BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0517
(617 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge... 26 0.85
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 6.0
AY645023-1|AAT92559.1| 99|Anopheles gambiae wingless protein. 23 6.0
Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein. 23 7.9
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 23 7.9
>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
dehydrogenase protein.
Length = 1325
Score = 26.2 bits (55), Expect = 0.85
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 447 GQQYLTLYRRNIFSPTYAESSVFIP 373
G + T YR+N+ P A S+FIP
Sbjct: 374 GDGFFTGYRKNVIQPHEALVSLFIP 398
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.4 bits (48), Expect = 6.0
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 267 DVDTNAHGTCQNPGRKSCTFFPVQRDEKLHFL 362
D D N GT ++ R F ++ LHFL
Sbjct: 700 DADGNGEGTEESTYRDKDESFDTPEEQVLHFL 731
>AY645023-1|AAT92559.1| 99|Anopheles gambiae wingless protein.
Length = 99
Score = 23.4 bits (48), Expect = 6.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 330 GRKCNFFSLGSDKCHAR*CLR 268
GR+CN S+G D C C R
Sbjct: 41 GRQCNDTSIGVDGCDLMCCGR 61
>Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 23.0 bits (47), Expect = 7.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 52 RLPYPRPGFAPGP 14
R+PYP P F P P
Sbjct: 28 RVPYPLPRFLPRP 40
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 23.0 bits (47), Expect = 7.9
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 371 CTGKKV*LFIPLY 333
CTG+K+ L IPLY
Sbjct: 267 CTGRKLVLGIPLY 279
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,693
Number of Sequences: 2352
Number of extensions: 13692
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -