Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0519
         (688 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    25   0.89 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.7  
DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II lar...    23   3.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   3.6  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.6  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   6.3  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       21   8.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   8.3  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 572 YIPADKKPPLYSNVNNDSEAPEDSDLLVVRPLVSPH 679
           Y+P  K PP    + +  EA +D+D+L     V PH
Sbjct: 64  YLPGHKLPPNIIAIPDVVEAAKDADILT---FVVPH 96


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 391 WSDSQVSSLAPPGNPPVRTAVRSA 320
           WS+SQV  +A PG+  V +  + A
Sbjct: 908 WSNSQVQGVAVPGSGIVASGQQHA 931


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 574 IGWRDLRTHP 545
           +GW+D R+HP
Sbjct: 202 VGWKDKRSHP 211


>DQ069332-1|AAZ32217.1|  296|Apis mellifera RNA polymerase II large
           subunit protein.
          Length = 296

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 391 WSDSQVSSLAPPGN 350
           W+  Q+SSL  PGN
Sbjct: 47  WTGKQISSLIIPGN 60


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 136 NHEGTVVDQTASLLLRNWNRHRQFHRQLLH 47
           +H+G+V+D   S  L     H Q H Q  H
Sbjct: 149 DHQGSVLDGPDSPPLVESQMHHQMHTQHPH 178


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -1

Query: 292 SHSASSGCRRLIDVWLAVRARGAV-DWV 212
           + S +S  ++LID W+A    G+V +WV
Sbjct: 322 NQSTASDFKQLIDRWVANVPNGSVTNWV 349


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 186 ITTSTPHRRTQSTAPRARTASQTSIR 263
           +TT+     +Q   PRA   S TS++
Sbjct: 726 LTTNNTSNNSQLQIPRASLVSTTSVK 751


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1

Query: 229 PEPAPQAKRQSDGDS 273
           PEPAP+ + ++D ++
Sbjct: 25  PEPAPEPEAEADAEA 39


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = +3

Query: 573 ISPLTKNLHYT 605
           +SPLT+NL+Y+
Sbjct: 256 LSPLTQNLYYS 266


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,768
Number of Sequences: 438
Number of extensions: 3586
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)