Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0510
(718 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 130 7e-31
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 66 2e-11
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 64 9e-11
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 60 2e-09
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 58 4e-09
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 58 8e-09
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 57 1e-08
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 56 2e-08
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 56 2e-08
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 56 3e-08
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 41 4e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 52 5e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 51 7e-07
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 51 9e-07
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 51 9e-07
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 51 9e-07
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 51 9e-07
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 50 1e-06
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 50 2e-06
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 50 2e-06
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 50 2e-06
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 49 4e-06
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 49 4e-06
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 48 5e-06
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 48 5e-06
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 48 5e-06
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 48 6e-06
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 48 6e-06
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 48 6e-06
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 48 6e-06
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 48 6e-06
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 48 6e-06
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 48 6e-06
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 47 1e-05
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 47 1e-05
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 47 1e-05
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 47 1e-05
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 46 2e-05
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 46 3e-05
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 46 3e-05
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 46 3e-05
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 45 4e-05
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 45 4e-05
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 45 6e-05
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 45 6e-05
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 45 6e-05
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 45 6e-05
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 44 8e-05
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 44 1e-04
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 44 1e-04
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 43 2e-04
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 43 2e-04
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 43 2e-04
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 42 3e-04
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 42 3e-04
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 42 3e-04
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 42 3e-04
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 42 3e-04
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 42 3e-04
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 42 3e-04
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 42 3e-04
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 42 3e-04
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 42 3e-04
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 42 4e-04
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 42 4e-04
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 42 5e-04
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 41 7e-04
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 41 7e-04
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 41 7e-04
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 41 7e-04
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 41 7e-04
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 41 7e-04
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 41 7e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 41 0.001
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 41 0.001
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 41 0.001
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 41 0.001
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 41 0.001
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 41 0.001
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 40 0.001
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 40 0.002
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 40 0.002
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 40 0.002
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 40 0.002
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 40 0.002
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 39 0.003
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 39 0.003
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 39 0.003
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 39 0.003
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 39 0.004
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 39 0.004
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 39 0.004
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 39 0.004
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 38 0.005
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 38 0.005
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 38 0.005
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 38 0.005
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 38 0.005
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 38 0.007
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 38 0.007
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 38 0.007
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 38 0.009
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 38 0.009
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 38 0.009
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 38 0.009
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 37 0.012
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 37 0.012
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 37 0.012
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 37 0.012
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 37 0.015
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 37 0.015
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 37 0.015
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 37 0.015
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 37 0.015
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 36 0.020
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 36 0.020
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 36 0.020
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 36 0.020
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 36 0.020
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 36 0.027
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.027
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 36 0.027
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 36 0.027
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 36 0.027
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 36 0.027
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 36 0.027
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 36 0.035
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 36 0.035
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 36 0.035
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 36 0.035
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 35 0.047
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 35 0.062
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 35 0.062
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 35 0.062
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 35 0.062
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 35 0.062
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 35 0.062
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 35 0.062
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 34 0.082
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 34 0.082
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 34 0.082
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 34 0.082
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 34 0.082
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 34 0.082
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 34 0.11
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 34 0.11
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 34 0.11
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 34 0.11
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 34 0.11
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 34 0.11
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 33 0.14
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 33 0.14
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.19
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 33 0.19
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 33 0.19
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 33 0.19
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 33 0.19
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 33 0.19
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.25
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 33 0.25
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 33 0.25
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 33 0.25
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 33 0.25
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 33 0.25
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 33 0.25
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 33 0.25
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 32 0.33
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 32 0.44
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 32 0.44
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.44
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 32 0.44
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 32 0.44
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 31 0.58
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 31 0.76
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 31 0.76
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 31 0.76
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 31 0.76
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 31 0.76
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 31 0.76
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 31 1.0
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 31 1.0
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 30 1.3
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 30 1.3
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 30 1.3
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 30 1.8
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 30 1.8
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 30 1.8
At5g22590.1 68418.m02638 hypothetical protein 30 1.8
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 30 1.8
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 29 2.3
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 29 2.3
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 29 2.3
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 29 2.3
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 29 2.3
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 29 3.1
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 29 3.1
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 29 3.1
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 29 3.1
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 29 3.1
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 29 3.1
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 29 3.1
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 29 3.1
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 29 3.1
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 29 3.1
At1g03380.1 68414.m00317 expressed protein 29 3.1
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 29 4.1
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 4.1
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 29 4.1
At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repe... 29 4.1
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 28 5.4
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 28 5.4
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 28 5.4
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 28 5.4
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 28 5.4
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 28 7.1
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 28 7.1
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 28 7.1
At4g27620.2 68417.m03970 expressed protein 28 7.1
At4g27620.1 68417.m03969 expressed protein 28 7.1
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 28 7.1
At5g09820.1 68418.m01136 plastid-lipid associated protein PAP / ... 27 9.4
At5g05570.1 68418.m00605 transducin family protein / WD-40 repea... 27 9.4
At5g04800.2 68418.m00499 40S ribosomal protein S17 (RPS17D) 40S ... 27 9.4
At5g04800.1 68418.m00498 40S ribosomal protein S17 (RPS17D) 40S ... 27 9.4
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 27 9.4
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 27 9.4
At3g10610.1 68416.m01276 40S ribosomal protein S17 (RPS17C) simi... 27 9.4
At2g43500.1 68415.m05405 RWP-RK domain-containing protein low si... 27 9.4
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 27 9.4
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 27 9.4
At2g05220.1 68415.m00550 40S ribosomal protein S17 (RPS17B) 27 9.4
At2g04390.1 68415.m00442 40S ribosomal protein S17 (RPS17A) 27 9.4
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 27 9.4
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 130 bits (315), Expect = 7e-31
Identities = 63/156 (40%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
R+I +W V+G C+N MV+KGH AI+ L ++ DGS + + + D TV WDV TG +IKK+
Sbjct: 75 REIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKM 134
Query: 435 KGHANFVNSVSGARRGPELLVSASEI-TP*NYGMQGKG-IQLHRLTVHIQSQVYSSMIQL 608
H++FVNS RRGP L++S S+ T + M+ +G IQ I + +S
Sbjct: 135 AEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAAD- 193
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
