Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0517
         (617 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0500 - 29538409-29539283,29540306-29541641                       29   2.2  
08_02_0337 - 15903990-15904249,15904318-15904441                       28   5.2  
03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101...    28   5.2  
06_01_0655 + 4742267-4742531,4743313-4744136                           27   9.0  

>02_05_0500 - 29538409-29539283,29540306-29541641
          Length = 736

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 390 SSVFIPLYREESVTFHPAVQGRKCNFFS 307
           +SVF+P  R ++ TF  A+ G+K   FS
Sbjct: 15  ASVFLPSARAQTTTFTSAIDGKKATTFS 42


>08_02_0337 - 15903990-15904249,15904318-15904441
          Length = 127

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 396 AESSVFIPLYREESVTFHPAVQGRKCNFFSLGSDKCHAR*CLR 268
           AE+ V  P ++  SV    + QG  CNF S G      R C+R
Sbjct: 70  AETVVVGPRWQNSSVDVAGSTQGANCNFESTGVLGMSHRGCMR 112


>03_02_1012 +
           13207907-13207990,13209196-13209280,13209402-13210186,
           13210262-13210462,13210580-13210690,13211105-13211487,
           13211594-13211702,13211786-13211866,13212088-13212156,
           13212379-13212467,13212619-13212780,13212859-13212916,
           13213143-13213373,13213516-13213662,13213779-13214333,
           13214562-13214819,13215096-13215203,13215760-13215854,
           13215946-13216102,13216466-13216666,13217542-13217670,
           13218292-13218567
          Length = 1457

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -3

Query: 525 QIPRTHIFKSIWLSFARLAFHCGFIFGQQYLTLYRRNIFSPTYAESSVF 379
           +IP+  ++K I  +       CGF++G  +  ++  NIFSP+Y   S F
Sbjct: 865 EIPKL-VYKGIVSNMEMPVRGCGFLYGS-FNRMF--NIFSPSYIHQSAF 909


>06_01_0655 + 4742267-4742531,4743313-4744136
          Length = 362

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = -3

Query: 432 TLYRRNIFSPTYAESSVFIPLYREESVTFHPAVQGRKCNFFSLGSDK 292
           T+Y  N ++    E ++  P  + ++V+F PA+   +  F +L SD+
Sbjct: 208 TMYNTNAYAYPAVEYTLQEPFVQIQNVSFVPAMNAIEDTFVNLSSDQ 254


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,775,708
Number of Sequences: 37544
Number of extensions: 311679
Number of successful extensions: 782
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)