Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0519
(688 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003573-1|AAO39577.1| 952|Drosophila melanogaster LD40351p pro... 38 0.010
AY070555-1|AAL48026.1| 952|Drosophila melanogaster LD31046p pro... 38 0.010
AY069847-1|AAL39992.1| 778|Drosophila melanogaster SD09611p pro... 38 0.010
AY061072-1|AAL28620.1| 237|Drosophila melanogaster LD04190p pro... 38 0.010
AE014297-3107|AAF55958.2| 952|Drosophila melanogaster CG31163-P... 38 0.010
AE014297-3106|ABI31193.1| 1056|Drosophila melanogaster CG31163-P... 38 0.010
AE014298-1837|ABI30979.1| 653|Drosophila melanogaster CG15720-P... 33 0.37
AE014298-1836|AAF48220.1| 583|Drosophila melanogaster CG15720-P... 33 0.37
BT001364-1|AAN71119.1| 124|Drosophila melanogaster AT30014p pro... 29 6.0
AY113267-1|AAM29272.1| 396|Drosophila melanogaster AT16233p pro... 29 6.0
AY089489-1|AAL90227.1| 396|Drosophila melanogaster AT31848p pro... 29 6.0
AY089480-1|AAL90218.1| 180|Drosophila melanogaster AT29351p pro... 29 6.0
AE014297-1459|AAF54757.2| 396|Drosophila melanogaster CG3809-PA... 29 6.0
BT011082-1|AAR82748.1| 468|Drosophila melanogaster RH73646p pro... 29 7.9
AY061521-1|AAL29069.1| 350|Drosophila melanogaster LD47568p pro... 29 7.9
AJ620303-1|CAF04330.1| 350|Drosophila melanogaster THO complex ... 29 7.9
AE014297-2419|AAO41573.1| 1513|Drosophila melanogaster CG31247-P... 29 7.9
AE014297-2418|AAO41572.1| 1513|Drosophila melanogaster CG31247-P... 29 7.9
AE014296-2112|AAF49944.1| 350|Drosophila melanogaster CG5632-PA... 29 7.9
>BT003573-1|AAO39577.1| 952|Drosophila melanogaster LD40351p
protein.
Length = 952
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +1
Query: 106 PFGRRQFPRDSGCYEXXXXXXXXXXXTSPLVHRTDEPN 219
PFGRR FPRDSGCYE + V+ TDE N
Sbjct: 834 PFGRRHFPRDSGCYE--GSPLPSSQTPTQAVNSTDESN 869
>AY070555-1|AAL48026.1| 952|Drosophila melanogaster LD31046p
protein.
Length = 952
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +1
Query: 106 PFGRRQFPRDSGCYEXXXXXXXXXXXTSPLVHRTDEPN 219
PFGRR FPRDSGCYE + V+ TDE N
Sbjct: 834 PFGRRHFPRDSGCYE--GSPLPSSQTPTQAVNSTDESN 869
>AY069847-1|AAL39992.1| 778|Drosophila melanogaster SD09611p
protein.
Length = 778
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +1
Query: 106 PFGRRQFPRDSGCYEXXXXXXXXXXXTSPLVHRTDEPN 219
PFGRR FPRDSGCYE + V+ TDE N
Sbjct: 660 PFGRRHFPRDSGCYE--GSPLPSSQTPTQAVNSTDESN 695
>AY061072-1|AAL28620.1| 237|Drosophila melanogaster LD04190p
protein.
Length = 237
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +1
Query: 106 PFGRRQFPRDSGCYEXXXXXXXXXXXTSPLVHRTDEPN 219
PFGRR FPRDSGCYE + V+ TDE N
Sbjct: 119 PFGRRHFPRDSGCYE--GSPLPSSQTPTQAVNSTDESN 154
>AE014297-3107|AAF55958.2| 952|Drosophila melanogaster CG31163-PB,
isoform B protein.