K + GVDN +K+WD+R + ++ ++GH DT+TG+
Sbjct: 194 -KIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGM 228
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVSGA 473
+M++ GH A+ + F+P G+ + +G+ D + +W V + LKGH N + +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWT 105
Query: 474 RRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKK----FLSSGVDNV 641
G +++ ++ + T + ++ G Q+ ++ H S +S ++ +S D
Sbjct: 106 SDGSQIVSASPDKTVRAWDVE-TGKQIKKMAEH--SSFVNSCCPTRRGPPLIISGSDDGT 162
Query: 642 IKMWDIR 662
K+WD+R
Sbjct: 163 AKLWDMR 169
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV----PTGTRIK 428
+ +W++ + E M ++GH I + SPDGS+L T DN + VWD+ P +K
Sbjct: 204 VKVWDLR-KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVK 262
Query: 429 KLKGHA-NFVNSVSGARRGPE 488
+GH NF ++ P+
Sbjct: 263 IFEGHQHNFEKNLLKCSWSPD 283
Score = 44.4 bits (100), Expect = 8e-05
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
Frame = +3
Query: 327 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 506
I + FS ++TG DN V VWD+ G L+GH + + +S + G LL +
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 507 -------EITP*NYGMQGKGIQL---HRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWD 656
++ P Y Q + +++ H+ S K + D ++ +WD
Sbjct: 243 DNKLCVWDMRP--YAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWD 300
Query: 657 IRNNQISLKIKGHTDTV 707
+ + K+ GHT +V
Sbjct: 301 TTSRRTIYKLPGHTGSV 317
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 145 RTSNLYAPIMLLEGHQGEIFTGKFHPEGKHLASAGFE 255
RTS+L APIMLL GH ++T KF+P G +AS +
Sbjct: 38 RTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHD 74
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 327 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVN 458
+++ +SPDG+ + G++D V +WD + I KL GH VN
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVN 318
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 172 MLLEGHQGEIFTGKFHPEGKHLASAGFEDK 261
M LEGHQ I P+G +L + G ++K
Sbjct: 216 MTLEGHQDTITGMSLSPDGSYLLTNGMDNK 245
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 491
GH A++ + FSPDG L +G+ D TV +WD+ T T + KGH N+V +V+ + G L
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHL 166
Query: 492 L--VSASEI---TP*NYGMQGKGIQLHRLTV-HIQSQVYSSMIQLKKFLSSGVDNVIKMW 653
+ + EI P ++G + H+ + I + ++F++S D ++W
Sbjct: 167 VSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIW 226
Query: 654 DIRNNQISLKIKGHTDTVT 710
DI + + + GHT VT
Sbjct: 227 DITLKKSIICLSGHTLAVT 245
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/67 (32%), Positives = 45/67 (67%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
IW++ + ++++ + GHT A+ + + DG +YTG+ D T+ +W+ G I++LKGH
Sbjct: 225 IWDITLK-KSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHG 282
Query: 447 NFVNSVS 467
+++NS++
Sbjct: 283 HWINSLA 289
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 RQILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
+ + +WN + GQ V V +GH G + Q+ +S D L +G+ D+T+ +W++ T +
Sbjct: 382 KSVRLWNGITGQF--VTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQD 439
Query: 432 LKGHANFVNSVSGARRGPELL 494
L GHA+ V +V + G +++
Sbjct: 440 LPGHADEVFAVDWSPDGEKVV 460
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG-TRIKKLK 437
+ +W++Y + + KGH ++ + +SPDG HL +G+ + W+ G L
Sbjct: 133 VRLWDLYTETP-LFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLT 191
Query: 438 GHANFVNSVS 467
GH ++ +S
Sbjct: 192 GHKKWITGIS 201
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 485
+ GH + + FSPDG + + + D +V +W+ TG + +GH V VS +
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 486 ELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSS--MIQLKKFLSSGVDNVIKMW 653
LL + + T + ++ K ++ L H +V++ +K +S G D V+K+W
Sbjct: 416 LLLSGSKDSTLKIWEIRTKKLK-QDLPGH-ADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +3
Query: 363 LYTGATDNTVAVWDVPTGTRIKK-LKGHANFVNSVSGARRGPELLVSASEITP*NY-GMQ 536
L +G+ D T+ +W+ + KK L GH VN V + G + ++ + + + G+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 537 GKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
G+ + + R V QV S + LS D+ +K+W+IR ++ + GH D V
Sbjct: 392 GQFVTVFRGHVGPVYQV-SWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEV 447
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 166 PIMLLEGHQGEIFTGKFHPEGKHLAS 243
P+ +GH+ + T + P+GKHL S
Sbjct: 143 PLFTCKGHKNWVLTVAWSPDGKHLVS 168
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 64.1 bits (149), Expect = 9e-11
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 2/141 (1%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 470
+N V++GH G + + F P TG+ D T+ +WDV TG L GH V ++
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 471 ARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQ--LKKFLSSGVDNVI 644
+ R + + + + ++ + + H+ S VY + L L+ G D+V
Sbjct: 227 SNRHTYMFSAGDDKQVKCWDLEQNKV-IRSYHGHL-SGVYCLALHPTLDVLLTGGRDSVC 284
Query: 645 KMWDIRNNQISLKIKGHTDTV 707
++WDIR + GH +TV
Sbjct: 285 RVWDIRTKMQIFALSGHDNTV 305
Score = 46.0 bits (104), Expect = 3e-05
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
+Q+ W++ Q + + GH + L P L TG D+ VWD+ T +I L
Sbjct: 240 KQVKCWDLE-QNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFAL 298
Query: 435 KGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKK 614
GH N V SV P+++ + + T + ++ G + LT H +S V + + K+
Sbjct: 299 SGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLR-YGKTMSTLTHHKKS-VRAMTLHPKE 356
Query: 615 --FLSSGVDNVIK 647
F S+ DN K
Sbjct: 357 NAFASASADNTKK 369
Score = 34.7 bits (76), Expect = 0.062
Identities = 32/156 (20%), Positives = 64/156 (41%), Gaps = 2/156 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
R I IW+V + + GH + L S +++++ D V WD+ I+
Sbjct: 198 RTIKIWDVATGVLK-LTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSY 256
Query: 435 KGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQS--QVYSSMIQL 608
GH + V ++ LL + + ++ K +Q+ L+ H + V++
Sbjct: 257 HGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTK-MQIFALSGHDNTVCSVFTRPTD- 314
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
+ ++ D IK WD+R + + H +V +
Sbjct: 315 PQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAM 350
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 615 FLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
F + D IK+WD+ + L + GH + V GL
Sbjct: 191 FCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGL 224
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 59.7 bits (138), Expect = 2e-09
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Frame = +3
Query: 261 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ IW+V G+C + V+ H+ + + F+ DGS + + + D +WD TG +K L
Sbjct: 137 VRIWDVTTGKC--LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 438 GHANF-VNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQV-YSSMIQL- 608
N V+ V + G +LV + T + + L T H+ +Q SS +
Sbjct: 195 DDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF-LKTYTGHVNAQYCISSAFSVT 253
Query: 609 --KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
K+ +S DN + MW++ + ++ K++GHT+TV
Sbjct: 254 NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETV 288
Score = 52.4 bits (120), Expect = 3e-07
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 476
+ + GHT + F+P + + +G+ D TV +WDV TG +K L H++ V +V R
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165
Query: 477 RGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQV-YSSMIQLKKFLSSG-VDNVIKM 650
G L+VS+S G G + L V + KF+ G +DN +++
Sbjct: 166 DG-SLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRL 224
Query: 651 WDIRNNQISLKIKGHTD 701
W+I + + GH +
Sbjct: 225 WNISSAKFLKTYTGHVN 241
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
E V GH I + FS D + + + D T+ +WDV TG+ IK L GH N+ V+
Sbjct: 62 EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVN 120
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/108 (21%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN---FVNSVSGARRGPELLVSASEI 512
FSP+G + G DNT+ +W++ + +K GH N ++S G ++ + +
Sbjct: 206 FSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDN 265
Query: 513 TP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSG-VDNVIKMW 653
+ + K + L +L H ++ + + + ++SG +D +++W
Sbjct: 266 CVHMWELNSKKL-LQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 6/143 (4%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-----PTGTRIKKLKGHANFVNSVSG 470
+ H A+ + FS DG L + + D T+ + + P +++ GH N ++ V+
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 471 ARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSG-VDNVIK 647
+ +VSAS+ G + L H + + SG D ++
Sbjct: 80 SSDA-RFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 648 MWDIRNNQISLKIKGHTDTVTGL 716
+WD+ + + H+D VT +
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAV 161
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 401
++GHT +M + P + + +G+ D TV +W
Sbjct: 281 LEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 RQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
R I +W+++ G C N ++ + AI C S DG +++G D + +WD+ TG + +
Sbjct: 338 RTIKLWDLHKGYCTNTVLFTSNCNAI---CLSIDGLTVFSGHMDGNLRLWDIQTGKLLSE 394
Query: 432 LKGHANFVNSVSGARRGPELLVSASE 509
+ GH++ V SVS +R G +L S +
Sbjct: 395 VAGHSSAVTSVSLSRNGNRILTSGRD 420
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/135 (22%), Positives = 56/135 (41%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 491
G G I+ + + D + + N + VWDV +G L GH + V +V ++
Sbjct: 271 GSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRH 330
Query: 492 LVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDIRNNQ 671
+VSA+ KG + + I S +D +++WDI+ +
Sbjct: 331 VVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGK 390
Query: 672 ISLKIKGHTDTVTGL 716
+ ++ GH+ VT +
Sbjct: 391 LLSEVAGHSSAVTSV 405
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 494
H G + F + L+TG D V +WD +GT IK L G + ++ ++
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVI 289
Query: 495 VSASEITP*NYGMQGKGIQLHRLTVHIQS--QVYSSMIQLKKFLSSGVDNVIKMWDI 659
+ S + + ++ H LT H V S + +S+ D IK+WD+
Sbjct: 290 AATSSNNLFVWDVSSGRVR-HTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDL 345
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 339 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
C SPD ++ G+ D +V VW + G + LK
Sbjct: 452 CISPDDDYVAAGSADGSVHVWSLSKGNIVSILK 484
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/80 (33%), Positives = 48/80 (60%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
IW+ E + V++GHT + + F+P + + +G+ D T+ +W+V TG ++ +K H+
Sbjct: 111 IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Query: 447 NFVNSVSGARRGPELLVSAS 506
++SV R G L+VSAS
Sbjct: 171 MPISSVHFNRDG-SLIVSAS 189
Score = 56.8 bits (131), Expect = 1e-08
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Frame = +3
Query: 261 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL- 434
I IW V G+C V ++K H+ I + F+ DGS + + + D + +WD GT +K L
Sbjct: 152 IRIWEVKTGKC--VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLI 209
Query: 435 KGHANFVNSVSGARRGPELLVSA--SEITP*NYGMQGKGIQL---HRLTVHIQSQVYSSM 599
+ V+ + G +LV+ S + NY GK +++ H V + + S+
Sbjct: 210 DDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYA-TGKFLKVYTGHTNKVFCITSAF-SV 267
Query: 600 IQLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
K +S DN + +WD++ I +++GHTD V
Sbjct: 268 TNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAV 303
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/148 (19%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Frame = +3
Query: 276 VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFV 455
+Y ++ ++GHT AI + FS DG+ L + + D T+ +W + I + +GH++ +
Sbjct: 29 IYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGI 88
Query: 456 NSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSG-V 632
+ ++ + ++ + T + + L L H + + SG
Sbjct: 89 SDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSF 148
Query: 633 DNVIKMWDIRNNQISLKIKGHTDTVTGL 716
D I++W+++ + IK H+ ++ +
Sbjct: 149 DETIRIWEVKTGKCVRMIKAHSMPISSV 176
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +3
Query: 279 YGQCENVMVMKGHTGAIMQL--CFS-PDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN 449
Y + + V GHT + + FS +G ++ +G+ DN V +WD+ +++L+GH +
Sbjct: 242 YATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTD 301
Query: 450 FVNSVS 467
V SVS
Sbjct: 302 AVISVS 307
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 56.8 bits (131), Expect = 1e-08
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 470
+N V++GH G + + F P TG+ D T+ +WDV TG L GH V ++
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Query: 471 ARRGPELLVSASEITP*NYGM-QGKGIQLHRLTVHIQSQVYSSMIQ--LKKFLSSGVDNV 641
+ R + + + + + Q K I+ + +H VY + L L+ G D+V
Sbjct: 221 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLH---GVYCLALHPTLDVVLTGGRDSV 277
Query: 642 IKMWDIR 662
++WDIR
Sbjct: 278 CRVWDIR 284
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
R I IW+V + + GH G + L S +++++ D V WD+ I+
Sbjct: 192 RTIKIWDVATGVLK-LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSY 250
Query: 435 KGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLK- 611
GH + V ++ +L + + ++ K +Q+ L H S V+S + +
Sbjct: 251 HGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTK-MQIFVLP-H-DSDVFSVLARPTD 307
Query: 612 -KFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
+ ++ D+ IK WD+R + I H TV +
Sbjct: 308 PQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAM 343
Score = 35.1 bits (77), Expect = 0.047
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
+Q+ W++ Q + + GH + L P + TG D+ VWD+ T +I L
Sbjct: 234 KQVKCWDLE-QNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVL 292
Query: 435 KGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKK 614
H + V SV P+++ + + T + ++ G + +T H + V + + K+
Sbjct: 293 P-HDSDVFSVLARPTDPQVITGSHDSTIKFWDLR-YGKSMATITNH-KKTVRAMALHPKE 349
Query: 615 --FLSSGVDNVIK 647
F+S+ DN+ K
Sbjct: 350 NDFVSASADNIKK 362
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 615 FLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
F + D IK+WD+ + L + GH V GL
Sbjct: 185 FCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGL 218
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +3
Query: 399 WDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQ 578
W P + L+GH +V SV+ +++ T + + G+ LT HI
Sbjct: 156 WHAPW-KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDV-ATGVLKLTLTGHI- 212
Query: 579 SQVYSSMIQLKK--FLSSGVDNVIKMWDIRNNQISLKIKGH 695
QV + + S+G D +K WD+ N++ GH
Sbjct: 213 GQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGH 253
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 RQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
+ + +W+V G+C + + GH ++ L SPDG ++ +G D T+ +WD+ T I
Sbjct: 521 KTVRLWDVQTGECVRIFI--GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITP 578
Query: 432 LKGHANFVNSVSGARRGPELLVSAS 506
L GH + V S+S + G LL S S
Sbjct: 579 LMGHNSCVWSLSYSGEG-SLLASGS 602
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/78 (29%), Positives = 44/78 (56%)
Frame = +3
Query: 234 FGFCRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 413
F C R IW++ + + + +M GH + + + P+ +++ TG++D TV +WDV T
Sbjct: 475 FASCSHDRTARIWSM-DRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQT 530
Query: 414 GTRIKKLKGHANFVNSVS 467
G ++ GH + V S++
Sbjct: 531 GECVRIFIGHRSMVLSLA 548
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK- 437
I++W++ + + GH + L +S +GS L +G+ D TV +WDV + T++ K +
