Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0517
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54216-3|CAA90944.2|  337|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z73973-2|CAA98264.1|  277|Caenorhabditis elegans Hypothetical pr...    28   6.1  

>Z54216-3|CAA90944.2|  337|Caenorhabditis elegans Hypothetical
           protein T24H10.4 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -1

Query: 593 YRSPVSRAKTSKQYRVFALCFPTRFLGRIFLNQYGFLSLD*HSIAVSSSGNNIL-LYIDE 417
           + +P+++ ++   YR FALCF  R L  I  +Q    ++  H    S +G ++L  Y D+
Sbjct: 93  FTAPIAKIRSFSSYRPFALCF-HRILNEILHDQNDITTIYFH--VFSMNGCSLLAAYWDQ 149

Query: 416 I 414
           +
Sbjct: 150 L 150


>Z73973-2|CAA98264.1|  277|Caenorhabditis elegans Hypothetical
           protein F25D1.5 protein.
          Length = 277

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +1

Query: 235 TIAENFSA*EQT*TLTRMALVRTQGEKVALSSLYSGMKSYTFFP 366
           T   NF A  +    T+  L++T+GE V +SS+ +G ++++ +P
Sbjct: 115 TFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYP 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,764,224
Number of Sequences: 27780
Number of extensions: 281582
Number of successful extensions: 621
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)