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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0513
         (626 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)                        52   5e-07
SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)              48   5e-06
SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)            45   4e-05
SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)             37   0.015
SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.036
SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61)                  30   1.3  
SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_44623| Best HMM Match : RUN (HMM E-Value=1.6e-15)                   29   4.1  
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.4  
SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)              28   5.4  
SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41)                   26   6.1  
SB_45897| Best HMM Match : Peptidase_C50 (HMM E-Value=2.7e-08)         28   7.1  
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_44857| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_31695| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_20279| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  

>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
          Length = 387

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 22/64 (34%), Positives = 41/64 (64%)
 Frame = +3

Query: 246 HVGASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVE 425
           +V  + + KL L+ WCPD  ++K +M+ +++F  +KK   G  K ++  + SE S EA++
Sbjct: 321 NVEGADRSKLVLIFWCPDNCEIKSRMVSAATFQDVKKKCPGGAKCLEIQERSELSFEALK 380

Query: 426 EKLR 437
           E+L+
Sbjct: 381 EELK 384


>SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 140

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 21/60 (35%), Positives = 37/60 (61%)
 Frame = +3

Query: 258 SKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLR 437
           +++ KL L+ WCPD   +K KM+ +++F  + K   G  K ++  D  + S EA++EKL+
Sbjct: 78  AERSKLVLIFWCPDNCGIKNKMVSAATFKEVMKKCPGGAKCLEIQDRFDLSFEALKEKLK 137


>SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)
          Length = 310

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 21/53 (39%), Positives = 31/53 (58%)
 Frame = +3

Query: 246 HVGASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSE 404
           H  A      FL   C D A +KKKML  S+++ LKK   G++KY +A+++ E
Sbjct: 246 HRSALSDLVFFLFDRCSDEAPIKKKMLAGSTWEYLKKKFDGLKKYFEASEICE 298


>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
          Length = 151

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +3

Query: 273 LFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRAT 443
           L  +SWC D A ++KKM  +S+ D ++K        + A D  +   + +  K   T
Sbjct: 93  LVFISWCSDKAPIEKKMKLASTQDYVRKKFSEATTSVNANDFDDLDYDEIAAKAEKT 149



 Score = 30.7 bits (66), Expect = 1.0
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
 Frame = +1

Query: 16  SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGERNAEYEQ--FLED 174
           SG+ V D      + +K  K H+Y +F I DE  + V     ++V     E ++  F + 
Sbjct: 4   SGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIFYQM 63

Query: 175 LQKGGTGECRYGLFDFEY 228
           ++K    E RY L+D ++
Sbjct: 64  VEKLSDREPRYILYDMKF 81


>SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 150

 Score = 35.5 bits (78), Expect = 0.036
 Identities = 16/53 (30%), Positives = 31/53 (58%)
 Frame = +3

Query: 273 LFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 431
           L  + WC D A +KK+M+ +++ + LK   V V+K  Q  D ++ + + + +K
Sbjct: 93  LVYIFWCSDNAPIKKRMVSAATNELLKTKFV-VKKVFQINDRADLNYDDIADK 144



 Score = 34.3 bits (75), Expect = 0.082
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
 Frame = +1

Query: 16  SGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGERNAEYEQ 162
           SG+ + D     Y+ ++ K+K H++  F I D+          K++D  T  E  A ++Q
Sbjct: 4   SGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAIFDQ 63

Query: 163 FLEDLQKGGTGECRYGLFDFEY 228
            LE L      E RY L+D  +
Sbjct: 64  MLEKL---SDSEPRYILYDLNF 82


>SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61)
          Length = 1226

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = -3

Query: 441  WRGASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTT 286
            W G + R PP      RS+  TS L   TF ERR           W  P T+
Sbjct: 855  WGGTAERPPPRQSAPSRSMAITSLLCGSTF-ERRTTVLSMGVVSDWSIPATS 905


>SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 237

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 254 SDVPWHWCVYSKSNRPYLHSPVP-PFCRS--SRNCSYSALRSP 135
           S V   +C YS  +RPY HSPV  P+C S   R   YS +  P
Sbjct: 104 SPVDRPYC-YSPVDRPYCHSPVDRPYCHSPVDRPYCYSPVDHP 145



 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -1

Query: 254 SDVPWHWCVYSKSNRPYLHSPVP-PFCRS 171
           S V   +C +S  +RPY HSPV  P+C S
Sbjct: 140 SPVDHPYC-HSPVDRPYCHSPVDRPYCHS 167


>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 302

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
 Frame = +2

Query: 365 RSSEVHPSDRP-LGSVSGGRRREAPRHRSPINS-IYTRARDETEP-------ALRHSALT 517
           RSS + P  R  LGS++   R   PR RS + S   +R R  + P       + R SA  
Sbjct: 183 RSSSISPGMRSSLGSIAPPPRTSTPRSRSTLRSRAGSRIRTPSTPTTTSSRASSRESARG 242

Query: 518 TRGHDTTSRLVLLQRKTNSINMIDFTGGRTSCESAR 625
           TR   TT + V   RK+   N  + T  +T C + R
Sbjct: 243 TRTTTTTKKCV--TRKSRGRNGSNTT--KTKCVTTR 274


