Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0513
(626 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4) id... 63 2e-10
At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4) id... 63 2e-10
At4g00680.1 68417.m00093 actin-depolymerizing factor, putative s... 62 2e-10
At1g01750.1 68414.m00094 actin-depolymerizing factor, putative s... 62 4e-10
At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1) id... 61 7e-10
At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6) id... 61 7e-10
At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3) id... 59 2e-09
At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3) id... 59 2e-09
At3g46000.1 68416.m04977 actin-depolymerizing factor, putative (... 59 2e-09
At5g52360.1 68418.m06497 actin-depolymerizing factor, putative s... 59 3e-09
At4g25590.1 68417.m03687 actin-depolymerizing factor, putative s... 58 4e-09
At3g45990.1 68416.m04976 actin-depolymerizing factor, putative s... 57 8e-09
At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5) id... 53 1e-07
At4g34970.1 68417.m04957 actin-depolymerizing factor, putative s... 51 5e-07
At3g03290.1 68416.m00326 universal stress protein (USP) family p... 31 0.47
At1g71460.1 68414.m08257 pentatricopeptide (PPR) repeat-containi... 29 2.5
At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator... 28 4.4
At5g63320.1 68418.m07946 expressed protein 28 5.8
At5g62100.2 68418.m07795 BAG domain-containing protein similar t... 28 5.8
At5g62100.1 68418.m07794 BAG domain-containing protein similar t... 28 5.8
At1g76180.1 68414.m08846 dehydrin (ERD14) identical to SP|P42763... 28 5.8
At5g28810.1 68418.m03542 hypothetical protein 27 7.7
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 27 7.7
At3g43920.1 68416.m04701 ribonuclease III family protein similar... 27 7.7
At2g23190.1 68415.m02770 cytochrome P450, putative Similar to C... 27 7.7
>At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 132
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +3
Query: 261 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 434
+K K+F ++WCPD AKV+ KM+Y+SS D K+ L G+Q +QATD +E + ++ ++
Sbjct: 74 QKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRV 131
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 22 VTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGTGE 198
+ V D CK + E+K + HR++V+ I + +KQ+ VE VGE YE F L E
Sbjct: 1 MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP---ADE 57
Query: 199 CRYGLFDFEY--THQCQ 243
CRY ++DF++ CQ
Sbjct: 58 CRYAIYDFDFVTAENCQ 74
>At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4)
identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}
Length = 139
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +3
Query: 261 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 434
+K K+F ++WCPD AKV+ KM+Y+SS D K+ L G+Q +QATD +E + ++ ++
Sbjct: 81 QKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRV 138
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +1
Query: 13 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 189
ASG+ V D CK + E+K + HR++V+ I + +KQ+ VE VGE YE F L
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP--- 61
Query: 190 TGECRYGLFDFEY--THQCQ 243
ECRY ++DF++ CQ
Sbjct: 62 ADECRYAIYDFDFVTAENCQ 81
>At4g00680.1 68417.m00093 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 62.5 bits (145), Expect = 2e-10
Identities = 26/58 (44%), Positives = 42/58 (72%)
Frame = +3
Query: 261 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 434
+K K+F ++W PDT++V+ KMLY+SS D K+ + G+Q +QATD SE S + ++ +L
Sbjct: 81 QKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGRL 138
Score = 57.2 bits (132), Expect = 8e-09
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Frame = +1
Query: 13 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDLQKG 186
ASG+ V+D CK + E+K + +R++VF I DEK Q+ +E +G Y+ F +
Sbjct: 5 ASGMHVNDECKIKFLELKAKRTYRFIVFKI-DEKAQQVQIEKLGNPEETYDDFTSSIP-- 61
Query: 187 GTGECRYGLFDFEYTHQ--CQ 243
ECRY ++DF++T + CQ
Sbjct: 62 -DDECRYAVYDFDFTTEDNCQ 81
>At1g01750.1 68414.m00094 actin-depolymerizing factor, putative
strong similarity to SP|P30175 Actin-depolymerizing
factor (ADF) {Lilium longiflorum}; contains Pfam profile
PF00241: Cofilin/tropomyosin-type actin-binding protein
Length = 140
Score = 61.7 bits (143), Expect = 4e-10
Identities = 26/58 (44%), Positives = 42/58 (72%)
Frame = +3
Query: 261 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 434
+K K+F ++W PDT++V+ KMLY+SS D K+ L G+Q +QATD SE S + ++ ++
