BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0518 (651 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 108 6e-25 SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 63 4e-11 SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 49 7e-07 SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 39 7e-04 SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 38 0.001 SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 37 0.002 SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 31 0.19 SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.25 SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.44 SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.77 SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 4.1 SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 5.4 SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 7.2 SPAPB1A10.11c |||glutamyl-tRNA synthetase, mitochondrial|Schizos... 25 7.2 >SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosaccharomyces pombe|chr 2|||Manual Length = 322 Score = 108 bits (260), Expect = 6e-25 Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 1/85 (1%) Frame = +1 Query: 256 GGISAAVSKTAVATIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432 GG+SAAVSKTA A IERVKLL+Q Q + + RYKGI + F R E+G++S WRG Sbjct: 34 GGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRG 93 Query: 433 NFANVIRYFPTQALNFAFKDKYKQV 507 N ANV+RYFPTQALNFAFKDK+K++ Sbjct: 94 NTANVLRYFPTQALNFAFKDKFKKM 118 Score = 35.1 bits (77), Expect = 0.009 Identities = 21/87 (24%), Positives = 39/87 (44%) Frame = +1 Query: 247 LPGGGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426 L GG + A S V +++ + L S + ++++ G+VD + + + GL + Sbjct: 136 LASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLY 195 Query: 427 RGNFANVIRYFPTQALNFAFKDKYKQV 507 RG +V+ + L F D K V Sbjct: 196 RGFGPSVVGIVVYRGLYFGMYDTLKPV 222 >SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 317 Score = 62.9 bits (146), Expect = 4e-11 Identities = 32/83 (38%), Positives = 51/83 (61%) Frame = +1 Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435 GG++A VS+TAV+ +ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN Sbjct: 27 GGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGN 79 Query: 436 FANVIRYFPTQALNFAFKDKYKQ 504 N +R FP A+ FA + KQ Sbjct: 80 GTNCLRAFPYGAVQFATFNMLKQ 102 Score = 33.5 bits (73), Expect = 0.027 Identities = 17/75 (22%), Positives = 34/75 (45%) Frame = +1 Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435 GG + + +T + ++ QV + YK I A I K +G+ F+RG Sbjct: 233 GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGY 289 Query: 436 FANVIRYFPTQALNF 480 +N+++ P ++ + Sbjct: 290 SSNMLKIIPVMSITW 304 >SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 326 Score = 48.8 bits (111), Expect = 7e-07 Identities = 27/84 (32%), Positives = 45/84 (53%) Frame = +1 Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435 GG + V+K+ VA ++RVK+L Q H S + A R+ G+ A I GL ++G+ Sbjct: 24 GGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGH 82 Query: 436 FANVIRYFPTQALNFAFKDKYKQV 507 A + R FP + F ++ ++V Sbjct: 83 TATLYRVFPYAGIKFVAYEQVRRV 106 >SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamily|Schizosaccharomyces pombe|chr 2|||Manual Length = 426 Score = 38.7 bits (86), Expect = 7e-04 Identities = 20/83 (24%), Positives = 39/83 (46%) Frame = +1 Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435 G +S + T V + ++ LQ Q S A Y G +D F + K +G ++G Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGL 398 Query: 436 FANVIRYFPTQALNFAFKDKYKQ 504 N+++ P+ A+++ + K+ Sbjct: 399 SPNLLKVAPSVAISYLVYENCKK 421 Score = 27.9 bits (59), Expect = 1.3 Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 1/93 (1%) Frame = +1 Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRG 432 GG++ +V++ + ++ +K +Q +S+ Q K I+ + + + K G+ ++RG Sbjct: 235 GGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRG 290 Query: 433 NFANVIRYFPTQALNFAFKDKYKQVSSAALTRR 531 ++ FP A + + K+ L R Sbjct: 291 VLVGILGMFPYSATDLGTFEGLKRTWIGILASR 323 >SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 298 Score = 38.3 bits (85), Expect = 0.001 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 3/94 (3%) Frame = +1 Query: 286 AVATIERVKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 456 AVA I V L L V Q++ + Y G D +I K +G +RG ++ Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75 Query: 457 FPTQALNFAFKDKYKQVSSAALTRRRSSGVTSLV 558 P +AL FA D Y ++ R+ SS S++ Sbjct: 76 APKRALKFASNDTYSKLWRKVFKRKDSSPALSIL 109 Score = 30.7 bits (66), Expect = 0.19 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%) Frame = +1 Query: 259 GISAAVSKT-AVATIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432 G A ++T V E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G Sbjct: 111 GSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNG 163 Query: 433 NFANVIRYFPTQALNFAFKDKYKQVSSAALTR 528 A + R+ A F K + + A +R Sbjct: 164 FEATMWRHVVWNAGYFGVIQKIRNSLTPASSR 195 >SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 303 Score = 37.1 bits (82), Expect = 0.002 Identities = 23/84 (27%), Positives = 44/84 (52%) Frame = +1 Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435 GG+S A++ + ++ VK LLQ + S I ++ KG +D I G+ SF++G Sbjct: 211 GGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFKGI 269 Query: 436 FANVIRYFPTQALNFAFKDKYKQV 507 ++ P A+++A + K++ Sbjct: 270 RPRMVVAMPATAVSWAAYEAGKEI 293 >SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 291 Score = 30.7 bits (66), Expect = 0.19 Identities = 16/77 (20%), Positives = 34/77 (44%) Frame = +1 Query: 277 SKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 456 S + T+ + + V+ + ++A + YK + +I + GLL FW G + R Sbjct: 211 SVAGIITVYCTQPIDTVKSRMQSLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARL 270 Query: 457 FPTQALNFAFKDKYKQV 507 + + F +K ++ Sbjct: 271 ILSGGIVFTVYEKVMEI 287 >SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 361 Score = 30.3 bits (65), Expect = 0.25 Identities = 20/78 (25%), Positives = 36/78 (46%) Frame = +1 Query: 247 LPGGGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426 L G GI+ ++ E V+ L+ S I +Y G++ F + EQG++ + Sbjct: 276 LGGAGIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLY 332 Query: 427 RGNFANVIRYFPTQALNF 480 G A+++R P + F Sbjct: 333 GGLTAHLLRVVPNACILF 350 >SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharomyces pombe|chr 2|||Manual Length = 314 Score = 29.5 bits (63), Expect = 0.44 Identities = 19/85 (22%), Positives = 37/85 (43%) Frame = +1 Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435 GGIS+ + + +A + +K+ +Q+ S + F +++G+ + WRGN Sbjct: 23 GGISSVICRFMIAPFDVIKIRMQITQSSLR-----------PVFKETVQKEGVRALWRGN 71 Query: 436 FANVIRYFPTQALNFAFKDKYKQVS 510 + Y A F K K ++ Sbjct: 72 VVAELLYLVYGAAEFVAFSKLKHLT 96 >SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces pombe|chr 1|||Manual Length = 371 Score = 28.7 bits (61), Expect = 0.77 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 349 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 447 A Y DAF +I K +GL +F+RG F ++ Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257 Score = 26.2 bits (55), Expect = 4.1 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 3/85 (3%) Frame = +1 Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFW 426 GG + S VA ++ VK Q Q + G + + I +G+ + Sbjct: 12 GGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLY 71 Query: 427 RGNFANVIRYFPTQALNFAFKDKYK 501 RG ++ Y P+ ++ F +K K Sbjct: 72 RGVGPMMLGYLPSWSIYFVVYEKCK 96 >SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces pombe|chr 1|||Manual Length = 897 Score = 26.2 bits (55), Expect = 4.1 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = +1 Query: 85 YEITPNLLFKNQELVFRDPPSACAATPTSTY 177 YE+ N F N PP AC+ TS Y Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392 >SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1072 Score = 25.8 bits (54), Expect = 5.4 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -2 Query: 389 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMVATAV 282 T+ + + + WSA I +LT C SLT S+ T + Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568 >SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr 1|||Manual Length = 271 Score = 25.4 bits (53), Expect = 7.2 Identities = 9/31 (29%), Positives = 17/31 (54%) Frame = +1 Query: 373 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 465 +++ + + +GL F+RG + V Y PT Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149 >SPAPB1A10.11c |||glutamyl-tRNA synthetase, mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual Length = 526 Score = 25.4 bits (53), Expect = 7.2 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Frame = +1 Query: 247 LPGGGISAAVSKTAVATIER--VKLLLQVQH 333 LPGGGIS +S T++ +LLL ++H Sbjct: 487 LPGGGISDTISLLGKETVKSRLERLLLSLKH 517 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,450,820 Number of Sequences: 5004 Number of extensions: 45141 Number of successful extensions: 145 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 143 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 293780908 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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