Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0518
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 108 6e-25
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 63 4e-11
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 49 7e-07
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 39 7e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 38 0.001
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 37 0.002
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 31 0.19
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.25
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.44
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.77
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 4.1
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 5.4
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 7.2
SPAPB1A10.11c |||glutamyl-tRNA synthetase, mitochondrial|Schizos... 25 7.2
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 108 bits (260), Expect = 6e-25
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 GGISAAVSKTAVATIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432
GG+SAAVSKTA A IERVKLL+Q Q + + RYKGI + F R E+G++S WRG
Sbjct: 34 GGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRG 93
Query: 433 NFANVIRYFPTQALNFAFKDKYKQV 507
N ANV+RYFPTQALNFAFKDK+K++
Sbjct: 94 NTANVLRYFPTQALNFAFKDKFKKM 118
Score = 35.1 bits (77), Expect = 0.009
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426
L GG + A S V +++ + L S + ++++ G+VD + + + GL +
Sbjct: 136 LASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLY 195
Query: 427 RGNFANVIRYFPTQALNFAFKDKYKQV 507
RG +V+ + L F D K V
Sbjct: 196 RGFGPSVVGIVVYRGLYFGMYDTLKPV 222
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 62.9 bits (146), Expect = 4e-11
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GG++A VS+TAV+ +ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN
Sbjct: 27 GGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGN 79
Query: 436 FANVIRYFPTQALNFAFKDKYKQ 504
N +R FP A+ FA + KQ
Sbjct: 80 GTNCLRAFPYGAVQFATFNMLKQ 102
Score = 33.5 bits (73), Expect = 0.027
Identities = 17/75 (22%), Positives = 34/75 (45%)
Frame = +1
Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GG + + +T + ++ QV + YK I A I K +G+ F+RG
Sbjct: 233 GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGY 289
Query: 436 FANVIRYFPTQALNF 480
+N+++ P ++ +
Sbjct: 290 SSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 48.8 bits (111), Expect = 7e-07
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +1
Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GG + V+K+ VA ++RVK+L Q H S + A R+ G+ A I GL ++G+
Sbjct: 24 GGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGH 82
Query: 436 FANVIRYFPTQALNFAFKDKYKQV 507
A + R FP + F ++ ++V
Sbjct: 83 TATLYRVFPYAGIKFVAYEQVRRV 106
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 38.7 bits (86), Expect = 7e-04
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = +1
Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
G +S + T V + ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 436 FANVIRYFPTQALNFAFKDKYKQ 504
N+++ P+ A+++ + K+
Sbjct: 399 SPNLLKVAPSVAISYLVYENCKK 421
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +1
Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRG 432
GG++ +V++ + ++ +K +Q +S+ Q K I+ + + + K G+ ++RG
Sbjct: 235 GGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRG 290
Query: 433 NFANVIRYFPTQALNFAFKDKYKQVSSAALTRR 531
++ FP A + + K+ L R
Sbjct: 291 VLVGILGMFPYSATDLGTFEGLKRTWIGILASR 323
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 38.3 bits (85), Expect = 0.001
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +1
Query: 286 AVATIERVKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 456
AVA I V L L V Q++ + Y G D +I K +G +RG ++
Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75
Query: 457 FPTQALNFAFKDKYKQVSSAALTRRRSSGVTSLV 558
P +AL FA D Y ++ R+ SS S++
Sbjct: 76 APKRALKFASNDTYSKLWRKVFKRKDSSPALSIL 109
Score = 30.7 bits (66), Expect = 0.19
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 259 GISAAVSKT-AVATIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 432
G A ++T V E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G
Sbjct: 111 GSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNG 163
Query: 433 NFANVIRYFPTQALNFAFKDKYKQVSSAALTR 528
A + R+ A F K + + A +R
Sbjct: 164 FEATMWRHVVWNAGYFGVIQKIRNSLTPASSR 195
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/84 (27%), Positives = 44/84 (52%)
Frame = +1
Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GG+S A++ + ++ VK LLQ + S I ++ KG +D I G+ SF++G
Sbjct: 211 GGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFKGI 269
Query: 436 FANVIRYFPTQALNFAFKDKYKQV 507
++ P A+++A + K++
Sbjct: 270 RPRMVVAMPATAVSWAAYEAGKEI 293
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 30.7 bits (66), Expect = 0.19
Identities = 16/77 (20%), Positives = 34/77 (44%)
Frame = +1
Query: 277 SKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 456
S + T+ + + V+ + ++A + YK + +I + GLL FW G + R
Sbjct: 211 SVAGIITVYCTQPIDTVKSRMQSLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARL 270
Query: 457 FPTQALNFAFKDKYKQV 507
+ + F +K ++
Sbjct: 271 ILSGGIVFTVYEKVMEI 287
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.25
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 426
L G GI+ ++ E V+ L+ S I +Y G++ F + EQG++ +
Sbjct: 276 LGGAGIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLY 332
Query: 427 RGNFANVIRYFPTQALNF 480
G A+++R P + F
Sbjct: 333 GGLTAHLLRVVPNACILF 350
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.5 bits (63), Expect = 0.44
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = +1
Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 435
GGIS+ + + +A + +K+ +Q+ S + F +++G+ + WRGN
Sbjct: 23 GGISSVICRFMIAPFDVIKIRMQITQSSLR-----------PVFKETVQKEGVRALWRGN 71
Query: 436 FANVIRYFPTQALNFAFKDKYKQVS 510
+ Y A F K K ++
Sbjct: 72 VVAELLYLVYGAAEFVAFSKLKHLT 96
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 28.7 bits (61), Expect = 0.77
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 349 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 447
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
Score = 26.2 bits (55), Expect = 4.1
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Frame = +1
Query: 256 GGISAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFW 426
GG + S VA ++ VK Q Q + G + + I +G+ +
Sbjct: 12 GGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLY 71
Query: 427 RGNFANVIRYFPTQALNFAFKDKYK 501
RG ++ Y P+ ++ F +K K
Sbjct: 72 RGVGPMMLGYLPSWSIYFVVYEKCK 96
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 85 YEITPNLLFKNQELVFRDPPSACAATPTSTY 177
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 389 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMVATAV 282
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 373 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 465
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPAPB1A10.11c |||glutamyl-tRNA synthetase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +1
Query: 247 LPGGGISAAVSKTAVATIER--VKLLLQVQH 333
LPGGGIS +S T++ +LLL ++H
Sbjct: 487 LPGGGISDTISLLGKETVKSRLERLLLSLKH 517
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,450,820
Number of Sequences: 5004
Number of extensions: 45141
Number of successful extensions: 145
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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