Sbjct: 81 QKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRV 138
Score = 57.2 bits (132), Expect = 8e-09
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Frame = +1
Query: 13 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDLQKG 186
ASG+ VSD CK + E+K + +R++VF I DEK Q+ ++ +G YE F + +
Sbjct: 5 ASGMHVSDECKLKFLELKAKRNYRFIVFKI-DEKAQQVMIDKLGNPEETYEDFTRSIPE- 62
Query: 187 GTGECRYGLFDFEYT--HQCQ 243
ECRY ++D+++T CQ
Sbjct: 63 --DECRYAVYDYDFTTPENCQ 81
>At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1)
identical to SP|Q39250 Actin-depolymerizing factor 1
(ADF-1) (AtADF1) {Arabidopsis thaliana}
Length = 139
Score = 60.9 bits (141), Expect = 7e-10
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +3
Query: 261 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSE 404
+K K+F ++WCPD AKV+ KM+Y+SS D K+ L G+Q +QATD +E
Sbjct: 81 QKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTE 128
Score = 60.5 bits (140), Expect = 9e-10
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Frame = +1
Query: 13 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 189
ASG+ V D CK + E+K + HR++V+ I + +KQ+ VE VG+ YE+F L
Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP--- 61
Query: 190 TGECRYGLFDFEY--THQCQ 243
ECRY ++DF++ CQ
Sbjct: 62 ADECRYAIYDFDFVTAENCQ 81
>At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6)
identical to SP|Q9ZSK2 Actin-depolymerizing factor 6
(ADF-6) (AtADF6) {Arabidopsis thaliana}
Length = 146
Score = 60.9 bits (141), Expect = 7e-10
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +1
Query: 16 SGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQKGGT 192
SG+ V+D KTT+ E+++ K HRYVVF I +K++ VE G Y+ FL L
Sbjct: 13 SGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLP---D 69
Query: 193 GECRYGLFDFEY--THQCQ 243
+CRY ++DF++ + CQ
Sbjct: 70 NDCRYAVYDFDFVTSENCQ 88
Score = 54.0 bits (124), Expect = 8e-08
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +3
Query: 261 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 431
+K K+F +W P T+ ++ K+LYS+S D L + L G+ IQATD +E E + E+
Sbjct: 88 QKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRER 144
>At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 124
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 13 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 189
ASG+ V D CK + E+K + HR++++ I + +KQ+ VE +GE +E L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP--- 61
Query: 190 TGECRYGLFDFEY 228
ECRY +FDF++
Sbjct: 62 ADECRYAIFDFDF 74
>At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3)
identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
(ADF 3) (AtADF3) {Arabidopsis thaliana}
Length = 139
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 13 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 189
ASG+ V D CK + E+K + HR++++ I + +KQ+ VE +GE +E L
Sbjct: 5 ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP--- 61
Query: 190 TGECRYGLFDFEY 228
ECRY +FDF++
Sbjct: 62 ADECRYAIFDFDF 74
Score = 55.6 bits (128), Expect = 3e-08
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +3
Query: 264 KQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 431
+ ++F ++W PDTA+V+ KM+Y+SS D K+ L G+Q +QATD +E + + +
Sbjct: 82 RSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFKSR 137
>At3g46000.1 68416.m04977 actin-depolymerizing factor, putative
(ADF2) strong similarity to SP|Q9ZSK3
Actin-depolymerizing factor 4 (ADF-4) (AtADF4)
{Arabidopsis thaliana}; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/57 (43%), Positives = 39/57 (68%)
Frame = +3
Query: 261 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 431
+K K+F ++W PDTAKV+ KM+Y+SS D K+ L G+Q +QATD +E + + +
Sbjct: 79 QKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSR 135
Score = 54.4 bits (125), Expect = 6e-08
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 13 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGT 192
ASG+ V D CK + E+K + R +V+ I D KQ+ VE +GE Y+ F L
Sbjct: 5 ASGMAVHDDCKLKFMELKAKRTFRTIVYKIED-KQVIVEKLGEPEQSYDDFAASLP---A 60
Query: 193 GECRYGLFDFEY--THQCQ 243
+CRY ++DF++ CQ
Sbjct: 61 DDCRYCIYDFDFVTAENCQ 79
>At5g52360.1 68418.m06497 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 137
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +3
Query: 261 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 431
+K K+F ++W PD+++V+ KM+Y+SS D K+ L G+Q +QATD SE S + ++ +
Sbjct: 79 QKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSLDIIKSR 135
Score = 57.6 bits (133), Expect = 6e-09