Sbjct: 565 IMMWDL-STARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEE 623
Query: 438 --GHANFVNSV 464
G++N + S+
Sbjct: 624 KNGNSNRLRSL 634
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
Frame = +3
Query: 294 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 473
N++ KGH + FSP G + + + D T +W + RI+ L+ A ++ V
Sbjct: 452 NLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSM---DRIQPLRIMAGHLSDVDWH 508
Query: 474 RRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYS-SMIQLKKFLSSG-VDNVIK 647
+ +S+ T + +Q + R+ + +S V S +M ++++SG D I
Sbjct: 509 PNCNYIATGSSDKTVRLWDVQTG--ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIM 566
Query: 648 MWDIRNNQISLKIKGHTDTVTGL 716
MWD+ + + GH V L
Sbjct: 567 MWDLSTARCITPLMGHNSCVWSL 589
Score = 37.5 bits (83), Expect = 0.009
Identities = 29/138 (21%), Positives = 51/138 (36%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 482
++ GH+G + FSP G + + + D T+ +W + KGH V + G
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 483 PELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDIR 662
+ + T + M IQ R+ S V + D +++WD++
Sbjct: 473 HYFASCSHDRTARIWSMD--RIQPLRIMAGHLSDV-DWHPNCNYIATGSSDKTVRLWDVQ 529
Query: 663 NNQISLKIKGHTDTVTGL 716
+ GH V L
Sbjct: 530 TGECVRIFIGHRSMVLSL 547
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 56.0 bits (129), Expect = 2e-08
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 485
+KGHTG + + S D + +G+ D +V VWD T +++LKGH + V+ V G
Sbjct: 895 LKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVK-MLSGE 951
Query: 486 ELLVSASEITP*NYGMQGK--GIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDI 659
+L +A + T + ++ + R + I S Y + ++G D V +WDI
Sbjct: 952 RVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGI--LAAAGRDTVANIWDI 1009
Query: 660 RNNQISLKIKGHTDTVTGL 716
R+ + K+KGHT + +
Sbjct: 1010 RSGKQMHKLKGHTKWIRSI 1028
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Frame = +3
Query: 267 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLK 437
+W+V G C+ V+ H G + + +SP + TG+ D + W+ G +K +
Sbjct: 1046 VWSVSRGSCDAVLAC--HAGPVQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNIT 1103
Query: 438 GHANFVNSVSGARRGPELLVSASEIT----P*NYGMQGKGIQLHRLTVHIQSQV--YSSM 599
H++ + S++ + + + ++ P N G + G QL+R+ + V +S
Sbjct: 1104 LHSSSILSINAGENWLGIGAADNSMSLFHRPSNAGTKVSGWQLYRVPQRTAAVVRCVASD 1163
Query: 600 IQLKKFLSSGVDNVIKMWDIRNN 668
++ K+ S G + V+++WD N
Sbjct: 1164 LERKRICSGGRNGVLRLWDATIN 1186
Score = 44.4 bits (100), Expect = 8e-05
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Frame = +3
Query: 294 NVMVMKGHTGAIMQL--------CF----SPDGSHLYTGATDNTVAVWDVP-TGTRIK-K 431
NV V+KGH GA+ L C D +G+TD V +WD G+ ++
Sbjct: 835 NVRVLKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSELRAT 894
Query: 432 LKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLK 611
LKGH V ++S R +++ + +++ + Q + L L H M+ +
Sbjct: 895 LKGHTGTVRAISSDR--GKIVSGSDDLSVIVWDKQTTQL-LEELKGHDSQVSCVKMLSGE 951
Query: 612 KFLSSGVDNVIKMWDIRNN 668
+ L++ D +KMWD+R +
Sbjct: 952 RVLTAAHDGTVKMWDVRTD 970
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Frame = +3
Query: 318 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 497
+ AI+ L + L D +WD+ +G ++ KLKGH ++ S+ R + L+
Sbjct: 980 SSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSI---RMVEDTLI 1036
Query: 498 SASEITP*NYGMQGKGIQLHRLTVH---IQSQVYSSMIQLKKFLSSGVDNVIKMWD 656
+ S+ +G L H +QS YS K ++ D +++ W+
Sbjct: 1037 TGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFD--KGIITGSADGLLRFWE 1090
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 615 FLSSGVDNVIKMWD--IRNNQISLKIKGHTDTVTGL 716
F+S D ++K+WD +R +++ +KGHT TV +
Sbjct: 870 FISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI 905
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
VM ++GHT ++ L +SPD S L +G+ DNTV +W++ TG L+GH + V V+
Sbjct: 111 VMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVT 167
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 267 IWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 443
IWN+ G C V+ +GH + + + P GS + + + D TV +W + GH
Sbjct: 144 IWNMRTGMCTTVL--RGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTG-AIMQLCFSPDGSHLYTGATDNTVAV 398
R I +W G + V K G +++ L +SPDG L+ + D TVA+
Sbjct: 307 RTITVWTT-GSARPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGTVAM 354
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +3
Query: 621 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
S +DN + +W++R + ++GH V G+
Sbjct: 135 SGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGV 166
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 41.1 bits (92), Expect(2) = 4e-07
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 491
GH + + + P S L +G D V +WD +G + L GH N V SV + G L
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 492 LVSASE 509
L ++ +
Sbjct: 326 LTASKD 331
Score = 30.3 bits (65), Expect(2) = 4e-07
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 618 LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
L++ D +IK++DIR + +GHT VT L
Sbjct: 326 LTASKDQIIKLYDIRTMKELQSFRGHTKDVTSL 358
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 618 LSSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
+S G D ++K+WD R+ + + GH + V
Sbjct: 284 VSGGKDQLVKLWDTRSGRELCSLHGHKNIV 313
Score = 27.5 bits (58), Expect = 9.4
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 1/112 (0%)
Frame = +3
Query: 324 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 503
+I ++ ++P G L TG+ +W+ + L+ H + S+ + +VS
Sbjct: 125 SINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWS-HNENYMVSG 183
Query: 504 SEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLK-KFLSSGVDNVIKMWD 656
+ Y T H +S S + KF S D +K+WD
Sbjct: 184 DDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD 235
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 51.6 bits (118), Expect = 5e-07
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Frame = +3
Query: 294 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 473
+++V +GH + + FSP+G HL +G DN +WD+ + + HAN V+ V
Sbjct: 415 SILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYE 474
Query: 474 RRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGV--DNVIK 647
+ L +AS N G+ L + +S+V S I + V D IK
Sbjct: 475 PQEGYFLATASYDMKVNI-WSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIK 533
Query: 648 MWDIRNN 668
+W N
Sbjct: 534 LWTSSGN 540
Score = 47.6 bits (108), Expect = 8e-06
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Frame = +3
Query: 243 CRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR 422
C L +W + + V+K H + FSP L T + D T +W GT
Sbjct: 273 CSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKT-DGTL 331
Query: 423 IKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMI 602
++ +GH + + V+ G L ++ + T + + G +L H +S VY
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDI-NTGAELLLQEGHSRS-VYGIAF 389
Query: 603 QLKKFL--SSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
Q L S G+D++ ++WD+R + L +GH V
Sbjct: 390 QQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPV 426
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
R +W G + +GH + ++ F P G +L T + D T +WD+ TG +
Sbjct: 320 RTAKLWKTDGTL--LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQ 377
Query: 435 KGHANFVNSVSGARRGPELLVSASEITP*NYGMQ-GKGIQLHRLTVHIQSQVYSSMIQLK 611
+GH+ V ++ + G + + ++ G+ I + + HI+ V+S
Sbjct: 378 EGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQ--GHIK-PVFSVNFSPN 434
Query: 612 KF--LSSGVDNVIKMWDIRNNQISLKIKGHTDTVT 710
+ S G DN ++WD+R + I H + V+
Sbjct: 435 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVS 469
Score = 31.9 bits (69), Expect = 0.44
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSVSGARRGPELLVSASEITP 518
FS DG L T + +W++P T I LK H V + L ++++ T
Sbjct: 263 FSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTA 322
Query: 519 *NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFL-SSGVDNVIKMWDIRNNQISLKIKGH 695
+ G +Q H+ + K+L ++ D ++WDI L +GH
Sbjct: 323 KLWKTDGTLLQTFE--GHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGH 380
Query: 696 TDTVTGL 716
+ +V G+
Sbjct: 381 SRSVYGI 387
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 169 IMLLEGHQGEIFTGKFHPEGKHLASAGFEDK 261
I++ +GH +F+ F P G HLAS G +++
Sbjct: 416 ILVFQGHIKPVFSVNFSPNGYHLASGGEDNQ 446
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +1
Query: 34 ETKRKAEDVSLVPSKRVRHEISVVGTREKAVVTSSVPRTSNLYAP----IMLLEGHQGEI 201
E + ++++ + R V + + T+S RT+ L+ + EGH +
Sbjct: 283 EMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRL 342
Query: 202 FTGKFHPEGKHLASAGFE 255
FHP GK+L + ++
Sbjct: 343 ARVAFHPSGKYLGTTSYD 360
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 51.2 bits (117), Expect = 7e-07
Identities = 35/154 (22%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
++ +W + G+ ++M + GHT A+ + F + GA+ + +WDV ++
Sbjct: 39 KVNLWAI-GKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFT 97
Query: 438 GHANFVNSVSGARRGPELLVSASEITP*NYGMQGKG-IQLHRLTVHIQSQVYSSMIQLKK 614
GH + ++V G L +S+ + ++ KG IQ ++ S + + +
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTP-DGRW 156
Query: 615 FLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
+S G+DNV+K+WD+ ++ + K H + L
Sbjct: 157 VVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSL 190
Score = 37.9 bits (84), Expect = 0.007
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 2/130 (1%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 491
H+ + L S L+ TG D V +W + T + L GH + V+SV+ +
Sbjct: 14 HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLV 73
Query: 492 LVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSG-VDNVIKMWDIRNN 668
L AS + ++ + + T H + +FL+SG D +K+WDIR
Sbjct: 74 LAGASSGVIKLWDVE-EAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKK 132
Query: 669 QISLKIKGHT 698
KGH+
Sbjct: 133 GCIQTYKGHS 142
Score = 34.3 bits (75), Expect = 0.082
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
K H G I L F P L TG+ D TV WD+ T I + A V S+
Sbjct: 181 KFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSI 232
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 50.8 bits (116), Expect = 9e-07
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGA--IMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRI 425
++I +W++ G+ + + GH + +++ CF D S + +G+ D+ V +W++ +
Sbjct: 419 QEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPL 478
Query: 426 KKLKGHANFVNSVSGARRGPELLVSASE 509
+ L GH+ VN VS + P +L SAS+
Sbjct: 479 EVLSGHSMTVNCVSWNPKNPRMLASASD 506
Score = 35.9 bits (79), Expect = 0.027
Identities = 34/156 (21%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKG-HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
R I++W+ G + +G ++ L +PDG + T +D + + ++ T ++++
Sbjct: 337 RGIVMWDTDGN--EIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLET--KVER 392
Query: 432 LKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQ--VYSSMIQ 605
+ + S+S + G +V+ S + + G+ Q + + H QS+ + S
Sbjct: 393 VISEEQPITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGG 452
Query: 606 L-KKFLSSGV-DNVIKMWDIRNNQISLKIKGHTDTV 707
L F++SG D+ + +W+++N + + GH+ TV
Sbjct: 453 LDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTV 488
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 264 LIWNVY--GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+IW V + E ++ H + + +SPD + L T + +WDV TG ++
Sbjct: 249 IIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGV-LRHTF 307
Query: 438 GHANFVNSVSGARRGPE 488
G+ N +VS P+
Sbjct: 308 GNNNTGFTVSSCAWFPD 324
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 50.8 bits (116), Expect = 9e-07
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGA--IMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRI 425
++I +WN+ G + V KGH + I++ CF + + +G+ D+ V +W TG I
Sbjct: 465 QEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLI 524
Query: 426 KKLKGHANFVNSVSGARRGPELLVSASE 509
+L GHA VN VS + +L SAS+
Sbjct: 525 VELPGHAGAVNCVSWSPTNLHMLASASD 552
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNS 461
+ +++ HT + L FS +G +L + + D T +W++ I L GH V +
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 462 VSGARRGPELLVSASE 509
+ + ++L +E
Sbjct: 325 ILWSPDDRQVLTCGAE 340
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDN-TVAVW 401
Q+ IW+ + ++ + GH GA+ + +SP H+ A+D+ T+ +W
Sbjct: 512 QVYIWH-RSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 264 LIWNVY--GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 416
+IW + G + GH ++ + +SPD + T + + WDV +G
Sbjct: 299 IIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSG 351
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 270 WNV-YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
W+V G C + M KG I + PDG + G TD ++ +WD+
Sbjct: 346 WDVDSGDCVH-MYEKGGISPI-SCGWYPDGQGIIAGMTDRSICMWDL 390
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 50.8 bits (116), Expect = 9e-07
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ +W+V + + V MK H + + +S D + L +G+ D +V +W + G I +K
Sbjct: 558 VQVWDV-ARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 616
Query: 438 GHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKF 617
AN + G L +++ Y ++ + L + H ++ Y +
Sbjct: 617 TKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTL 676
Query: 618 LSSGVDNVIKMWDIRNNQISLKIKGHTDT 704
+SS DN +K+WD +S+ I G +T
Sbjct: 677 VSSSTDNTLKLWD-----LSMSISGINET 700
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 621 SSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
SS + V+++WD+ NQ+ ++K H V
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRV 579
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 50.8 bits (116), Expect = 9e-07
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ +W+V + + V MK H + + +S D + L +G+ D +V +W + G I +K
Sbjct: 558 VQVWDV-ARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 616
Query: 438 GHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKF 617
AN + G L +++ Y ++ + L + H ++ Y +
Sbjct: 617 TKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTL 676
Query: 618 LSSGVDNVIKMWDIRNNQISLKIKGHTDT 704
+SS DN +K+WD +S+ I G +T
Sbjct: 677 VSSSTDNTLKLWD-----LSMSISGINET 700
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 621 SSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
SS + V+++WD+ NQ+ ++K H V
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRV 579
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/109 (26%), Positives = 52/109 (47%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
+W++ N+++ +GH ++ + FSP+G HL +G DN +WD+ + + H
Sbjct: 156 VWDLR-TARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHV 214
Query: 447 NFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYS 593
N V+ V + L +AS N G+ L + V +S+V S
Sbjct: 215 NLVSQVKYEPQERYFLATASHDMNVNI-WSGRDFSLVKSLVGHESKVAS 262
Score = 36.3 bits (80), Expect = 0.020
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 3/151 (1%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 443
+W V ++V+KGH + + FS D L T +TD T +W GT ++ K
Sbjct: 89 LWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKT-DGTLLQTFKAS 147
Query: 444 ANF--VNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKF 617
+ F + V R +L+ QG Q+ L+V Y
Sbjct: 148 SGFDSLARVWDLRTARNILI-----------FQGHIKQV--LSVDFSPNGY-------HL 187
Query: 618 LSSGVDNVIKMWDIRNNQISLKIKGHTDTVT 710
S G DN ++WD+R ++ I H + V+
Sbjct: 188 ASGGEDNQCRIWDLRMRKLLYIIPAHVNLVS 218
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 169 IMLLEGHQGEIFTGKFHPEGKHLASAGFEDK 261