Length = 952
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +1
Query: 106 PFGRRQFPRDSGCYEXXXXXXXXXXXTSPLVHRTDEPN 219
PFGRR FPRDSGCYE + V+ TDE N
Sbjct: 834 PFGRRHFPRDSGCYE--GSPLPSSQTPTQAVNSTDESN 869
>AE014297-3106|ABI31193.1| 1056|Drosophila melanogaster CG31163-PD,
isoform D protein.
Length = 1056
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +1
Query: 106 PFGRRQFPRDSGCYEXXXXXXXXXXXTSPLVHRTDEPN 219
PFGRR FPRDSGCYE + V+ TDE N
Sbjct: 938 PFGRRHFPRDSGCYE--GSPLPSSQTPTQAVNSTDESN 973
>AE014298-1837|ABI30979.1| 653|Drosophila melanogaster CG15720-PB,
isoform B protein.
Length = 653
Score = 33.1 bits (72), Expect = 0.37
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 186 ITTSTPHRRTQSTAPRARTASQTSIRRRQPDDAEC----DRIERYPGTGAERTAVRTGGL 353
IT+S T TAP+ R SQT R D++ +R R + TA G L
Sbjct: 308 ITSSVTPPATSPTAPKGRRDSQTQCGRVNRRDSKAGVSPERAPRLQRLQRQATAFDEGCL 367
Query: 354 PGGAR 368
PGG+R
Sbjct: 368 PGGSR 372
>AE014298-1836|AAF48220.1| 583|Drosophila melanogaster CG15720-PA,
isoform A protein.
Length = 583
Score = 33.1 bits (72), Expect = 0.37
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 186 ITTSTPHRRTQSTAPRARTASQTSIRRRQPDDAEC----DRIERYPGTGAERTAVRTGGL 353
IT+S T TAP+ R SQT R D++ +R R + TA G L
Sbjct: 333 ITSSVTPPATSPTAPKGRRDSQTQCGRVNRRDSKAGVSPERAPRLQRLQRQATAFDEGCL 392
Query: 354 PGGAR 368
PGG+R
Sbjct: 393 PGGSR 397
>BT001364-1|AAN71119.1| 124|Drosophila melanogaster AT30014p
protein.
Length = 124
Score = 29.1 bits (62), Expect = 6.0
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 405 RHSAGGQIRRCRL*PRQATHP-CVQPFAQLLYRDNVL-FCRIRRHQAVAV*LTFGLRCGL 232
R G I+ RL R HP Q F+ ++R + FC + H+ + L G+ G
Sbjct: 3 RRVFGLSIKSFRLFRRTPIHPPAFQHFSGGVFRTSFRSFCDCQEHRRMD--LPEGILMGF 60
Query: 231 GGPLIGFVCAV 199
G PL+ C V
Sbjct: 61 GNPLLDITCTV 71
>AY113267-1|AAM29272.1| 396|Drosophila melanogaster AT16233p
protein.
Length = 396
Score = 29.1 bits (62), Expect = 6.0
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 405 RHSAGGQIRRCRL*PRQATHP-CVQPFAQLLYRDNVL-FCRIRRHQAVAV*LTFGLRCGL 232
R G I+ RL R HP Q F+ ++R + FC + H+ + L G+ G
Sbjct: 3 RRVFGLSIKSFRLFRRTPIHPPAFQHFSGGVFRTSFRSFCDCQEHRRMD--LPEGILMGF 60
Query: 231 GGPLIGFVCAV 199
G PL+ C V
Sbjct: 61 GNPLLDITCTV 71
>AY089489-1|AAL90227.1| 396|Drosophila melanogaster AT31848p
protein.
Length = 396
Score = 29.1 bits (62), Expect = 6.0
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 405 RHSAGGQIRRCRL*PRQATHP-CVQPFAQLLYRDNVL-FCRIRRHQAVAV*LTFGLRCGL 232
R G I+ RL R HP Q F+ ++R + FC + H+ + L G+ G
Sbjct: 3 RRVFGLSIKSFRLFRRTPIHPPAFQHFSGGVFRTSFRSFCDCQEHRRMD--LPEGILMGF 60
Query: 231 GGPLIGFVCAV 199
G PL+ C V
Sbjct: 61 GNPLLDITCTV 71
>AY089480-1|AAL90218.1| 180|Drosophila melanogaster AT29351p
protein.
