BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0513 (626 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_55463| Best HMM Match : OPA3 (HMM E-Value=0) 52 5e-07 SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06 SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013) 45 4e-05 SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20) 37 0.015 SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036 SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61) 30 1.3 SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8 SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8 SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_44623| Best HMM Match : RUN (HMM E-Value=1.6e-15) 29 4.1 SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4 SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48) 28 5.4 SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41) 26 6.1 SB_45897| Best HMM Match : Peptidase_C50 (HMM E-Value=2.7e-08) 28 7.1 SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1 SB_44857| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 SB_31695| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 SB_20279| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 >SB_55463| Best HMM Match : OPA3 (HMM E-Value=0) Length = 387 Score = 51.6 bits (118), Expect = 5e-07 Identities = 22/64 (34%), Positives = 41/64 (64%) Frame = +3 Query: 246 HVGASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 425 +V + + KL L+ WCPD ++K +M+ +++F +KK G K ++ + SE S EA++ Sbjct: 321 NVEGADRSKLVLIFWCPDNCEIKSRMVSAATFQDVKKKCPGGAKCLEIQERSELSFEALK 380 Query: 426 EKLR 437 E+L+ Sbjct: 381 EELK 384 >SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 140 Score = 48.4 bits (110), Expect = 5e-06 Identities = 21/60 (35%), Positives = 37/60 (61%) Frame = +3 Query: 258 SKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLR 437 +++ KL L+ WCPD +K KM+ +++F + K G K ++ D + S EA++EKL+ Sbjct: 78 AERSKLVLIFWCPDNCGIKNKMVSAATFKEVMKKCPGGAKCLEIQDRFDLSFEALKEKLK 137 >SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013) Length = 310 Score = 45.2 bits (102), Expect = 4e-05 Identities = 21/53 (39%), Positives = 31/53 (58%) Frame = +3 Query: 246 HVGASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSE 404 H A FL C D A +KKKML S+++ LKK G++KY +A+++ E Sbjct: 246 HRSALSDLVFFLFDRCSDEAPIKKKMLAGSTWEYLKKKFDGLKKYFEASEICE 298 >SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20) Length = 151 Score = 36.7 bits (81), Expect = 0.015 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +3 Query: 273 LFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRAT 443 L +SWC D A ++KKM +S+ D ++K + A D + + + K T Sbjct: 93 LVFISWCSDKAPIEKKMKLASTQDYVRKKFSEATTSVNANDFDDLDYDEIAAKAEKT 149 Score = 30.7 bits (66), Expect = 1.0 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%) Frame = +1 Query: 16 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGERNAEYEQ--FLED 174 SG+ V D + +K K H+Y +F I DE + V ++V E ++ F + Sbjct: 4 SGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIFYQM 63 Query: 175 LQKGGTGECRYGLFDFEY 228 ++K E RY L+D ++ Sbjct: 64 VEKLSDREPRYILYDMKF 81 >SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 150 Score = 35.5 bits (78), Expect = 0.036 Identities = 16/53 (30%), Positives = 31/53 (58%) Frame = +3 Query: 273 LFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 431 L + WC D A +KK+M+ +++ + LK V V+K Q D ++ + + + +K Sbjct: 93 LVYIFWCSDNAPIKKRMVSAATNELLKTKFV-VKKVFQINDRADLNYDDIADK 144 Score = 34.3 bits (75), Expect = 0.082 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%) Frame = +1 Query: 16 SGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGERNAEYEQ 162 SG+ + D Y+ ++ K+K H++ F I D+ K++D T E A ++Q Sbjct: 4 SGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAIFDQ 63 Query: 163 FLEDLQKGGTGECRYGLFDFEY 228 LE L E RY L+D + Sbjct: 64 MLEKL---SDSEPRYILYDLNF 82 >SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61) Length = 1226 Score = 30.3 bits (65), Expect = 1.3 Identities = 18/52 (34%), Positives = 21/52 (40%) Frame = -3 Query: 441 WRGASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTT 286 W G + R PP RS+ TS L TF ERR W P T+ Sbjct: 855 WGGTAERPPPRQSAPSRSMAITSLLCGSTF-ERRTTVLSMGVVSDWSIPATS 905 >SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 237 Score = 29.9 bits (64), Expect = 1.8 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = -1 Query: 254 SDVPWHWCVYSKSNRPYLHSPVP-PFCRS--SRNCSYSALRSP 135 S V +C YS +RPY HSPV P+C S R YS + P Sbjct: 104 SPVDRPYC-YSPVDRPYCHSPVDRPYCHSPVDRPYCYSPVDHP 145 Score = 27.5 bits (58), Expect = 9.4 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Frame = -1 Query: 254 SDVPWHWCVYSKSNRPYLHSPVP-PFCRS 171 S V +C +S +RPY HSPV P+C S Sbjct: 140 SPVDHPYC-HSPVDRPYCHSPVDRPYCHS 167 >SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 302 Score = 29.9 bits (64), Expect = 1.8 Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 9/96 (9%) Frame = +2 Query: 365 RSSEVHPSDRP-LGSVSGGRRREAPRHRSPINS-IYTRARDETEP-------ALRHSALT 517 RSS + P R LGS++ R PR RS + S +R R + P + R SA Sbjct: 183 