I++ +GH ++ + F P G HLAS G +++
Sbjct: 165 ILIFQGHIKQVLSVDFSPNGYHLASGGEDNQ 195
Score = 28.3 bits (60), Expect = 5.4
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +3
Query: 381 DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHR 560
D+ VWD+ T I +GH V SV + G L + + ++ + + L+
Sbjct: 151 DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKL-LYI 209
Query: 561 LTVHIQ--SQVYSSMIQLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
+ H+ SQV + ++ D + +W R+ + + GH V L
Sbjct: 210 IPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASL 263
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKL 434
Q IW++ + + + ++ H + Q+ + P + L T + D V +W + +K L
Sbjct: 195 QCRIWDLRMR-KLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSL 253
Query: 435 KGHANFVNSV 464
GH + V S+
Sbjct: 254 VGHESKVASL 263
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
++ +W + G+ ++ + GH+ I + F + GA T+ +WD+ ++ L
Sbjct: 133 KVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLT 191
Query: 438 GHANFVNSVSGARRGPELLVSASEITP*N-YGMQGKGIQLHRLTVHIQS-QVYSSMIQLK 611
GH + SV+ G E S S T + ++ KG +H H + V +
Sbjct: 192 GHRSNCVSVNFHPFG-EFFASGSLDTNLKIWDIRKKGC-IHTYKGHTRGVNVLRFTPDGR 249
Query: 612 KFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
+S G DNV+K+WD+ ++ + K H + L
Sbjct: 250 WIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSL 284
Score = 44.8 bits (101), Expect = 6e-05
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
I +W++ + + V + GH + + F P G +G+ D + +WD+ I KG
Sbjct: 176 IKLWDLE-EAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 234
Query: 441 HANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFL 620
H VN + G +VS E G LH H + ++ S +FL
Sbjct: 235 HTRGVNVLRFTPDG-RWIVSGGEDNVVKVWDLTAGKLLHEFKSH-EGKIQSLDFHPHEFL 292
Query: 621 --SSGVDNVIKMWDIRNNQI 674
+ D +K WD+ ++
Sbjct: 293 LATGSADKTVKFWDLETFEL 312
Score = 43.6 bits (98), Expect = 1e-04
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 491
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ +
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 167
Query: 492 LVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSG-VDNVIKMWDIRNN 668
A+ T + ++ + + LT H + V + +F +SG +D +K+WDIR
Sbjct: 168 AAGAASGTIKLWDLEEAKV-VRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKK 226
Query: 669 QISLKIKGHTDTVTGL 716
KGHT V L
Sbjct: 227 GCIHTYKGHTRGVNVL 242
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
R + IW+V + E+V GH + LCF S LY+G+ D TV VW+V I +
Sbjct: 244 RHVHIWDVRTR-EHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITEN 302
Query: 435 KGHANFVNSVSGARRGPELLV 497
GH + ++ R+ L V
Sbjct: 303 HGHQGEILAIDALRKERALTV 323
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 488
K H+ + L S DG +L TG D V +WDV T ++ GH N V+ + R G
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLC-FRYGTS 277
Query: 489 LLVSAS 506
L S S
Sbjct: 278 ELYSGS 283
Score = 28.7 bits (61), Expect = 4.1
Identities = 29/138 (21%), Positives = 52/138 (37%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 482
V+ H +++ + S D S ++ + D T+ WDV +G K + + S R
Sbjct: 156 VIVKHRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLRE 215
Query: 483 PELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDIR 662
P + K L + + S + + GVD + +WD+R
Sbjct: 216 P----------------RNKNHSRESLALAVSSDG-------RYLATGGVDRHVHIWDVR 252
Query: 663 NNQISLKIKGHTDTVTGL 716
+ GH +TV+ L
Sbjct: 253 TREHVQAFPGHRNTVSCL 270
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 49.6 bits (113), Expect = 2e-06
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 6/143 (4%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
RQI +W++ + + KGH G +M + G L T D V VWDV G
Sbjct: 82 RQIRVWDLE-TLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYF 140
Query: 435 KGHANFVNSV-SGARRGPELLVSAS-EITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
+GH V+S+ +L+S S + T + + K + L + + + I L
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIAL 200
Query: 609 KK----FLSSGVDNVIKMWDIRN 665
+ S+G D V+ +WD+ +
Sbjct: 201 SEDGLTLFSAGRDKVVNLWDLHD 223
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 482
V+ H I + + + S + TG+ D T ++W +P + LKGH + SV +
Sbjct: 494 VVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVD 553
Query: 483 PELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMI-QLKKFLSSGVDNVIKMWDI 659
++ ++ + T + + G L H S + +S I +F+S G D ++K+W++
Sbjct: 554 QCVMTASGDKTVKIWAI-SDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNV 612
Query: 660 RNNQISLKIKGHTDTVTGL 716
++ H D V L
Sbjct: 613 NTSECIATYDQHEDKVWAL 631
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 485
++G + + L SPD L++ + VWD+ T I+ KGH V ++ G
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGG 115
Query: 486 ELLVSASEITP*NYGMQGKGIQLHRLTVH--IQSQVYSSMIQLKKFLSSGVDN-VIKMWD 656
L + ++ + + G G H H + S + K L SG D+ +++WD
Sbjct: 116 LLATAGADRKVLVWDVDG-GFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWD 174
Query: 657 I 659
+
Sbjct: 175 L 175
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
R IW + +V+ +KGH I + FS + T + D TV +W + G+ +K
Sbjct: 521 RTASIWRL-PDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTF 579
Query: 435 KGHANFVNSVSGARRGPELL 494
+GH + V S G + +
Sbjct: 580 EGHTSSVLRASFITDGTQFV 599
Score = 34.7 bits (76), Expect = 0.062
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 303 VMKGHTGAIMQL--CFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 473
V+ GH ++ L C S G+ L TG+ D TV +W+ + + I GH + +V+ A
Sbjct: 396 VLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFA 455
Query: 474 RRGPELLVSAS 506
++ VS S
Sbjct: 456 KKSFSFFVSGS 466
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 48.8 bits (111), Expect = 4e-06
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
++ +W + G+ ++ + GH+ I + F + GA T+ +WD+ ++ L
Sbjct: 40 KVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLT 98
Query: 438 GHANFVNSVSGARRGPELLVSASEITP*N-YGMQGKGIQLHRLTVHIQS-QVYSSMIQLK 611
GH + SV G E S S T + ++ KG +H H + V +
Sbjct: 99 GHRSNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKGC-IHTYKGHTRGVNVLRFTPDGR 156
Query: 612 KFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
+S G DN++K+WD+ ++ + K H + L
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSL 191
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 491
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 492 LVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSG-VDNVIKMWDIRNN 668
A+ T + ++ I + LT H + + +F +SG +D +K+WDIR
Sbjct: 75 AAGAASGTIKLWDLEEAKI-VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
Query: 669 QISLKIKGHTDTVTGL 716
KGHT V L
Sbjct: 134 GCIHTYKGHTRGVNVL 149
Score = 41.5 bits (93), Expect = 5e-04
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 2/140 (1%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
I +W++ + + V + GH + + F P G +G+ D + +WD+ I KG
Sbjct: 83 IKLWDLE-EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141
Query: 441 HANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFL 620
H VN + G +VS E G L H + Q+ S +FL
Sbjct: 142 HTRGVNVLRFTPDG-RWVVSGGEDNIVKVWDLTAGKLLTEFKSH-EGQIQSLDFHPHEFL 199
Query: 621 --SSGVDNVIKMWDIRNNQI 674
+ D +K WD+ ++
Sbjct: 200 LATGSADRTVKFWDLETFEL 219
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 48.8 bits (111), Expect = 4e-06
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 2/155 (1%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
++ +W + G+ ++ + GH+ I + F + GA T+ +WD+ ++ L
Sbjct: 40 KVNLWAI-GKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLT 98
Query: 438 GHANFVNSVSGARRGPELLVSASEITP*N-YGMQGKGIQLHRLTVHIQS-QVYSSMIQLK 611
GH + SV G E S S T + ++ KG +H H + V +
Sbjct: 99 GHRSNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKGC-IHTYKGHTRGVNVLRFTPDGR 156
Query: 612 KFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
+S G DN++K+WD+ ++ + K H + L
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSL 191
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSH-LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 491
H+ A+ L S L TG D+ V +W + I L GH++ ++SV+ +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 492 LVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSG-VDNVIKMWDIRNN 668
A+ T + ++ I + LT H + + +F +SG +D +K+WDIR
Sbjct: 75 AAGAASGTIKLWDLEEAKI-VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 133
Query: 669 QISLKIKGHTDTVTGL 716
KGHT V L
Sbjct: 134 GCIHTYKGHTRGVNVL 149
Score = 41.5 bits (93), Expect = 5e-04
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 2/140 (1%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
I +W++ + + V + GH + + F P G +G+ D + +WD+ I KG
Sbjct: 83 IKLWDLE-EAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG 141
Query: 441 HANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFL 620
H VN + G +VS E G L H + Q+ S +FL
Sbjct: 142 HTRGVNVLRFTPDG-RWVVSGGEDNIVKVWDLTAGKLLTEFKSH-EGQIQSLDFHPHEFL 199
Query: 621 --SSGVDNVIKMWDIRNNQI 674
+ D +K WD+ ++
Sbjct: 200 LATGSADRTVKFWDLETFEL 219
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/156 (19%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMV----MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR 422
+ I++W + + ++ V M GH+ + + S DG +G+ D + +WD+ TG
Sbjct: 38 KSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGES 97
Query: 423 IKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGK-GIQLHRLTVH---IQSQVY 590
++ GH V SV+ + +++ ++ + T + G+ + H + +
Sbjct: 98 TRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRF 157
Query: 591 SSMIQLKKFLSSGVDNVIKMWDIRNNQISLKIKGHT 698
S + +S+ D +K+W+++N ++ + GH+
Sbjct: 158 SPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHS 193
Score = 44.8 bits (101), Expect = 6e-05
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Frame = +3
Query: 255 RQILIWNVYGQCE-NVMVMKGHTGAIMQLCFSPDG--SHLYTGATDNTVAVWDVPTGTRI 425
R I +WN G+C+ + GH + + FSP+ + + + D TV VW++
Sbjct: 127 RTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 426 KKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQ 605
L GH+ ++N+V+ + G L S + +G +L+ L S ++S
Sbjct: 187 NTLAGHSGYLNTVAVSPDG-SLCASGGKDGVILLWDLAEGKKLYSL--EAGSIIHSLCFS 243
Query: 606 LKKF-LSSGVDNVIKMWDIRNNQISLKIK 689
++ L + +N I++WD+ + + +K
Sbjct: 244 PNRYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 543 GIQLHRLTVH---IQSQVYSSMIQLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
G+ R+T H +Q V SS Q LS D +++WD+ + + + GHT V
Sbjct: 53 GVAQRRMTGHSHFVQDVVLSSDGQFA--LSGSWDGELRLWDLATGESTRRFVGHTKDV 108
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 336 LCFSPDGSHLYTGATDNTVAVWDV 407
L +S DG+ L++G TD + VW +
Sbjct: 300 LNWSADGNTLFSGYTDGVIRVWGI 323
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
+ KGHT I + FSPDG + +G DN V VWD+ G + + K H + S+
Sbjct: 84 IQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSL 139
Score = 47.6 bits (108), Expect = 8e-06
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +3
Query: 300 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 479
M + GHT + + F+ + + GA+ + +WD+ ++ GH + ++V
Sbjct: 1 MSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF 60
Query: 480 GPELLVSASEITP*NYGMQGKG-IQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWD 656
G L +S+ + + KG IQ ++ S + S + +S G+DNV+K+WD
Sbjct: 61 GEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSP-DGRWVVSGGLDNVVKVWD 119
Query: 657 IRNNQISLKIKGHTDTVTGL 716
+ ++ + K H + L
Sbjct: 120 LTAGKLLHEFKCHEGPIRSL 139
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
I +W++ + + V GH + F P G L +G++D + VWD I+ KG
Sbjct: 31 IKLWDLE-ESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKG 89
Query: 441 HANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFL 620
H ++++ + G ++ + + + G LH H + + S +FL
Sbjct: 90 HTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTA-GKLLHEFKCH-EGPIRSLDFHPLEFL 147
Query: 621 --SSGVDNVIKMWDIRNNQI 674
+ D +K WD+ ++
Sbjct: 148 LATGSADRTVKFWDLETFEL 167
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
K H G I L F P L TG+ D TV WD+ T I + A V +++
Sbjct: 130 KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIA 182
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 416
++ IW+VY + + GH A+ +CFS DGS T D + WD TG
Sbjct: 306 KVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETG 358
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 48.0 bits (109), Expect = 6e-06
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Frame = +3
Query: 255 RQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIK 428
+++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++
Sbjct: 530 KKVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLR 587
Query: 429 KLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
+ GHA V S+ + ELL S + R +QV +
Sbjct: 588 TISGHAAPVMSIDFHPKKTELLCSCDSNN--DIRFWDINASCVRAVKGASTQV-RFQPRT 644
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKI-KGHTDTV 707
+FL++ +N + ++DI NN + I KGH+ V
Sbjct: 645 GQFLAAASENTVSIFDIENNNKRVNIFKGHSSNV 678
Score = 45.6 bits (103), Expect = 3e-05
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Frame = +3
Query: 243 CRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT- 419
C I W++ C V +KG A Q+ F P A++NTV+++D+
Sbjct: 612 CDSNNDIRFWDINASC--VRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNK 666
Query: 420 RIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSM 599
R+ KGH++ V+SV + G EL+ S SE + + G +H L+ + ++ +S +
Sbjct: 667 RVNIFKGHSSNVHSVCWSPNG-ELVASVSEDAVKLWSL-SSGDCIHELS-NSGNKFHSVV 723
Query: 600 I--QLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
L G I++W+ N+ + + GH ++ L
Sbjct: 724 FHPSYPDLLVIGGYQAIELWNTMENK-CMTVAGHECVISAL 763
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRIKK 431
+ I IW+ + + GH +M + F P + L ++N + WD+ + ++
Sbjct: 572 KTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRA 630
Query: 432 LKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLK 611
+KG + V R + L +ASE T + ++ +++ H S V+S
Sbjct: 631 VKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH-SSNVHSVCWSPN 686
Query: 612 -KFLSSGVDNVIKMWDI 659
+ ++S ++ +K+W +
Sbjct: 687 GELVASVSEDAVKLWSL 703
Score = 31.1 bits (67), Expect = 0.76
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP* 521
FS DG L + D V +W++ T + HA+ + V +L S+ + T
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 575
Query: 522 NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKK---FLSSGVDNVIKMWDIRNNQISLKIKG 692
+ G L ++ H + V S KK S +N I+ WDI N +KG
Sbjct: 576 IWDASDPGYFLRTISGH-AAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 633
Query: 693 HTDTV 707
+ V
Sbjct: 634 ASTQV 638
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.0 bits (109), Expect = 6e-06
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Frame = +3
Query: 255 RQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIK 428
+++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++
Sbjct: 532 KKVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLR 589
Query: 429 KLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
+ GHA V S+ + ELL S + R +QV +
Sbjct: 590 TISGHAAPVMSIDFHPKKTELLCSCDSNN--DIRFWDINASCVRAVKGASTQV-RFQPRT 646
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKI-KGHTDTV 707
+FL++ +N + ++DI NN + I KGH+ V
Sbjct: 647 GQFLAAASENTVSIFDIENNNKRVNIFKGHSSNV 680
Score = 45.6 bits (103), Expect = 3e-05
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Frame = +3
Query: 243 CRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT- 419
C I W++ C V +KG A Q+ F P A++NTV+++D+
