Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0517
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   1.8  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   1.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   4.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   4.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   5.5  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 330 GRKCNFFSLGSDKCHAR*CLR 268
           GR+CN  S+G D C    C R
Sbjct: 100 GRQCNDTSIGVDGCDLMCCGR 120


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 330 GRKCNFFSLGSDKCHAR*CLR 268
           GR+CN  S+G D C    C R
Sbjct: 101 GRQCNDTSIGVDGCDLMCCGR 121


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 287 WHLSEPREKKLHFLPCTAG*KVTLSS 364
           W    P EK LH+L      K+ + S
Sbjct: 512 WPRLNPNEKSLHYLHIAGPGKIQMDS 537


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 287 WHLSEPREKKLHFLPCTAG*KVTLSS 364
           W    P EK LH+L      K+ + S
Sbjct: 512 WPRLNPNEKSLHYLHIAGPGKIQMDS 537


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 275 VYVCSHALKFSAIV 234
           V++CS A+ F AIV
Sbjct: 170 VWICSSAISFPAIV 183


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,473
Number of Sequences: 438
Number of extensions: 3774
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)