Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0519
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    29   0.047
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.77 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   1.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   1.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   1.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   1.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.5  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   9.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.5  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 28.7 bits (61), Expect = 0.047
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -1

Query: 463 TPESLLFSEAQGSPPATNLTTFSRWSDSQVSSLA 362
           TPE + + E  G P  T+ T    WSD Q  SLA
Sbjct: 389 TPEIITYLEKNGKPRTTD-TFLDLWSDYQNKSLA 421


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 7/35 (20%)
 Frame = -1

Query: 427 SPPATNLTTFSRW-------SDSQVSSLAPPGNPP 344
           SPP   +  FS+        SDS V +L+ PG PP
Sbjct: 199 SPPGDGILDFSKRGQKSDADSDSDVVNLSKPGTPP 233


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -1

Query: 430 GSPPATNLTTFSRWSDSQVSSLAPP-GNPPVRTAVR 326
           G+PP    T F RW +SQ     P    P   TAV+
Sbjct: 11  GAPPQEMPTWFVRWLNSQQPRNVPNFAAPSTSTAVQ 46


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 427 SPPATNLTTFSRWSDSQVSSLAPPGNPPVRTAVRSAPVP 311
           +P  +N T  S  +     S +PPG P   TA ++   P
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 427 SPPATNLTTFSRWSDSQVSSLAPPGNPPVRTAVRSAPVP 311
           +P  +N T  S  +     S +PPG P   TA ++   P
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 427 SPPATNLTTFSRWSDSQVSSLAPPGNPPVRTAVRSAPVP 311
           +P  +N T  S  +     S +PPG P   TA ++   P
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 427 SPPATNLTTFSRWSDSQVSSLAPPGNPPVRTAVRSAPVP 311
           +P  +N T  S  +     S +PPG P   TA ++   P
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 427 SPPATNLTTFSRWSDSQVSSLAPPGNPPVRTAVRSAPVP 311
           +P  +N T  S  +     S +PPG P   TA ++   P
Sbjct: 87  TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 125


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 427 SPPATNLTTFSRWSDSQVSSLAPPGNPPVRTAVRSAPVP 311
           +P  +N T  S  +     S +PPG P   TA ++   P
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 427 SPPATNLTTFSRWSDSQVSSLAPPGNPPVRTAVRSAPVP 311
           +P  +N T  S  +     S +PPG P   TA ++   P
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSP 169


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 478 NEELLTPESLLFSEAQG 428
           NE+LL  E LLF+E  G
Sbjct: 339 NEQLLRKELLLFAEQMG 355


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 589 FVSGDIGWRDLRT 551
           F+S D  WR+LRT
Sbjct: 116 FISKDAVWRNLRT 128


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -1

Query: 427 SPPATNLTTFSRWSDSQVSSLAPPGNPPVRTAVRSAPVP 311
           +P  +N T  S  +     S +PPG P   T  ++   P
Sbjct: 131 TPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSP 169


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -2

Query: 498 DEDEPNSTKNYS--LPNRCSSLKRRAHR 421
           DE+E +STK+Y+  L  R S + R   R
Sbjct: 128 DEEEKSSTKHYAALLTERSSLVLRNDFR 155


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 561 SRHPISPLTKNLHYTR 608
           +RH I  L K  HY R
Sbjct: 241 TRHQILELEKEFHYNR 256


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 561 SRHPISPLTKNLHYTR 608
           +RH I  L K  HY R
Sbjct: 241 TRHQILELEKEFHYNR 256


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 234 LGGPLIGFVCAVY 196
           +GG L+G +CA++
Sbjct: 12  VGGGLVGSLCAIF 24


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 234 LGGPLIGFVCAVY 196
           +GG L+G +CA++
Sbjct: 12  VGGGLVGSLCAIF 24


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 234 LGGPLIGFVCAVY 196
           +GG L+G +CA++
Sbjct: 12  VGGGLVGSLCAIF 24


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 561 SRHPISPLTKNLHYTR 608
           +RH I  L K  HY R
Sbjct: 241 TRHQILELEKEFHYNR 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,076
Number of Sequences: 336
Number of extensions: 2739
Number of successful extensions: 23
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)