Sbjct: 614 CDSNNDIRFWDINASC--VRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNK 668
Query: 420 RIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSM 599
R+ KGH++ V+SV + G EL+ S SE + + G +H L+ + ++ +S +
Sbjct: 669 RVNIFKGHSSNVHSVCWSPNG-ELVASVSEDAVKLWSL-SSGDCIHELS-NSGNKFHSVV 725
Query: 600 I--QLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
L G I++W+ N+ + + GH ++ L
Sbjct: 726 FHPSYPDLLVIGGYQAIELWNTMENK-CMTVAGHECVISAL 765
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRIKK 431
+ I IW+ + + GH +M + F P + L ++N + WD+ + ++
Sbjct: 574 KTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRA 632
Query: 432 LKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLK 611
+KG + V R + L +ASE T + ++ +++ H S V+S
Sbjct: 633 VKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH-SSNVHSVCWSPN 688
Query: 612 -KFLSSGVDNVIKMWDI 659
+ ++S ++ +K+W +
Sbjct: 689 GELVASVSEDAVKLWSL 705
Score = 31.1 bits (67), Expect = 0.76
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP* 521
FS DG L + D V +W++ T + HA+ + V +L S+ + T
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 522 NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKK---FLSSGVDNVIKMWDIRNNQISLKIKG 692
+ G L ++ H + V S KK S +N I+ WDI N +KG
Sbjct: 578 IWDASDPGYFLRTISGH-AAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 693 HTDTV 707
+ V
Sbjct: 636 ASTQV 640
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.0 bits (109), Expect = 6e-06
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Frame = +3
Query: 255 RQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIK 428
+++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++
Sbjct: 532 KKVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLR 589
Query: 429 KLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
+ GHA V S+ + ELL S + R +QV +
Sbjct: 590 TISGHAAPVMSIDFHPKKTELLCSCDSNN--DIRFWDINASCVRAVKGASTQV-RFQPRT 646
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKI-KGHTDTV 707
+FL++ +N + ++DI NN + I KGH+ V
Sbjct: 647 GQFLAAASENTVSIFDIENNNKRVNIFKGHSSNV 680
Score = 45.6 bits (103), Expect = 3e-05
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Frame = +3
Query: 243 CRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT- 419
C I W++ C V +KG A Q+ F P A++NTV+++D+
Sbjct: 614 CDSNNDIRFWDINASC--VRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNK 668
Query: 420 RIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSM 599
R+ KGH++ V+SV + G EL+ S SE + + G +H L+ + ++ +S +
Sbjct: 669 RVNIFKGHSSNVHSVCWSPNG-ELVASVSEDAVKLWSL-SSGDCIHELS-NSGNKFHSVV 725
Query: 600 I--QLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
L G I++W+ N+ + + GH ++ L
Sbjct: 726 FHPSYPDLLVIGGYQAIELWNTMENK-CMTVAGHECVISAL 765
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRIKK 431
+ I IW+ + + GH +M + F P + L ++N + WD+ + ++
Sbjct: 574 KTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRA 632
Query: 432 LKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLK 611
+KG + V R + L +ASE T + ++ +++ H S V+S
Sbjct: 633 VKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH-SSNVHSVCWSPN 688
Query: 612 -KFLSSGVDNVIKMWDI 659
+ ++S ++ +K+W +
Sbjct: 689 GELVASVSEDAVKLWSL 705
Score = 31.1 bits (67), Expect = 0.76
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP* 521
FS DG L + D V +W++ T + HA+ + V +L S+ + T
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 522 NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKK---FLSSGVDNVIKMWDIRNNQISLKIKG 692
+ G L ++ H + V S KK S +N I+ WDI N +KG
Sbjct: 578 IWDASDPGYFLRTISGH-AAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 693 HTDTV 707
+ V
Sbjct: 636 ASTQV 640
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.0 bits (109), Expect = 6e-06
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Frame = +3
Query: 255 RQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIK 428
+++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++
Sbjct: 532 KKVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLR 589
Query: 429 KLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
+ GHA V S+ + ELL S + R +QV +
Sbjct: 590 TISGHAAPVMSIDFHPKKTELLCSCDSNN--DIRFWDINASCVRAVKGASTQV-RFQPRT 646
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKI-KGHTDTV 707
+FL++ +N + ++DI NN + I KGH+ V
Sbjct: 647 GQFLAAASENTVSIFDIENNNKRVNIFKGHSSNV 680
Score = 45.6 bits (103), Expect = 3e-05
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Frame = +3
Query: 243 CRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT- 419
C I W++ C V +KG A Q+ F P A++NTV+++D+
Sbjct: 614 CDSNNDIRFWDINASC--VRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNK 668
Query: 420 RIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSM 599
R+ KGH++ V+SV + G EL+ S SE + + G +H L+ + ++ +S +
Sbjct: 669 RVNIFKGHSSNVHSVCWSPNG-ELVASVSEDAVKLWSL-SSGDCIHELS-NSGNKFHSVV 725
Query: 600 I--QLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
L G I++W+ N+ + + GH ++ L
Sbjct: 726 FHPSYPDLLVIGGYQAIELWNTMENK-CMTVAGHECVISAL 765
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRIKK 431
+ I IW+ + + GH +M + F P + L ++N + WD+ + ++
Sbjct: 574 KTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRA 632
Query: 432 LKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLK 611
+KG + V R + L +ASE T + ++ +++ H S V+S
Sbjct: 633 VKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH-SSNVHSVCWSPN 688
Query: 612 -KFLSSGVDNVIKMWDI 659
+ ++S ++ +K+W +
Sbjct: 689 GELVASVSEDAVKLWSL 705
Score = 31.1 bits (67), Expect = 0.76
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP* 521
FS DG L + D V +W++ T + HA+ + V +L S+ + T
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 522 NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKK---FLSSGVDNVIKMWDIRNNQISLKIKG 692
+ G L ++ H + V S KK S +N I+ WDI N +KG
Sbjct: 578 IWDASDPGYFLRTISGH-AAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 693 HTDTV 707
+ V
Sbjct: 636 ASTQV 640
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.0 bits (109), Expect = 6e-06
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Frame = +3
Query: 255 RQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIK 428
+++ IWN+ Q E+ + H I + F P+ + L T + D T+ +WD G ++
Sbjct: 532 KKVFIWNMETLQVESTP--EEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLR 589
Query: 429 KLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
+ GHA V S+ + ELL S + R +QV +
Sbjct: 590 TISGHAAPVMSIDFHPKKTELLCSCDSNN--DIRFWDINASCVRAVKGASTQV-RFQPRT 646
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKI-KGHTDTV 707
+FL++ +N + ++DI NN + I KGH+ V
Sbjct: 647 GQFLAAASENTVSIFDIENNNKRVNIFKGHSSNV 680
Score = 45.6 bits (103), Expect = 3e-05
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Frame = +3
Query: 243 CRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT- 419
C I W++ C V +KG A Q+ F P A++NTV+++D+
Sbjct: 614 CDSNNDIRFWDINASC--VRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNK 668
Query: 420 RIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSM 599
R+ KGH++ V+SV + G EL+ S SE + + G +H L+ + ++ +S +
Sbjct: 669 RVNIFKGHSSNVHSVCWSPNG-ELVASVSEDAVKLWSL-SSGDCIHELS-NSGNKFHSVV 725
Query: 600 I--QLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
L G I++W+ N+ + + GH ++ L
Sbjct: 726 FHPSYPDLLVIGGYQAIELWNTMENK-CMTVAGHECVISAL 765
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRIKK 431
+ I IW+ + + GH +M + F P + L ++N + WD+ + ++
Sbjct: 574 KTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRA 632
Query: 432 LKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLK 611
+KG + V R + L +ASE T + ++ +++ H S V+S
Sbjct: 633 VKGAS---TQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH-SSNVHSVCWSPN 688
Query: 612 -KFLSSGVDNVIKMWDI 659
+ ++S ++ +K+W +
Sbjct: 689 GELVASVSEDAVKLWSL 705
Score = 31.1 bits (67), Expect = 0.76
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 3/125 (2%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP* 521
FS DG L + D V +W++ T + HA+ + V +L S+ + T
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 522 NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKK---FLSSGVDNVIKMWDIRNNQISLKIKG 692
+ G L ++ H + V S KK S +N I+ WDI N +KG
Sbjct: 578 IWDASDPGYFLRTISGH-AAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKG 635
Query: 693 HTDTV 707
+ V
Sbjct: 636 ASTQV 640
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +3
Query: 231 TFGFCRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 410
TFG +L Q+L+W+ + ++ +GH + + +SPD L TGA DN V VW+V
Sbjct: 322 TFGCAKL-GQLLVWDWRTETY-ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVM 379
Query: 411 TGTRIKKLKGHANFVNSV 464
+GT H N V ++
Sbjct: 380 SGTCFITFTEHTNAVTAL 397
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 258 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
++ +WNV G C + HT A+ L F D L + + D TV WD
Sbjct: 372 KVKVWNVMSGTC--FITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 419
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
+ +W+V+ V + H ++ + F PDG L + D + WD G + ++G
Sbjct: 501 VRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 559
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
+I +W+ GQ ++++ GH + L FSP L + + D TV +WDV
Sbjct: 458 EIFVWSKKTGQIKDIL--SGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDV 506
Score = 28.7 bits (61), Expect = 4.1
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Frame = +3
Query: 342 FSPDGSHLYTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP 518
F+ G+ L G + VWD T T I K +GH VN V+ + +LL + ++
Sbjct: 314 FNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYS-PDSQLLATGADDNK 372
Query: 519 *NYGMQGKGIQLHRLTVHIQS-QVYSSMIQLKKFLSSGVDNVIKMWDIR 662
G T H + M LS+ +D ++ WD +
Sbjct: 373 VKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFK 421
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +3
Query: 231 TFGFCRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 410
TFG +L Q+L+W+ + ++ +GH + + +SPD L TGA DN V VW+V
Sbjct: 362 TFGCAKL-GQLLVWDWRTETY-ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVM 419
Query: 411 TGTRIKKLKGHANFVNSV 464
+GT H N V ++
Sbjct: 420 SGTCFITFTEHTNAVTAL 437
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 258 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
++ +WNV G C + HT A+ L F D L + + D TV WD
Sbjct: 412 KVKVWNVMSGTC--FITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 459
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
+ +W+V+ V + H ++ + F PDG L + D + WD G + ++G
Sbjct: 541 VRLWDVFASKGTVETFR-HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 599
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
+I +W+ GQ ++++ GH + L FSP L + + D TV +WDV
Sbjct: 498 EIFVWSKKTGQIKDIL--SGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDV 546
Score = 28.7 bits (61), Expect = 4.1
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Frame = +3
Query: 342 FSPDGSHLYTGATD-NTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP 518
F+ G+ L G + VWD T T I K +GH VN V+ + +LL + ++
Sbjct: 354 FNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYS-PDSQLLATGADDNK 412
Query: 519 *NYGMQGKGIQLHRLTVHIQS-QVYSSMIQLKKFLSSGVDNVIKMWDIR 662
G T H + M LS+ +D ++ WD +
Sbjct: 413 VKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFK 461
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
+ + IWNV G + V+ GH + FS DG L T ++D T +W +P G +K
Sbjct: 233 KTVKIWNVDG-FKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVY 291
Query: 435 KGH 443
+GH
Sbjct: 292 QGH 294
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +3
Query: 237 GFCRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 416
G C + R + + E + ++ H G I++ SP +L T ++D TV +W+V
Sbjct: 184 GTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGF 243
Query: 417 TRIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGM-QGKGIQLHR 560
K L GH +V + G L+ ++S++T + M GK +++++
Sbjct: 244 KLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQ 292
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
VM HT +M + F D +Y+G+ D TV +WD+
Sbjct: 71 VMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDL 107
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 258 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
+I IW + G C + H+ + L FS DGS L + + D T + + +G +K+
Sbjct: 286 KIKIWRIRTGVC--IRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEF 343
Query: 435 KGHANFVNSVSGARRGPELLVSASEIT 515
+GH ++VN G ++ ++S+ T
Sbjct: 344 RGHTSYVNHAIFTSDGSRIITASSDCT 370
Score = 37.9 bits (84), Expect = 0.007
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA--NFVNSVSGA-----RRGPELLVS 500
FSPDG L + + D + VWD +G K L+ A +F+ R E+L S
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLAS 280
Query: 501 ASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQ-LKKFLSSGVDNVIKMWDIRNNQIS 677
S+ G+ + R H Q S + + LS+ D ++ +++ ++
Sbjct: 281 GSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLL 340
Query: 678 LKIKGHTDTV 707
+ +GHT V
Sbjct: 341 KEFRGHTSYV 350
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+GHT + F+ DGS + T ++D TV VWD T ++ K
Sbjct: 344 RGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFK 386
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
+ + +WN+ C+ + GHTG + + SPDGS +G D V +WD+ G ++ L
Sbjct: 174 KTVKVWNL-SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL 232
Query: 435 KGHA 446
+ ++
Sbjct: 233 EANS 236
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 485
+ GH+ + + S DG +G+ D + +WD+ G ++ GH V SV+ +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 486 ELLVSASEITP*NYGMQGK-------GIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVI 644
+++ ++ + T + G+ G + HR V +S +S+ D +
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVR--FSPNTLQPTIVSASWDKTV 176
Query: 645 KMWDIRNNQISLKIKGHTDTVT 710
K+W++ N ++ + GHT V+
Sbjct: 177 KVWNLSNCKLRSTLAGHTGYVS 198
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVM--KGHTGAIMQLCFSPDGSH--LYTGATDNTVAVWDVPTGTR 422
R I +WN G+C+ + +GH + + FSP+ + + + D TV VW++
Sbjct: 127 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 186
Query: 423 IKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMI 602
L GH +V++V+ + G L S + +G +L+ L + S +++
Sbjct: 187 RSTLAGHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAEGKKLYSLEAN--SVIHALCF 243
Query: 603 QLKKF-LSSGVDNVIKMWDIRNNQISLKIK 689
++ L + ++ IK+WD+ + I +K
Sbjct: 244 SPNRYWLCAATEHGIKIWDLESKSIVEDLK 273
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 336 LCFSPDGSHLYTGATDNTVAVWDV 407
L +S DGS L++G TD + VW +
Sbjct: 301 LNWSADGSTLFSGYTDGVIRVWGI 324
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRG 482
++ HT I + FSP L T + D TV VWD G ++ GH++ V S+
Sbjct: 689 LEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIK 748
Query: 483 PELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDIR 662
+L+ S Y G R+ +Q+ ++ K+L++ N++ + D+
Sbjct: 749 DDLICSCDNDNEIRYWSINNG-SCTRVYKGGSTQI-RFQPRVGKYLAASSANLVNVLDVE 806
Query: 663 NNQISLKIKGHTDTVTGL 716
I ++GH + + +
Sbjct: 807 TQAIRHSLQGHANPINSV 824
Score = 41.1 bits (92), Expect = 7e-04
Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 6/159 (3%)
Frame = +3
Query: 258 QILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
+I W++ G C V + G Q+ F P ++ N V V DV T L
Sbjct: 760 EIRYWSINNGSCTRV-----YKGGSTQIRFQPRVGKYLAASSANLVNVLDVETQAIRHSL 814
Query: 435 KGHANFVNSVSGARRGPELLVSASE--ITP*NYGMQGKGIQLHRLTVH---IQSQVYSSM 599
+GHAN +NSV G + L S SE + G +G +H L+ + QS V+
Sbjct: 815 QGHANPINSVCWDPSG-DFLASVSEDMVKVWTLGTGSEGECVHELSCNGNKFQSCVFHP- 872
