Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0511
         (669 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21321-6|AAG00046.1|  206|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AC006774-5|AAF60618.1|  363|Caenorhabditis elegans Hypothetical ...    28   6.9  

>U21321-6|AAG00046.1|  206|Caenorhabditis elegans Hypothetical
           protein ZK177.3 protein.
          Length = 206

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 21/68 (30%), Positives = 26/68 (38%)
 Frame = -2

Query: 356 KSRNSLPITVFHYKSRHIFFRKKQGPLADHK*NRSGIFLNKNHHGVHIDANDKHMADIRT 177
           KSRN+L + V HY   HI    KQ  L   K  +    L K     H     +     + 
Sbjct: 78  KSRNNLMVHVHHYHPTHI-NEMKQANLESAKEEKMKTMLEKQAKEAHEFEISQPAVFEKD 136

Query: 176 VLHYDQPM 153
              YD PM
Sbjct: 137 FASYDLPM 144


>AC006774-5|AAF60618.1|  363|Caenorhabditis elegans Hypothetical
           protein Y46H3A.4 protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 472 TRYQFFFFFWNWLHYYRLLVRP 537
           T+Y+ F  F +W  YY LL  P
Sbjct: 233 TKYENFLVFLSWCFYYLLLTHP 254


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,096,002
Number of Sequences: 27780
Number of extensions: 285568
Number of successful extensions: 527
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)