Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0517
         (617 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2045| Best HMM Match : EGF (HMM E-Value=0)                          31   0.99 
SB_13756| Best HMM Match : Phospholip_A2_1 (HMM E-Value=2.1)           29   4.0  

>SB_2045| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1101

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 437 YCCPKMKPQWNASLAKESHIDLKICVRGIWSGNRAQTHG 553
           YC P+    +N     +S+   KIC R  W+G+  +THG
Sbjct: 368 YCIPR-DDNYNGHYTCDSNTGNKIC-RSYWTGSNCRTHG 404


>SB_13756| Best HMM Match : Phospholip_A2_1 (HMM E-Value=2.1)
          Length = 310

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 352 NFSSRCTGKKVQLFLPGF*QVPCALVSTSAL 260
           +FS R TGK+ +LF   F ++ C L+ T A+
Sbjct: 194 DFSYRFTGKESKLFCWHFMKICCVLIETQAI 224


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,377,226
Number of Sequences: 59808
Number of extensions: 354082
Number of successful extensions: 789
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)