Query: 600 IQLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
L G +++W++ N+ ++ + H +T L
Sbjct: 873 -AYPSLLVIGCYQSLELWNMSENK-TMTLPAHEGLITSL 909
Score = 32.7 bits (71), Expect = 0.25
Identities = 28/119 (23%), Positives = 40/119 (33%), Gaps = 2/119 (1%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP* 521
FS DG L + D +W T L+ H + + + L S+ + T
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVR 718
Query: 522 NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFL--SSGVDNVIKMWDIRNNQISLKIKG 692
+ KG L H +K L S DN I+ W I N + KG
Sbjct: 719 VWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKG 777
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 491
G++ I + FS DG + G++D+++ V+D+ + H + VN+V A L
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 492 LVSASEITP*NYGMQ----GKGIQLHRLTVHIQSQVY-SSMIQLKKFLSSGVDNVIKMWD 656
++S S+ + G+ L H++ + S + F+S+G D IK+WD
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Query: 657 IR 662
IR
Sbjct: 347 IR 348
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
M GHT ++ + SPDG + TG++D TV +WD+ I+ + H + V SV+
Sbjct: 239 MSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVA 292
Score = 44.8 bits (101), Expect = 6e-05
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Frame = +3
Query: 327 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 506
++ + +SP+G L G+ D T+ V+DV + +L+GH V S+ + P +L S S
Sbjct: 161 VLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGS 220
Query: 507 EITP*N-YGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSG-VDNVIKMWDIRNNQISL 680
+ N + +GK + L ++ H + +++G D +++WD++
Sbjct: 221 DDGHVNMHDAEGKTL-LGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQ 279
Query: 681 KIKGHTDTV 707
+ H D V
Sbjct: 280 TMSNHNDQV 288
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
QI++W Y + + GHT ++ L SPDG + TGA D T+ W+V
Sbjct: 446 QIIVWK-YPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 36.7 bits (81), Expect = 0.015
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
+ +WN + G ++ + ++ G+HL G + V +WD R + ++G
Sbjct: 233 VYLWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEG 292
Query: 441 HANFVNSVSGARRGPELLVSAS-EITP*NYGMQGKGIQLHRLTVHIQSQV--YSSMIQLK 611
H V +++ G +L S S + + ++ + + +L H +S+V +
Sbjct: 293 HRLRVGALAW---GSSVLSSGSRDKSILQRDIRCQEDHVSKLAGH-KSEVCGLKWSYDNR 348
Query: 612 KFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
+ S G DN + +W+ + Q LK HT V +
Sbjct: 349 ELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAI 383
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/82 (25%), Positives = 38/82 (46%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
+ IL ++ Q ++V + GH + L +S D L +G DN + VW+ + + K
Sbjct: 314 KSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKY 373
Query: 435 KGHANFVNSVSGARRGPELLVS 500
H V +++ + LL S
Sbjct: 374 SEHTAAVKAIAWSPHVHGLLAS 395
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 372 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEIT 515
G + N + VW PT ++I L GH V ++ + G ++ A + T
Sbjct: 441 GYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDET 488
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 470
+N+ ++GH A+ F G ++ TG+ D V +W + T + +GH + ++
Sbjct: 296 QNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAV 355
Query: 471 ARRGPELLVSASEITP*NYGMQGKGIQLHRLTVH---IQSQVYS-SMIQLKKFLSSGVDN 638
+ L+ SAS G+ + L H + + +S + + LSS D
Sbjct: 356 SSNN-ALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDG 414
Query: 639 VIKMWDIRNNQ 671
++WD R +Q
Sbjct: 415 TCRIWDARYSQ 425
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 423 IKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMI 602
IKKL+GH N V R G ++ + + + M+ + L H + + +
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSME-TALCLASCRGH-EGDITDLAV 355
Query: 603 QLKKFLSSGVDN--VIKMWDIRNNQISLKIKGHTDTVTGL 716
L + N VI++W + + ++GHT VT +
Sbjct: 356 SSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAI 395
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
I IW+ G CE + H GA+ L ++ GS L +G+ DN + +WDV + + +L+
Sbjct: 88 IRIWDTEKGTCE--VNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLR 145
Query: 438 GHANFVNSVSGARRGPELLVSASE 509
GH + V + G +L+ S+ +
Sbjct: 146 GHRDQVTDLVFLDGGKKLVSSSKD 169
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
I++W+V G+ + ++GH + L F G L + + D + VWD+ T ++ + G
Sbjct: 130 IILWDVVGE-SGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSG 188
Query: 441 HANFVNSV 464
H + V SV
Sbjct: 189 HHSEVWSV 196
Score = 37.9 bits (84), Expect = 0.007
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 8/155 (5%)
Frame = +3
Query: 267 IWNV-YGQCENVMVMKGHTG----AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
IW+V G C + G A+ + S S + G D ++ +WD GT
Sbjct: 43 IWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSAS-SLVAVGYADGSIRIWDTEKGTCEVN 101
Query: 432 LKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL- 608
H V ++ + G L + + + + G+ L RL H + QV + ++ L
Sbjct: 102 FNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGES-GLFRLRGH-RDQV-TDLVFLD 158
Query: 609 --KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
KK +SS D +++WD+ + GH V
Sbjct: 159 GGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEV 193
Score = 36.3 bits (80), Expect = 0.020
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Frame = +3
Query: 294 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 473
NV MK + ++ + SPD H+ D+TV V+ + + L GH V + +
Sbjct: 533 NVKSMKMNDD-VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDIS 591
Query: 474 RRGPELLVSASEITP*NYGMQGKGI-QLHR-LTVHIQSQVYSSMIQLKKFL-SSGVDNVI 644
G EL+V+ S+ N + G H+ + H S + ++ +L S G D ++
Sbjct: 592 SDG-ELIVTGSQDK--NLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLV 648
Query: 645 KMWDIRNNQISLKIKGH 695
K WD + L ++GH
Sbjct: 649 KYWDADKFEHLLTLEGH 665
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
R + W+ + E+++ ++GH I L S G L TG+ D ++ WD
Sbjct: 646 RLVKYWDA-DKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 RQILIWNV-YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
+ + IW + +G C + H ++M + F + +L++ D V WD +
Sbjct: 604 KNLKIWGLDFGDCHKSIF--AHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLT 661
Query: 432 LKGHANFVNSVSGARRGPELLVSAS 506
L+GH + ++ + RG + LV+ S
Sbjct: 662 LEGHHAEIWCLAISNRG-DFLVTGS 685
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 621 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
S DN I +WD+ +++GH D VT L
Sbjct: 123 SGSKDNDIILWDVVGESGLFRLRGHRDQVTDL 154
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +3
Query: 231 TFGFCRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWD 404
TF L R I IWN+ G + + H + + + G +L TG+ D+T VWD
Sbjct: 157 TFASASLDRTIKIWNL-GSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 405 VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASE 509
T + ++ L+GH + V++VS P ++++ SE
Sbjct: 216 YQTKSCVQTLEGHTHNVSAVSFHPELP-IIITGSE 249
Score = 38.7 bits (86), Expect = 0.004
Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 4/156 (2%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-K 437
I ++N Y + + V + H I + P ++ + + D + +WD G ++ +
Sbjct: 81 IRVYN-YNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFE 139
Query: 438 GHANFVNSVSGARRGPELLVSAS---EITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
GH+++V V+ + SAS I N G L + Y +
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDK 199
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
++ D+ K+WD + ++GHT V+ +
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV 235
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 413
+W+ Y V ++GHT + + F P+ + TG+ D TV +W T
Sbjct: 213 VWD-YQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATT 260
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
++KGH GA++ F+ DG++ T D T+ +W+ G IK K H V V
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDV 66
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/140 (20%), Positives = 58/140 (41%)
Frame = +3
Query: 243 CRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR 422
C R I +WN + + K H + + + D + + D V WDV TG
Sbjct: 36 CGKDRTIRLWNPHRGIL-IKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRV 94
Query: 423 IKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMI 602
I+K +GH VN+V ++ + + + + + ++ ++ V S ++
Sbjct: 95 IRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVL 154
Query: 603 QLKKFLSSGVDNVIKMWDIR 662
+ + VD ++ +D+R
Sbjct: 155 TKTEIIGGSVDGTVRTFDMR 174
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQL--CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
E + V KGH + C + +H+ G+ D V WD+ + K + H V SV
Sbjct: 217 ELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSV 276
Query: 465 S 467
S
Sbjct: 277 S 277
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +3
Query: 612 KFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
KF S G D + WD+ ++ K +GH V +
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAV 108
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 336 LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 443
+ S DG+ + G D+T+ + D TG ++ KGH
Sbjct: 190 ISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH 225
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +3
Query: 261 ILIWNVYGQCEN-----VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRI 425
IL+W E+ + ++GH+G + CF+ G LY+G+ D T+ +WD+ T I
Sbjct: 234 ILVWKATTDSESDPFKYLTSLEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNTLQCI 291
Query: 426 KKLKGHANFVNSV 464
LK H V S+
Sbjct: 292 MTLKQHTGTVTSL 304
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 621 SSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
S VD IKMWD+ Q + +K HT TVT L
Sbjct: 273 SGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL 304
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/49 (22%), Positives = 22/49 (44%)
Frame = +3
Query: 270 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 416
W+ + V ++GH + + L++ + D T+ VWD +G
Sbjct: 115 WSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSG 163
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 482
+ KGH ++ L + G+ L +G T+ + VWD TG++ KL+GH + V + G
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTG 267
Query: 483 PELLVSASEITP*NYGMQGKGIQLHRLTVHIQS 581
L +S+ + + G+ LH VH S
Sbjct: 268 RFCLSGSSDSMIRLWDL-GQQRCLHTYAVHTDS 299
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +3
Query: 369 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGI 548
+G V +WD+ AN +S +GA GP + + N +Q
Sbjct: 144 SGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGAN-GPVTSLRTVGSSN-NISVQSSPS 201
Query: 549 QLHRLTV---HIQSQVYSSMIQLKKFL-SSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
+ T+ H +S +M L S G + V+++WD R S+K++GHTD V
Sbjct: 202 HGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNV 258
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 413
I +W++ GQ + HT ++ L +P SH+Y+G D + + D+ T
Sbjct: 279 IRLWDL-GQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLAT 328
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +3
Query: 300 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
M ++GHT + L G +G++D+ + +WD+
Sbjct: 249 MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 482
+ KGH ++ L + G+ L +G T+ + VWD TG++ KL+GH + V + G
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTG 267
Query: 483 PELLVSASEITP*NYGMQGKGIQLHRLTVHIQS 581
L +S+ + + G+ LH VH S
Sbjct: 268 RFCLSGSSDSMIRLWDL-GQQRCLHTYAVHTDS 299
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +3
Query: 369 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGI 548
+G V +WD+ AN +S +GA GP + + N +Q
Sbjct: 144 SGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGAN-GPVTSLRTVGSSN-NISVQSSPS 201
Query: 549 QLHRLTV---HIQSQVYSSMIQLKKFL-SSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
+ T+ H +S +M L S G + V+++WD R S+K++GHTD V
Sbjct: 202 HGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNV 258
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 413
I +W++ GQ + HT ++ L +P SH+Y+G D + + D+ T
Sbjct: 279 IRLWDL-GQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLAT 328
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +3
Query: 300 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
M ++GHT + L G +G++D+ + +WD+
Sbjct: 249 MKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/135 (20%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 485
+ GH+ + + S DG +G+ D + +WD+ TG ++ GH V SV+ +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 486 ELLVSASEITP*NYGMQGK-GIQLHRLTVH---IQSQVYSSMIQLKKFLSSGVDNVIKMW 653
+++ ++ + T + G+ + H + +S + +S+ D +K+W
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Query: 654 DIRNNQISLKIKGHT 698
+++N ++ + GH+
Sbjct: 179 NLQNCKLRNSLVGHS 193
Score = 44.0 bits (99), Expect = 1e-04
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Frame = +3
Query: 255 RQILIWNVYGQCE-NVMVMKGHTGAIMQLCFSPDG--SHLYTGATDNTVAVWDVPTGTRI 425
R I +WN G+C+ + GH + + FSP+ + + + D TV VW++
Sbjct: 127 RTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 426 KKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQ 605
L GH+ ++N+V+ + G L S + +G +L+ L S ++S
Sbjct: 187 NSLVGHSGYLNTVAVSPDG-SLCASGGKDGVILLWDLAEGKKLYSL--EAGSIIHSLCFS 243
Query: 606 LKKF-LSSGVDNVIKMWDIRNNQISLKIK 689
++ L + +N I++WD+ + + +K
Sbjct: 244 PNRYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Frame = +3
Query: 432 LKGHANFVNSVSGARRGPELLVSASE-----ITP*NYGMQGKGIQLHRLTVH---IQSQV 587
++ H + V +++ +++V+AS + + G+ RLT H ++ V
Sbjct: 11 MRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVV 70
Query: 588 YSSMIQLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
SS Q LS D +++WD+ + + + GHT V
Sbjct: 71 LSSDGQFA--LSGSWDGELRLWDLATGETTRRFVGHTKDV 108
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 336 LCFSPDGSHLYTGATDNTVAVWDV 407
L +S DGS L++G TD V VW +
Sbjct: 300 LNWSADGSTLFSGYTDGVVRVWGI 323
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKK 431
R ++++ + ++V+ GHT + F D + TG+TD ++ WD+ G R ++
Sbjct: 235 RNAYVYDIRRLVDPLIVLDGHTKTVTYARFM-DSHTIVTGSTDGSLKQWDIDNGRRVVRT 293
Query: 432 LKGHANFVNSVS-GARRGPELLVSASE 509
+GH N N V R L+VS SE
Sbjct: 294 YRGHVNSRNFVGLSVWRHGGLVVSGSE 320
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
QI++W Y V + GH+ ++ L SPDG + TGA D T+ W+V
Sbjct: 409 QIMLWK-YPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/82 (29%), Positives = 38/82 (46%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
R IL ++ Q + V + GH + L +S D L +G DN + VW+ + I KL
Sbjct: 277 RNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKL 336
Query: 435 KGHANFVNSVSGARRGPELLVS 500
H V +++ + LL S
Sbjct: 337 TEHTAAVKAITWSPHQSSLLAS 358
Score = 33.1 bits (72), Expect = 0.19
Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
+ +W + G ++ + ++ +GS++ G + V VWD R++ + G
Sbjct: 196 VYLWTASNSKVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGG 255
Query: 441 HANFVNSVSGARRGPELLVSAS-EITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL--K 611
H ++ R +L S S + + ++ + + +L H +S+V +
Sbjct: 256 HQTRTGVLAWNSR---ILSSGSRDRNILQHDIRVQSDFVSKLVGH-KSEVCGLKWSHDDR 311
Query: 612 KFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
+ S G DN + +W+ + Q LK+ HT V +
Sbjct: 312 ELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAI 346
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
QI++W Y + + GH+ ++ L SPDG + TGA D T+ W+V
Sbjct: 403 QIIVWK-YPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
+ IL ++ Q ++V +KGH I L +S D L +G DN + VW+ + + +
