Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0521
         (476 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...   112   7e-25
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...   112   7e-25
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...   112   7e-25
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...   112   7e-25
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...   111   1e-24
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...   109   5e-24
AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.             29   6.3  
AK126225-1|BAC86496.1|  139|Homo sapiens protein ( Homo sapiens ...    29   8.3  

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  112 bits (269), Expect = 7e-25
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = +1

Query: 10  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 189
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 190 FHFRKNKNFCPVLNLDKLWTLV 255
           +H ++N++FCP +NLDKLWTLV
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLV 82



 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 29/88 (32%), Positives = 39/88 (44%)
 Frame = +3

Query: 189 FPL*KEQEFLSSFELR*ALDISSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 368
           + L + Q F  +  L     + SEQTR+  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 369 PVIVXXXXXXXXXXXXXXDVGGACVLSA 452
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  112 bits (269), Expect = 7e-25
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = +1

Query: 10  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 189
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 190 FHFRKNKNFCPVLNLDKLWTLV 255
           +H ++N++FCP +NLDKLWTLV
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLV 82



 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 29/88 (32%), Positives = 39/88 (44%)
 Frame = +3

Query: 189 FPL*KEQEFLSSFELR*ALDISSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 368
           + L + Q F  +  L     + SEQTR+  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 369 PVIVXXXXXXXXXXXXXXDVGGACVLSA 452
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score =  112 bits (269), Expect = 7e-25
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = +1

Query: 10  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 189
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 190 FHFRKNKNFCPVLNLDKLWTLV 255
           +H ++N++FCP +NLDKLWTLV
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLV 82


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score =  112 bits (269), Expect = 7e-25
 Identities = 47/82 (57%), Positives = 58/82 (70%)
 Frame = +1

Query: 10  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 189
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 190 FHFRKNKNFCPVLNLDKLWTLV 255
           +H ++N++FCP +NLDKLWTLV
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLV 82



 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 29/88 (32%), Positives = 39/88 (44%)
 Frame = +3

Query: 189 FPL*KEQEFLSSFELR*ALDISSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 368
           + L + Q F  +  L     + SEQTR+  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 369 PVIVXXXXXXXXXXXXXXDVGGACVLSA 452
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score =  111 bits (267), Expect = 1e-24
 Identities = 46/77 (59%), Positives = 56/77 (72%)
 Frame = +1

Query: 25  KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 204
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 5   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 64

Query: 205 NKNFCPVLNLDKLWTLV 255
           N++FCP +NLDKLWTLV
Sbjct: 65  NQSFCPTVNLDKLWTLV 81



 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 29/88 (32%), Positives = 39/88 (44%)
 Frame = +3

Query: 189 FPL*KEQEFLSSFELR*ALDISSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 368
           + L + Q F  +  L     + SEQTR+  A    G  P+I++V++           PKQ
Sbjct: 60  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 119

Query: 369 PVIVXXXXXXXXXXXXXXDVGGACVLSA 452
           PVIV               VGGACVL A
Sbjct: 120 PVIVKAKFFSRRAEEKIKSVGGACVLVA 147


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  109 bits (262), Expect = 5e-24
 Identities = 46/82 (56%), Positives = 58/82 (70%)
 Frame = +1

Query: 10  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 189
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 190 FHFRKNKNFCPVLNLDKLWTLV 255
           ++ ++N++FCP +NLDKLWTLV
Sbjct: 61  YNLKRNQSFCPTVNLDKLWTLV 82



 Score = 44.8 bits (101), Expect = 2e-04
 Identities = 28/88 (31%), Positives = 38/88 (43%)
 Frame = +3

Query: 189 FPL*KEQEFLSSFELR*ALDISSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 368
           + L + Q F  +  L     + SEQTR+  A    G  P+I++V++            KQ
Sbjct: 61  YNLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQ 120

Query: 369 PVIVXXXXXXXXXXXXXXDVGGACVLSA 452
           PVIV               VGGACVL A
Sbjct: 121 PVIVKAKLFSRRAEEKIKSVGGACVLVA 148


>AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.
          Length = 126

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -1

Query: 179 PSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP---*LT*PLSFLVF 27
           P+LPK+PG  ++ L   W S    P P G +    + PCP       PL FLV+
Sbjct: 55  PALPKWPGHLMAELQGPWLSLAHCPSPSGPI----VLPCPFRVQFEPPLQFLVW 104


>AK126225-1|BAC86496.1|  139|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44237 fis, clone THYMU3007845. ).
          Length = 139

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 12/43 (27%), Positives = 15/43 (34%)
 Frame = +2

Query: 323 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGCGWCLCTIC 451
           +W L      Q PQ        + L   R   + C WC C  C
Sbjct: 71  AWFLSPVHHSQIPQLAACPLQSLRLSKPRSPGRCCAWCGCLNC 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,083,118
Number of Sequences: 237096
Number of extensions: 1367935
Number of successful extensions: 2854
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2847
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)