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +1
Query: 13 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGT 192
ASG+ V D CK + E+K + +R+++F I D +Q+ VE +G Y+ F L
Sbjct: 5 ASGMAVEDECKLKFLELKAKRNYRFIIFRI-DGQQVVVEKLGSPQENYDDFTNYLP---P 60
Query: 193 GECRYGLFDFEYT 231
ECRY ++DF++T
Sbjct: 61 NECRYAVYDFDFT 73
>At4g25590.1 68417.m03687 actin-depolymerizing factor, putative
strong similarity to pollen specific
actin-depolymerizing factor 2 [Nicotiana tabacum]
GI:22857914; contains Pfam profile PF00241:
Cofilin/tropomyosin-type actin-binding protein
Length = 130
Score = 58.4 bits (135), Expect = 4e-09
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +3
Query: 261 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 431
+K K+F ++W PD+++V+ KM+Y+SS D K+ L G+Q +QATD SE S + ++ +
Sbjct: 72 QKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSR 128
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +1
Query: 22 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 201
+ V D CK + E+K + +R+++F I D +Q+ VE +G + Y+ F L EC
Sbjct: 1 MAVEDECKLKFLELKSKRNYRFIIFRI-DGQQVVVEKLGNPDETYDDFTASLP---ANEC 56
Query: 202 RYGLFDFEY 228
RY +FDF++
Sbjct: 57 RYAVFDFDF 65
>At3g45990.1 68416.m04976 actin-depolymerizing factor, putative
similar to SP|Q9ZSK3 Actin-depolymerizing factor 4
(ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 133
Score = 57.2 bits (132), Expect = 8e-09
Identities = 23/57 (40%), Positives = 40/57 (70%)
Frame = +3
Query: 264 KQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 434
++K+ ++W P TAK++KKM+YSS+ D K+ L G+Q ATDL++ S +A+ ++
Sbjct: 76 ERKICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRRI 132
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Frame = +1
Query: 22 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVE------TVGERNAEYEQFLEDLQK 183
+ + D CK T+ E+K+ + R +V+ I D Q+ VE GER YE+F L
Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKIEDNMQVIVEKHHYKKMHGEREQSYEEFANSLP- 59
Query: 184 GGTGECRYGLFDFEY 228
ECRY + D E+
Sbjct: 60 --ADECRYAILDIEF 72
>At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5)
identical to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}
Length = 143
Score = 53.2 bits (122), Expect = 1e-07
Identities = 19/59 (32%), Positives = 41/59 (69%)
Frame = +3
Query: 261 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLR 437
+K K+F ++W P+ +K++ K+LY++S D L++ L G+ +QATD +E + ++++ +
Sbjct: 85 RKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDRAK 143
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +1
Query: 7 KMAS-GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQ 180
KMA+ G+ V+D C +++ ++K K HRY+VF I ++ +++ V+ VG Y + L
Sbjct: 6 KMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLP 65
Query: 181 KGGTGECRYGLFDFEY 228
+CRY +FDF++
Sbjct: 66 ---VDDCRYAVFDFDF 78
>At4g34970.1 68417.m04957 actin-depolymerizing factor, putative
similar to SP|Q9ZNT3 Actin-depolymerizing factor 5
(ADF-5) (AtADF5) {Arabidopsis thaliana}; contains Pfam
profile PF00241: Cofilin/tropomyosin-type actin-binding
protein
Length = 130
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +1
Query: 28 VSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGECR 204
++D CK ++ E+K K HRYVV+ + ++ +++ V+ VG Y+ L + +CR
Sbjct: 1 MTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPE---DDCR 57
Query: 205 YGLFDFEY 228
Y +FDF+Y
Sbjct: 58 YAVFDFDY 65
Score = 48.8 bits (111), Expect = 3e-06
Identities = 17/59 (28%), Positives = 40/59 (67%)
Frame = +3
Query: 261 KKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLR 437
+ K+F ++W P+ +++++KM+Y++S L++ L GV +QATD +E + ++++ +
Sbjct: 72 RMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDRAK 130
>At3g03290.1 68416.m00326 universal stress protein (USP) family
protein contains Pfam profile: PF00582 universal stress
protein family
Length = 274
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 127 ETVGERNAEYEQFLEDLQKGGTGE 198
ET G+ +EYE+F E+ ++GG GE
Sbjct: 45 ETDGDSTSEYEEFEEEKERGGEGE 68
>At1g71460.1 68414.m08257 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 689
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -2
Query: 520 CRQGGVSESGFGFVASSCVNAVYWRSVARSFSSTAS*DASERSVAWM 380
C+ G ++ F S NA+ W ++ +++ D + RS+ WM
Sbjct: 363 CKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWM 409
>At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator of
chromosome condensation (RCC1) family protein identical
to zinc finger protein PRAF1 [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.