Length = 180
Score = 29.1 bits (62), Expect = 6.0
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 405 RHSAGGQIRRCRL*PRQATHP-CVQPFAQLLYRDNVL-FCRIRRHQAVAV*LTFGLRCGL 232
R G I+ RL R HP Q F+ ++R + FC + H+ + L G+ G
Sbjct: 3 RRVFGLSIKSFRLFRRTPIHPPAFQHFSGGVFRTSFRSFCDCQEHRRMD--LPEGILMGF 60
Query: 231 GGPLIGFVCAV 199
G PL+ C V
Sbjct: 61 GNPLLDITCTV 71
>AE014297-1459|AAF54757.2| 396|Drosophila melanogaster CG3809-PA
protein.
Length = 396
Score = 29.1 bits (62), Expect = 6.0
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 405 RHSAGGQIRRCRL*PRQATHP-CVQPFAQLLYRDNVL-FCRIRRHQAVAV*LTFGLRCGL 232
R G I+ RL R HP Q F+ ++R + FC + H+ + L G+ G
Sbjct: 3 RRVFGLSIKSFRLFRRTPIHPPAFQHFSGGVFRTSFRSFCDCQEHRRMD--LPEGILMGF 60
Query: 231 GGPLIGFVCAV 199
G PL+ C V
Sbjct: 61 GNPLLDITCTV 71
>BT011082-1|AAR82748.1| 468|Drosophila melanogaster RH73646p
protein.
Length = 468
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 379 QVSSLAPPGNPPVRTAVRSAPVPG*RSILSHSA 281
Q S+ APP PP+ ++ APVP +++ HSA
Sbjct: 79 QPSAQAPPPPPPL--PIKGAPVPQPPAVMPHSA 109
>AY061521-1|AAL29069.1| 350|Drosophila melanogaster LD47568p
protein.
Length = 350
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 584 DKKPPLYSNVNNDSEAPEDSDLLVVRPL 667
D K +Y NV + PE+ D L+ +PL
Sbjct: 318 DSKIEMYGNVEGEENDPEEEDELIEKPL 345
>AJ620303-1|CAF04330.1| 350|Drosophila melanogaster THO complex 6
protein.
Length = 350
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 584 DKKPPLYSNVNNDSEAPEDSDLLVVRPL 667
D K +Y NV + PE+ D L+ +PL
Sbjct: 318 DSKIEMYGNVEGEENDPEEEDELIEKPL 345
>AE014297-2419|AAO41573.1| 1513|Drosophila melanogaster CG31247-PD,
isoform D protein.
Length = 1513
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 379 QVSSLAPPGNPPVRTAVRSAPVPG*RSILSHSA 281
Q S+ APP PP+ ++ APVP +++ HSA
Sbjct: 1124 QPSAQAPPPPPPL--PIKGAPVPQPPAVMPHSA 1154
>AE014297-2418|AAO41572.1| 1513|Drosophila melanogaster CG31247-PA,
isoform A protein.
Length = 1513
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 379 QVSSLAPPGNPPVRTAVRSAPVPG*RSILSHSA 281
Q S+ APP PP+ ++ APVP +++ HSA
Sbjct: 1124 QPSAQAPPPPPPL--PIKGAPVPQPPAVMPHSA 1154
>AE014296-2112|AAF49944.1| 350|Drosophila melanogaster CG5632-PA
protein.
Length = 350
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 584 DKKPPLYSNVNNDSEAPEDSDLLVVRPL 667
D K +Y NV + PE+ D L+ +PL
Sbjct: 318 DSKIEMYGNVEGEENDPEEEDELIEKPL 345
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,502,242
Number of Sequences: 53049
Number of extensions: 632307
Number of successful extensions: 2665
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2663
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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