RSSSISPGMRSSLGSIAPPPRTSTPRSRSTLRSRAGSRIRTPSTPTTTSSRASSRESARG 242 Query: 518 TRGHDTTSRLVLLQRKTNSINMIDFTGGRTSCESAR 625 TR TT + V RK+ N + T +T C + R Sbjct: 243 TRTTTTTKKCV--TRKSRGRNGSNTT--KTKCVTTR 274 >SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2480 Score = 28.7 bits (61), Expect = 4.1 Identities = 19/56 (33%), Positives = 22/56 (39%) Frame = -3 Query: 435 GASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTTTSGRAS 268 G + R PP R + TS L TF ERR W P T +G AS Sbjct: 651 GTAERLPPRQSAPSRFMAITSLLCGSTF-ERRTTVLSMGVVSDWSVPATRCAGTAS 705 >SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1690 Score = 28.7 bits (61), Expect = 4.1 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = +3 Query: 342 DALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ*TAFTHELATK 485 D LKK + +QK +L +AS E EEK + + + F H++A K Sbjct: 403 DGLKKRMEQIQK-----ELQQASSELEEEKKKTENLLSSIFPHDVANK 445 >SB_44623| Best HMM Match : RUN (HMM E-Value=1.6e-15) Length = 1277 Score = 28.7 bits (61), Expect = 4.1 Identities = 8/24 (33%), Positives = 16/24 (66%) Frame = +3 Query: 231 APVPGHVGASKKQKLFLMSWCPDT 302 +P+PG++ K +L ++ W P+T Sbjct: 498 SPIPGYLSLHKSNELLVLKWTPNT 521 >SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 733 Score = 28.3 bits (60), Expect = 5.4 Identities = 24/71 (33%), Positives = 27/71 (38%) Frame = +2 Query: 341 RRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSALTT 520 RRS + PCR S +D LG R R SP S T E AL Sbjct: 238 RRSSEAPCRQSRRSSNDARLGQFVEKRNFHGNRFVSPKKSKKTEVNREDSIEQYLEALQQ 297 Query: 521 RGHDTTSRLVL 553 +TSRL L Sbjct: 298 EA--STSRLKL 306 >SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48) Length = 643 Score = 28.3 bits (60), Expect = 5.4 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +2 Query: 146 TPNTNSSSRICRRAVPGNADMAC 214 +P T SSR C VPG+AD C Sbjct: 14 SPRTGRSSRSCSIPVPGHADHHC 36 >SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41) Length = 686 Score = 25.8 bits (54), Expect(2) = 6.1 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +2 Query: 425 REAPRHRSPINSIYTRARDETEPALRHS 508 R+AP HR+P + E+ PA +H+ Sbjct: 425 RQAPGHRTPDRHTHNNHAPESYPAAQHT 452 Score = 20.6 bits (41), Expect(2) = 6.1 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = +2 Query: 266 TEALPDVVVPGHR 304 TE PD PGHR Sbjct: 419 TEYYPDRQAPGHR 431 >SB_45897| Best HMM Match : Peptidase_C50 (HMM E-Value=2.7e-08) Length = 1907 Score = 27.9 bits (59), Expect = 7.1 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 4/73 (5%) Frame = +3 Query: 231 APVPGHVGASKKQKLFLMSWCPDTAKVKKKMLYSSSFDAL----KKSLVGVQKYIQATDL 398 AP G SKK K + CP T V K +Y F + + L+ K +A D+ Sbjct: 1253 APRTKSKGKSKKAKKDDSAECPITTAVTAKAMYGVYFAEVFVLNAEILLSRGKLTKARDV 1312 Query: 399 SEASQEAVEEKLR 437 + A + VEE R Sbjct: 1313 TAAGLDTVEEVRR 1325 >SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2722 Score = 27.9 bits (59), Expect = 7.1 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = -2 Query: 307 LAVSGHHDIRKSFCFLLAPTC-PGTGACIQSQTGHICIP 194 +A+S HD RKS C L C P + Q +CIP Sbjct: 1612 VAISNQHDDRKSTCGALPGVCGPNKISANVDQEVSLCIP 1650 >SB_44857| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 160 Score = 27.5 bits (58), Expect = 9.4 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Frame = -1 Query: 461 CCLLAIGGAELLFDGLLRRFREVGRLDVLLNSDKGLFQS---VERARVQHLLLNLGG 300 CC+L + E L + +GR D + + G F + R +HL+ +GG Sbjct: 85 CCILRMSMTEALAGATINAAASLGRADTHGSLEVGKFADMVVINAERWEHLIYQIGG 141 >SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 625 Score = 27.5 bits (58), Expect = 9.4 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = -1 Query: 467 CKCCLLAIGGAELLFDGLLRRFREVGRLDVLLNSDKGLFQS 345 C CLL G + L DGL RR G ++VLL D G +S Sbjct: 348 CIACLLFGGSRKRLPDGLTRR----GDINVLLLGDPGTAKS 384 >SB_31695| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 320 Score = 27.5 bits (58), Expect = 9.4 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +3 Query: 333 SSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ*TAFTHELATKPN 491 SSF A + L+ Y + TD E + ++ + ATD T+ H +P+ Sbjct: 244 SSFTAEIRDLIETSSYTKDTDFDEETSSLLKSQTDATDDTMTSDEHCRTQEPS 296 >SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 445 Score = 27.5 bits (58), Expect = 9.4 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = -1 Query: 233 CVYSKSNRPYLHSPVPPFCRSSRNCSYSALRS 138 CVY PY+ S +PP +S S LRS Sbjct: 292 CVYGWVALPYMSSTLPPVAYTSSGLSAGPLRS 323 >SB_20279| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1100 Score = 27.5 bits (58), Expect = 9.4 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -2 Query: 544 AASGVVAACRQGGVSESGFGFVASSCVNA 458 AA+G+V A R G+ + G+G + + C+ A Sbjct: 740 AAAGIVMAHRVVGLHQGGYGHILAECMFA 768 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,063,450 Number of Sequences: 59808 Number of extensions: 367655 Number of successful extensions: 1138 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1021 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1137 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1560464625 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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