511


>AE014297-2733|AAF55719.1|  490|Drosophila melanogaster CG4770-PA
           protein.
          Length = 490

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 223 VTWQHLTDTALRHSRCIPLARQLTF 297
           +TWQHL +  ++ SR  P  R + F
Sbjct: 320 ITWQHLGELTMKWSRIYPTRRMIMF 344


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,851,100
Number of Sequences: 53049
Number of extensions: 464076
Number of successful extensions: 1199
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)