Sbjct: 271 KSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRF 330
Query: 435 KGHANFVNSVSGARRGPELLVS 500
HA V +++ + LL S
Sbjct: 331 CEHAAAVKAIAWSPHHFGLLAS 352
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLK 437
+ IW+V +C+N+ M+GH + L +S S L +G+ D ++ D+ T + KLK
Sbjct: 233 VQIWDVL-RCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDIRTQEDHVSKLK 289
Query: 438 GHANFVNSVSGARRGPEL 491
GH + + + + EL
Sbjct: 290 GHKSEICGLKWSSDNREL 307
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
+ +WN + G + + ++ G+HL G + TV +WDV I+ ++G
Sbjct: 190 VYLWNACSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEG 249
Query: 441 H 443
H
Sbjct: 250 H 250
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/52 (30%), Positives = 31/52 (59%)
Frame = +1
Query: 106 GTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTGKFHPEGKHLASAGFEDK 261
G+R+K+++ + RT + + L+GH+ EI K+ + + LAS G ++K
Sbjct: 267 GSRDKSILQRDI-RTQEDH--VSKLKGHKSEICGLKWSSDNRELASGGNDNK 315
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 372 GATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEIT 515
G + N + VW PT +++ L GH+ V ++ + G ++ A + T
Sbjct: 398 GYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDET 445
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 285 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
+ VM +KGH A+ LCFSP+ + T + D ++ VW++
Sbjct: 278 EVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNI 318
Score = 34.3 bits (75), Expect = 0.082
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 401
+KGH A+ LCFS DG L T D + V+
Sbjct: 82 LKGHGDAVTGLCFSSDGKSLATACADGVIRVF 113
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +3
Query: 231 TFGFCRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWD 404
TF L R I IWN+ G + + H + + + G +L TG+ D+T VWD
Sbjct: 157 TFASASLDRTIKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 405 VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASE 509
T + ++ L+GH + V++V P ++++ SE
Sbjct: 216 YQTKSCVQTLEGHTHNVSAVCFHPELP-IIITGSE 249
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 4/156 (2%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-K 437
I ++N Y + V V + H+ I + P ++ + + D + +WD G ++ +
Sbjct: 81 IRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFE 139
Query: 438 GHANFVNSVSGARRGPELLVSAS---EITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
GH+++V V+ + SAS I N G L + Y +
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
++ D+ K+WD + ++GHT V+ +
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAV 235
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 413
+W+ Y V ++GHT + +CF P+ + TG+ D TV +W T
Sbjct: 213 VWD-YQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 36.7 bits (81), Expect = 0.015
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 4/135 (2%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLK 437
I +W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++ + L
Sbjct: 123 IKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
Query: 438 GHANFVNSVSGARRG--PELLVSASEITP*NYGMQGKG-IQLHRLTVHIQSQVYSSMIQL 608
H VN V G P L+ + + T + Q K +Q H S V +L
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHP-EL 241
Query: 609 KKFLSSGVDNVIKMW 653
++ D +++W
Sbjct: 242 PIIITGSEDGTVRIW 256
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
H ++ L +SPD ++L +G+ DN+ +WDV G+ + L H ++V V+
Sbjct: 52 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVA 102
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
H ++ L +SPD ++L +G+ DN+ +WDV G+ + L H ++V V+
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVA 161
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
H ++ L +SPD ++L +G+ DN+ +WDV G+ + L H ++V V+
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVA 161
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 42.3 bits (95), Expect = 3e-04
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSH-----LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
++ GHT + L + P L +G+ D V VW++ G I+ LKGH V+
Sbjct: 61 ILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQ---MQVT 117
Query: 468 GARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLK--KFLSSGVDNV 641
G E +VS+S G+ ++ H QS + ++I+L + +S D
Sbjct: 118 GVAIDNEDIVSSSVDQTLKRWRNGQLVE--SWDAH-QSPI-QAVIRLPSGELVSGSSDAS 173
Query: 642 IKMWDIRNNQISLK-IKGHTDTVTGL 716
+K+W + SL+ + GHTDTV GL
Sbjct: 174 LKLW---KGKTSLQTLSGHTDTVRGL 196
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 42.3 bits (95), Expect = 3e-04
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSH-----LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
++ GHT + L + P L +G+ D V VW++ G I+ LKGH V+
Sbjct: 61 ILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQ---MQVT 117
Query: 468 GARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLK--KFLSSGVDNV 641
G E +VS+S G+ ++ H QS + ++I+L + +S D
Sbjct: 118 GVAIDNEDIVSSSVDQTLKRWRNGQLVE--SWDAH-QSPI-QAVIRLPSGELVSGSSDAS 173
Query: 642 IKMWDIRNNQISLK-IKGHTDTVTGL 716
+K+W + SL+ + GHTDTV GL
Sbjct: 174 LKLW---KGKTSLQTLSGHTDTVRGL 196
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +3
Query: 231 TFGFCRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWD 404
TF L R I IWN+ G + + H + + + G +L TG+ D+T VWD
Sbjct: 157 TFASASLDRTIKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 405 VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASE 509
T + ++ L GH + V++V P ++++ SE
Sbjct: 216 YQTKSCVQTLDGHTHNVSAVCFHPELP-IIITGSE 249
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/156 (20%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-K 437
I ++N Y + V V + H+ I + P ++ + + D + +WD G ++ +
Sbjct: 81 IRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE 139
Query: 438 GHANFVNSVSGARRGPELLVSAS---EITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
GH+++V V + SAS I N G L + Y +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
++ D+ K+WD + + GHT V+ +
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAV 235
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 413
+W+ Y V + GHT + +CF P+ + TG+ D TV +W T
Sbjct: 213 VWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 36.7 bits (81), Expect = 0.015
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 4/135 (2%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLK 437
I +W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++ + L
Sbjct: 123 IKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
Query: 438 GHANFVNSVSGARRG--PELLVSASEITP*NYGMQGKG-IQLHRLTVHIQSQVYSSMIQL 608
H VN V G P L+ + + T + Q K +Q H S V +L
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP-EL 241
Query: 609 KKFLSSGVDNVIKMW 653
++ D +++W
Sbjct: 242 PIIITGSEDGTVRIW 256
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +3
Query: 231 TFGFCRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWD 404
TF L R I IWN+ G + + H + + + G +L TG+ D+T VWD
Sbjct: 157 TFASASLDRTIKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 405 VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASE 509
T + ++ L GH + V++V P ++++ SE
Sbjct: 216 YQTKSCVQTLDGHTHNVSAVCFHPELP-IIITGSE 249
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/156 (20%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-K 437
I ++N Y + V V + H+ I + P ++ + + D + +WD G ++ +
Sbjct: 81 IRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE 139
Query: 438 GHANFVNSVSGARRGPELLVSAS---EITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
GH+++V V + SAS I N G L + Y +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
++ D+ K+WD + + GHT V+ +
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAV 235
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 413
+W+ Y V + GHT + +CF P+ + TG+ D TV +W T
Sbjct: 213 VWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 36.7 bits (81), Expect = 0.015
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 4/135 (2%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLK 437
I +W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++ + L
Sbjct: 123 IKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
Query: 438 GHANFVNSVSGARRG--PELLVSASEITP*NYGMQGKG-IQLHRLTVHIQSQVYSSMIQL 608
H VN V G P L+ + + T + Q K +Q H S V +L
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP-EL 241
Query: 609 KKFLSSGVDNVIKMW 653
++ D +++W
Sbjct: 242 PIIITGSEDGTVRIW 256
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +3
Query: 231 TFGFCRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGS--HLYTGATDNTVAVWD 404
TF L R I IWN+ G + + H + + + G +L TG+ D+T VWD
Sbjct: 157 TFASASLDRTIKIWNL-GSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 405 VPTGTRIKKLKGHANFVNSVSGARRGPELLVSASE 509
T + ++ L GH + V++V P ++++ SE
Sbjct: 216 YQTKSCVQTLDGHTHNVSAVCFHPELP-IIITGSE 249
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/156 (20%), Positives = 61/156 (39%), Gaps = 4/156 (2%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-K 437
I ++N Y + V V + H+ I + P ++ + + D + +WD G ++ +
Sbjct: 81 IRVYN-YNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFE 139
Query: 438 GHANFVNSVSGARRGPELLVSAS---EITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
GH+++V V + SAS I N G L + Y +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDK 199
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
++ D+ K+WD + + GHT V+ +
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAV 235
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 413
+W+ Y V + GHT + +CF P+ + TG+ D TV +W T
Sbjct: 213 VWD-YQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 36.7 bits (81), Expect = 0.015
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 4/135 (2%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLK 437
I +W+ + +GH+ +MQ+ F+P ++ + A+ D T+ +W++ + L
Sbjct: 123 IKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLD 182
Query: 438 GHANFVNSVSGARRG--PELLVSASEITP*NYGMQGKG-IQLHRLTVHIQSQVYSSMIQL 608
H VN V G P L+ + + T + Q K +Q H S V +L
Sbjct: 183 AHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHP-EL 241
Query: 609 KKFLSSGVDNVIKMW 653
++ D +++W
Sbjct: 242 PIIITGSEDGTVRIW 256
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASE 509
F PDG L TG + + V +WDV + + K GH V ++S + G L +A +
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Score = 33.1 bits (72), Expect = 0.19
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSVSGAR 476
+ GH+ + + F D + T + D TV +W P L H+ V +V+
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVT-VH 318
Query: 477 RGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGV---DNVIK 647
+ VSAS + G L +++ ++ Y++ L G +V+K
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVK 378
Query: 648 MWDIRNNQISLKIKGHTDTVTGL 716
+WD+++ K GHT VT +
Sbjct: 379 IWDVKSQANVAKFDGHTGEVTAI 401
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = +3
Query: 369 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGI 548
TG D T ++D P+G + L GH+ V SV +L ++++ T + G G
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 549 QLHRLTVHIQS-QVYSSMIQ--LKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
T++ S +V + + K F+S+ +D +D+ + ++ + V
Sbjct: 299 YACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASE 509
F PDG L TG + + V +WDV + + K GH V ++S + G L +A +
Sbjct: 361 FHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Score = 33.1 bits (72), Expect = 0.19
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK---KLKGHANFVNSVSGAR 476
+ GH+ + + F D + T + D TV +W P L H+ V +V+
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVT-VH 318
Query: 477 RGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGV---DNVIK 647
+ VSAS + G L +++ ++ Y++ L G +V+K
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVK 378
Query: 648 MWDIRNNQISLKIKGHTDTVTGL 716
+WD+++ K GHT VT +
Sbjct: 379 IWDVKSQANVAKFDGHTGEVTAI 401
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = +3
Query: 369 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGI 548
TG D T ++D P+G + L GH+ V SV +L ++++ T + G G
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 549 QLHRLTVHIQS-QVYSSMIQ--LKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
T++ S +V + + K F+S+ +D +D+ + ++ + V
Sbjct: 299 YACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 428
GH AI LC + D SH TG+ D T +WD+ T T IK
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIK 256
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
E + +GH+GA+ S D S L TG+ D T +WDV +G + K
Sbjct: 70 ERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFK 118
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 300 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 479
++MKGH + L ++ +G L++ A D+T VW G R+ +GH+ V +R
Sbjct: 31 ILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRD 90
Query: 480 GPELLVSASEIT 515
L+ +++ T
Sbjct: 91 SSRLITGSADQT 102
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 392
E + +KGH G I L FSPDG +G D V
Sbjct: 308 EEIGGVKGHFGPINALAFSPDGKSFSSGGEDGYV 341
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCEN-VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
++I +WN + + V + H A+ L S DG LY+GA D ++ VW+ ++
Sbjct: 256 KKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEE 315
Query: 432 LKGHANFVNSVSGARRGPELLVSASEI 512
L H + V ++ G R+ L AS++
Sbjct: 316 L--HMSVVGALRGHRKAIMCLAVASDL 340
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRGPEL 491
H A+ L S DGS LY+ + D + +W + + K H + +N++ ++ G
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVY 250
Query: 492 LVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGV-DNVIKMWD 656
SA + K + LT H+ + ++ + K L SG D I +W+
Sbjct: 251 TGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWE 306
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 479
GH G + LCF + L++G+ D T+++W+ T I+ GH + + S+ R
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGR 316
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 41.1 bits (92), Expect = 7e-04
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 10/164 (6%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGA------IMQLCFSPDGS-HLYTGATDNTVAVWDVPT 413
++I +W GQ + + G G + + FS GS ++ +G T V +WD+
Sbjct: 65 KKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIWDLQR 124
Query: 414 GTRIKKLKGHANFVNSVSGARRGPELL-VS-ASEITP*NYGMQGKGIQLHRLTVHIQSQV 587
IKKLKGH + + V + L VS ++ N + +L + +
Sbjct: 125 KLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLL 184
Query: 588 YSSMIQLKKFLSSGVDNVIKMWDIRNNQISLK-IKGHTDTVTGL 716
S +++G D + +WD + +K H+ G+
Sbjct: 185 DYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGV 228
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
+W+ V GH G + + F PDG TG+ D T ++D+ TG +++ + H
Sbjct: 231 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHG 290
Query: 447 NFVN 458
+ N
Sbjct: 291 DGEN 294
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL-----KGHANFVNSV 464
++ GH G + + P + +HL T + D T +WDV TG + GH V SV
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 210
Query: 465 SGARRGPELLVSAS 506
S + P +S S
Sbjct: 211 SISGSNPNWFISGS 224
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
++GHTG + L ++P+ + + + + D + VW+ T + +K
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIK 104
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
+W+ V GH G + + F PDG TG+ D T ++D+ TG +++ + H
Sbjct: 169 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHG 228
Query: 447 NFVN 458
+ N
Sbjct: 229 DGEN 232
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL-----KGHANFVNSV 464
++ GH G + + P + +HL T + D T +WDV TG + GH V SV