Length = 1103
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -2
Query: 532 VVAACRQGGVSESGFGFVASSCVNAVYWRSVARSFSSTAS*DASERSVAWMYF*TP 365
V AC Q G+ ++GF F + + S+ S SS A D + + +W +P
Sbjct: 911 VKLACLQNGLDQNGFHFPEENGFHPSRSESMTSSISSVAPFDFAFANASWSNLQSP 966
>At5g63320.1 68418.m07946 expressed protein
Length = 569
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 296 GHRQG*EEDVVL*LVRRSEKVPCRSSEVHPSDRPLGSVSGGRR--REAPRHRSPINSIYT 469
G ++ E +VV + +E V EVHP DR G R RE PR S+
Sbjct: 311 GDKEEQETEVVDMRKQENEVVDMGVEEVHPLDRSEGRTLSPHRKEREDPRASGNEESVSE 370
Query: 470 RARD 481
+A+D
Sbjct: 371 KAQD 374
>At5g62100.2 68418.m07795 BAG domain-containing protein similar to
BAG domain containing proteins (At5g07220, At5g52060)
Length = 285
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 369 VQKYIQATDL---SEASQEAVEEKLRATDRQ*TAFTHELATKPNPLSDTPP 512
+ KY++A DL + Q + K + +R+ F E + KP S +PP
Sbjct: 199 LHKYVEALDLLKIKNSRQPQTKPKPQYKEREMLTFYEEASRKPTASSSSPP 249
>At5g62100.1 68418.m07794 BAG domain-containing protein similar to
BAG domain containing proteins (At5g07220, At5g52060)
Length = 296
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 369 VQKYIQATDL---SEASQEAVEEKLRATDRQ*TAFTHELATKPNPLSDTPP 512
+ KY++A DL + Q + K + +R+ F E + KP S +PP
Sbjct: 210 LHKYVEALDLLKIKNSRQPQTKPKPQYKEREMLTFYEEASRKPTASSSSPP 260
>At1g76180.1 68414.m08846 dehydrin (ERD14) identical to SP|P42763
Dehydrin ERD14 {Arabidopsis thaliana}
Length = 185
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 353 KVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRA--RDETEPALRHSALTTRG 526
KV S +DR L G ++ E +PI S + + E EP ++H +L +
Sbjct: 15 KVATEESSAEVTDRGLFDFLGKKKDETKPEETPIASEFEQKVHISEPEPEVKHESLLEKL 74
Query: 527 HDTTS 541
H + S
Sbjct: 75 HRSDS 79
>At5g28810.1 68418.m03542 hypothetical protein
Length = 560
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 508 GVSES-GFGFVASSCVNAVYWRSVARSFSSTA 416
G+ E+ GFG +CV + WRS + F+ TA
Sbjct: 185 GIGEACGFGKTTLTCVPLLDWRSSRKRFNFTA 216
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 374 EVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSALTTRGH 529
++ P P+ + +G R P + + NS + + R P SA+TT GH
Sbjct: 62 QLRPPSIPVTTNTGHRHCRPPSNPATTNSGHHQLRPPPPPPPPLSAITTTGH 113
>At3g43920.1 68416.m04701 ribonuclease III family protein similar to
RNA helicase/RNAseIII CAF protein [Arabidopsis thaliana]
GI:6102610; contains Pfam profiles PF02170: PAZ domain,
PF00636: RNase3 domain
Length = 1531
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -1
Query: 437 AELLFDGLLRRFREVGRLDVLLNSDKGL--FQ---SVERARVQHLLLNLG 303
+ L FD LRR +E+G+ D LN D +Q S++ + H L NLG
Sbjct: 224 SHLKFDASLRRLQELGK-DSFLNMDNKFETYQKRLSIDYREILHCLDNLG 272
>At2g23190.1 68415.m02770 cytochrome P450, putative Similar to
Cytochrome P450 91A1 (SP:Q9FG65) [Arabidopsis thaliana];
Length = 543
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 410 RRFREVGRLDVLLNSDKGLFQSVERARVQHLLLNL 306
R R +G L++ + F SV + ++HLLL L
Sbjct: 171 RNLRRIGTLEIFSSHKLNGFLSVRKDEIRHLLLRL 205
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,367,813
Number of Sequences: 28952
Number of extensions: 238081
Number of successful extensions: 922
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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