>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2480

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 19/56 (33%), Positives = 22/56 (39%)
 Frame = -3

Query: 435 GASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTTTSGRAS 268
           G + R PP      R +  TS L   TF ERR           W  P T  +G AS
Sbjct: 651 GTAERLPPRQSAPSRFMAITSLLCGSTF-ERRTTVLSMGVVSDWSVPATRCAGTAS 705


>SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1690

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 342 DALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ*TAFTHELATK 485
           D LKK +  +QK     +L +AS E  EEK +  +   + F H++A K
Sbjct: 403 DGLKKRMEQIQK-----ELQQASSELEEEKKKTENLLSSIFPHDVANK 445


>SB_44623| Best HMM Match : RUN (HMM E-Value=1.6e-15)
          Length = 1277

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 231 APVPGHVGASKKQKLFLMSWCPDT 302
           +P+PG++   K  +L ++ W P+T
Sbjct: 498 SPIPGYLSLHKSNELLVLKWTPNT 521


>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 733

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 24/71 (33%), Positives = 27/71 (38%)
 Frame = +2

Query: 341 RRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSALTT 520
           RRS + PCR S    +D  LG     R     R  SP  S  T    E        AL  
Sbjct: 238 RRSSEAPCRQSRRSSNDARLGQFVEKRNFHGNRFVSPKKSKKTEVNREDSIEQYLEALQQ 297

Query: 521 RGHDTTSRLVL 553
               +TSRL L
Sbjct: 298 EA--STSRLKL 306


>SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)
          Length = 643

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 146 TPNTNSSSRICRRAVPGNADMAC 214
           +P T  SSR C   VPG+AD  C
Sbjct: 14  SPRTGRSSRSCSIPVPGHADHHC 36


>SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41)
          Length = 686

 Score = 25.8 bits (54), Expect(2) = 6.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 425 REAPRHRSPINSIYTRARDETEPALRHS 508
           R+AP HR+P    +     E+ PA +H+
Sbjct: 425 RQAPGHRTPDRHTHNNHAPESYPAAQHT 452



 Score = 20.6 bits (41), Expect(2) = 6.1
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 266 TEALPDVVVPGHR 304
           TE  PD   PGHR
Sbjct: 419 TEYYPDRQAPGHR 431


>SB_45897| Best HMM Match : Peptidase_C50 (HMM E-Value=2.7e-08)
          Length = 1907

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
 Frame = +3

Query: 231  APVPGHVGASKKQKLFLMSWCPDTAKVKKKMLYSSSFDAL----KKSLVGVQKYIQATDL 398
            AP     G SKK K    + CP T  V  K +Y   F  +     + L+   K  +A D+
Sbjct: 1253 APRTKSKGKSKKAKKDDSAECPITTAVTAKAMYGVYFAEVFVLNAEILLSRGKLTKARDV 1312

Query: 399  SEASQEAVEEKLR 437
            + A  + VEE  R
Sbjct: 1313 TAAGLDTVEEVRR 1325


>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2722

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -2

Query: 307  LAVSGHHDIRKSFCFLLAPTC-PGTGACIQSQTGHICIP 194
            +A+S  HD RKS C  L   C P   +    Q   +CIP
Sbjct: 1612 VAISNQHDDRKSTCGALPGVCGPNKISANVDQEVSLCIP 1650


>SB_44857| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 160

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = -1

Query: 461 CCLLAIGGAELLFDGLLRRFREVGRLDVLLNSDKGLFQS---VERARVQHLLLNLGG 300
           CC+L +   E L    +     +GR D   + + G F     +   R +HL+  +GG
Sbjct: 85  CCILRMSMTEALAGATINAAASLGRADTHGSLEVGKFADMVVINAERWEHLIYQIGG 141


>SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 625

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -1

Query: 467 CKCCLLAIGGAELLFDGLLRRFREVGRLDVLLNSDKGLFQS 345
           C  CLL  G  + L DGL RR    G ++VLL  D G  +S
Sbjct: 348 CIACLLFGGSRKRLPDGLTRR----GDINVLLLGDPGTAKS 384


>SB_31695| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 320

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +3

Query: 333 SSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ*TAFTHELATKPN 491
           SSF A  + L+    Y + TD  E +   ++ +  ATD   T+  H    +P+
Sbjct: 244 SSFTAEIRDLIETSSYTKDTDFDEETSSLLKSQTDATDDTMTSDEHCRTQEPS 296


>SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 445

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 233 CVYSKSNRPYLHSPVPPFCRSSRNCSYSALRS 138
           CVY     PY+ S +PP   +S   S   LRS
Sbjct: 292 CVYGWVALPYMSSTLPPVAYTSSGLSAGPLRS 323


>SB_20279| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1100

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 544 AASGVVAACRQGGVSESGFGFVASSCVNA 458
           AA+G+V A R  G+ + G+G + + C+ A
Sbjct: 740 AAAGIVMAHRVVGLHQGGYGHILAECMFA 768


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,063,450
Number of Sequences: 59808
Number of extensions: 367655
Number of successful extensions: 1138
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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