Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0510
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   5.4  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   5.4  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 245 QALKTNINMECVWSMRECDGDERSHG 322
           Q +K+N+ +  VWS  +   DE  +G
Sbjct: 71  QIMKSNVWLRLVWSDYQLQWDEADYG 96


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 527 WDARKRNPVASFDSSYPVTSV 589
           W + + +PV+ +DSS  ++SV
Sbjct: 555 WSSPQASPVSGYDSSTSISSV 575


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 468  GARRGPELLVSASEITP*NYGMQGKG 545
            GARR P L+ ++S  TP + G +  G
Sbjct: 1123 GARRAPALIKASSTNTPKSAGRRSGG 1148


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 821,431
Number of Sequences: 2352
Number of extensions: 18129
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)