Sbjct: 89 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 148
Query: 465 SGARRGPELLVSAS 506
S + P +S S
Sbjct: 149 SISGSNPNWFISGS 162
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
+W+ V GH G + + F PDG TG+ D T ++D+ TG +++ + H
Sbjct: 231 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHG 290
Query: 447 NFVN 458
+ N
Sbjct: 291 DGEN 294
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKL-----KGHANFVNSV 464
++ GH G + + P + +HL T + D T +WDV TG + GH V SV
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSV 210
Query: 465 SGARRGPELLVSAS 506
S + P +S S
Sbjct: 211 SISGSNPNWFISGS 224
Score = 32.3 bits (70), Expect = 0.33
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
++GHTG + L ++P+ + + + + D + VW+ T + +K
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIK 104
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 428
KGHTGA+ + G + +G+TD +V +W+V TG +K
Sbjct: 420 KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK 459
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 41.1 bits (92), Expect = 7e-04
Identities = 29/148 (19%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFS-PDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ +W+V + +++M + H + FS + S L +G+ D V VW + +
Sbjct: 445 VTVWDVTTR-QSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINID 503
Query: 438 GHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKF 617
AN + V +++ Y ++ LH + H ++ Y + +
Sbjct: 504 MKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNEL 563
Query: 618 LSSGVDNVIKMWDIRNNQISLKIKGHTD 701
S+ D+ +++WD+++N +GHT+
Sbjct: 564 ASASTDSTLRLWDVKDNLPVRTFRGHTN 591
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 482
V GH A+ + F + + L + +TD+T+ +WDV ++ +GH N N V G
Sbjct: 544 VFSGHKKAVSYVKFLSN-NELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFV-GLTVN 601
Query: 483 PELLVSASE 509
E L SE
Sbjct: 602 SEYLACGSE 610
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 357 SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASE 509
+H+ + + V VWDV T + + + H SV +R P +LVS S+
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSD 484
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/93 (24%), Positives = 43/93 (46%)
Frame = +3
Query: 237 GFCRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 416
G C + R + + E + ++ H I++ SP +L T ++D TV +W++
Sbjct: 190 GTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGF 249
Query: 417 TRIKKLKGHANFVNSVSGARRGPELLVSASEIT 515
K L GH +V + G L+ ++S+ T
Sbjct: 250 KLEKVLTGHERWVWDCDFSMDGEYLVTASSDTT 282
Score = 36.3 bits (80), Expect = 0.020
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
+ + IWN+ G + V+ GH + FS DG +L T ++D T +W + G
Sbjct: 239 KTVKIWNLDG-FKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVY 297
Query: 435 KGH 443
+ H
Sbjct: 298 QAH 300
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
HT +M + F G +Y+G+ D +V +WD+
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDL 113
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR--G 482
+GH G I L S + + + + D + VW +P G + L+GH V +++ + R
Sbjct: 284 RGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGS 343
Query: 483 PELLVSASE 509
P L+S+S+
Sbjct: 344 PYQLLSSSD 352
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 470
+N+ ++GH A+ G ++ TG+ D V VW + T + +GH + ++
Sbjct: 236 QNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAV 295
Query: 471 ARRGPELLVSASEITP*NYGMQGKGIQLHRLTVH---IQSQVYSSMI-QLKKFLSSGVDN 638
+ + SAS G+ + L H + + +S + LSS D
Sbjct: 296 SSNN-IFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDG 354
Query: 639 VIKMWDIRNNQISLKI 686
++WD R Q + +I
Sbjct: 355 TCRIWDARGAQFAPRI 370
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-------HANFV 455
V V+KGH G + L F P+G L + T TV W++ G LKG + + V
Sbjct: 139 VRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIV 198
Query: 456 NSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLT-VHIQSQVYSSMIQLKKFL-SSG 629
N + G L V Y + G +L L H+++ Y + K++ +SG
Sbjct: 199 NIPRWSPDGRTLAVPGLRNDVVMYD-RFTGEKLFALRGDHLEAICYLTWAPNGKYIATSG 257
Query: 630 VDNVIKMWDIRNNQ 671
+D + +WD+ Q
Sbjct: 258 LDKQVLLWDVDKKQ 271
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 291 ENVMVMKG-HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
E + ++G H AI L ++P+G ++ T D V +WDV
Sbjct: 228 EKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDV 267
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 169 IMLLEGHQGEIFTGKFHPEGKHLAS 243
+ +L+GH+G + FHP G+ LAS
Sbjct: 139 VRVLKGHKGPVTGLDFHPNGELLAS 163
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
E + +GH GA+ S D S L TG+ D T +WDV +G + K +A
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNA 94
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 428
GH I LC + D SH TG+ D T +WD+ T T +K
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLK 229
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +3
Query: 300 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 479
++MKGH + L ++ +G L++ A D+T +W G R+ +GH V +R
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Query: 480 GPELLVSASEIT 515
L+ +++ T
Sbjct: 64 SSRLITGSADQT 75
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
E + +GH GA+ S D S L TG+ D T +WDV +G + K +A
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNA 94
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 428
GH I LC + D SH TG+ D T +WD+ T T +K
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLK 229
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +3
Query: 300 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 479
++MKGH + L ++ +G L++ A D+T +W G R+ +GH V +R
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Query: 480 GPELLVSASEIT 515
L+ +++ T
Sbjct: 64 SSRLITGSADQT 75
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 392
E + +KGH G I L F+PDG +G D V
Sbjct: 281 EEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYV 314
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
E + +GH GA+ S D S L TG+ D T +WDV +G + K +A
Sbjct: 43 ERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNA 94
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 428
GH I LC + D SH TG+ D T +WD+ T T +K
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLK 229
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +3
Query: 300 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARR 479
++MKGH + L ++ +G L++ A D+T +W G R+ +GH V +R
Sbjct: 4 ILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Query: 480 GPELLVSASEIT 515
L+ +++ T
Sbjct: 64 SSRLITGSADQT 75
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 392
E + +KGH G I L F+PDG +G D V
Sbjct: 281 EEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYV 314
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
V + GH G I L FSPDG +L TG D V +W +
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRI 227
Score = 35.5 bits (78), Expect = 0.035
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 169 IMLLEGHQGEIFTGKFHPEGKHLASAG 249
+ + GH+G+I+T KF P+GK+LA+ G
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYLATGG 217
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSA 503
F PDG L TG + V +WDV + + K GH + S+S + G L +A
Sbjct: 362 FHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAA 415
Score = 36.3 bits (80), Expect = 0.020
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG---TRIKKLKGHANFVNSVSGAR 476
+ GH+ + + F D + T ++D TV +W T LK H+ V +V+
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVT-VH 318
Query: 477 RGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKK---FLSSGV-DNVI 644
+ VSAS + + G+ L ++T ++ V + L +G +++
Sbjct: 319 ATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIV 378
Query: 645 KMWDIRNNQISLKIKGHTDTVTGL 716
K+WD+++ K GH +T +
Sbjct: 379 KIWDVKSQANVAKFGGHNGEITSI 402
Score = 34.3 bits (75), Expect = 0.082
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Frame = +3
Query: 369 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGI 548
TG D T ++D P+G + L GH+ V S+ +L ++S+ T +G G
Sbjct: 239 TGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGN 298
Query: 549 QLHRLTVHIQS-QVYSSMIQL--KKFLSSGVDNVIKMWDI 659
R T+ S +V + + K F+S+ +D+ +D+
Sbjct: 299 YTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDL 338
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
Q IW + G E + + H G I L ++ G +L TG+ D T VWDV
Sbjct: 347 QARIWTLNG--ELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDV 394
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 294 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 419
+V +++GHT + +SP S L +G+ D T +W +P G+
Sbjct: 257 DVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGS 298
Score = 38.7 bits (86), Expect = 0.004
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 443
GH + L FSP+G ++ +G+ D ++ +W + G +K G+
Sbjct: 539 GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN 582
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +3
Query: 282 GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS 461
G+ GH G + + + P GS L + + D+T +W++ T + L+ H + +
Sbjct: 436 GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYT 495
Query: 462 VSGARRGP 485
+ + GP
Sbjct: 496 IRWSPTGP 503
Score = 31.5 bits (68), Expect = 0.58
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSH---------LYTGATDNTVAVWDVPTGT 419
IWN+ Q V ++ HT I + +SP G L + + D+TV +WD G
Sbjct: 474 IWNIK-QSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGK 532
Query: 420 RIKKLKGHANFVNSVSGARRGPELLVSAS 506
+ GH V S++ + G E + S S
Sbjct: 533 MLCSFNGHREPVYSLAFSPNG-EYIASGS 560
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 488 TLSFSFRDNTIKLWDARKRNPVASFDS-SYPVTSVLFNDTAEKI 616
TL+ + D+T+KLWDA + SF+ PV S+ F+ E I
Sbjct: 513 TLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYI 556
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGAR 476
V V++GH ++M + F P S L+TG+ D + +WD + H+ N V
Sbjct: 10 VAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSR-ANGVLAVA 68
Query: 477 RGPEL 491
P L
Sbjct: 69 ASPWL 73
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 401
+I ++N Y + + ++K H + +SPD + + + D TVA+W
Sbjct: 331 RIRVYN-YRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 491
HT +++ L ++ + ++ A+ D V VWDV TGT ++ H V +V+ PE+
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 492 LVSAS--EITP*NYGMQ--GKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDI 659
L+S S + G Q G + ++ ++S + + F+ S D +K +D+
Sbjct: 292 LLSGSFDQTVVLKDGRQPSHSGFKWSVMS-DVESLAWDPHSE-HSFVVSLEDGTVKGFDV 349
Query: 660 RNNQISLKIKGHTDTVTG 713
R IS + T+ G
Sbjct: 350 RQASISASESNPSFTING 367
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPEL 491
HT +++ L ++ + ++ A+ D V VWDV TGT ++ H V +V+ PE+
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 492 LVSAS 506
L+S S
Sbjct: 324 LLSGS 328
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
+W++ ++V V+KG+ GAI + ++ DG ++ + V V+DV G ++
Sbjct: 345 VWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ---EI 401
Query: 447 NFVNSVSGARRGPE 488
+F +SG P+
Sbjct: 402 DFFGEISGISFSPD 415
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSV 464
+ GH + PDG TG D T VWD+ + LKG+ + S+
Sbjct: 315 LSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSI 368
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 261 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ +W+ G ++ + G + + ++PDG H+ G ++ V +WD + +++ LK
Sbjct: 162 VYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLK 221
Query: 438 -GHANFVNSVS 467
GH + V S++
Sbjct: 222 GGHQSRVGSLA 232
Score = 35.5 bits (78), Expect = 0.035
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
Q+ +W Y + + GHT ++ + SPDG + + A D T+ W+V
Sbjct: 383 QLTLWK-YPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
V +GHT + L +S G L +G DN V +WD
Sbjct: 259 VETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
Score = 31.1 bits (67), Expect = 0.76
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Frame = +3
Query: 375 ATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGI 548
A D+TV +WD TG + + + V S++ A G + V + +
Sbjct: 157 ALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNN-SEVQLWDSASNR 215
Query: 549 QLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDIR-NNQISLKIKGHTDTVTGL 716
QL L QS+V S + G+D +I D+R + I +GHT V GL
Sbjct: 216 QLRTLKGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGL 272
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +3
Query: 255 RQILIWNVY-GQCENVMVMKGHTGA-IMQLCFSPDGSHLYT--GATDNTVAVWDVPTGTR 422
R I WN + G C N + TG+ + L +S + L + G T N + +W P+ +
Sbjct: 339 RTIKFWNTHTGACLNSV----DTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVK 394
Query: 423 IKKLKGHANFVNSVSGARRGPELLVSASEIT 515
+ +L GH + V ++ + G + +A + T
Sbjct: 395 MAELTGHTSRVLYMAQSPDGCTVASAAGDET 425
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 261 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ +W+ G ++ + G + + ++PDG H+ G ++ V +WD + +++ LK
Sbjct: 152 VYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLK 211
Query: 438 -GHANFVNSVS 467
GH + V S++
Sbjct: 212 GGHQSRVGSLA 222
Score = 35.5 bits (78), Expect = 0.035
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
Q+ +W Y + + GHT ++ + SPDG + + A D T+ W+V
Sbjct: 373 QLTLWK-YPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
V +GHT + L +S G L +G DN V +WD
Sbjct: 249 VETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
Score = 31.1 bits (67), Expect = 0.76
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Frame = +3
Query: 375 ATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGI 548
A D+TV +WD TG + + + V S++ A G + V + +
Sbjct: 147 ALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNN-SEVQLWDSASNR 205
Query: 549 QLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDIR-NNQISLKIKGHTDTVTGL 716
QL L QS+V S + G+D +I D+R + I +GHT V GL
Sbjct: 206 QLRTLKGGHQSRVGSLAWNNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGL 262
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +3
Query: 255 RQILIWNVY-GQCENVMVMKGHTGA-IMQLCFSPDGSHLYT--GATDNTVAVWDVPTGTR 422
R I WN + G C N + TG+ + L +S + L + G T N + +W P+ +
Sbjct: 329 RTIKFWNTHTGACLNSV----DTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVK 384
Query: 423 IKKLKGHANFVNSVSGARRGPELLVSASEIT 515
+ +L GH + V ++ + G + +A + T
Sbjct: 385 MAELTGHTSRVLYMAQSPDGCTVASAAGDET 415
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
V +GHT I LCFS DG + + + D ++ +WDV
Sbjct: 550 VREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDV 586
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +3
Query: 285 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
+C + +K H+ A+ L + D LY+ + D TV VW + I+ +K H + VNSV
Sbjct: 125 RCRTALWIK-HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV 183
Query: 465 SGA 473
+ A
Sbjct: 184 TTA 186
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 12/64 (18%)
Frame = +3
Query: 255 RQILIWNVYGQCEN-VMVMKGHTGAIMQLCF-SPDGSH----------LYTGATDNTVAV 398
++I +W G+ V V+ GHTG + L P G LY+G+ D +V V
Sbjct: 286 KKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLYSGSLDKSVKV 345
Query: 399 WDVP 410
W VP
Sbjct: 346 WRVP 349
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSVS 467
V K H A+ LC + G L++GA D + VW + T + L GH V ++
Sbjct: 261 VFKKHRLAV--LCIAAAGKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLA 315
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +3
Query: 267 IWNV--YGQCE-NVMVMKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTG 416
IWN+ +G + + +KGHT ++ QLC+ P S L T + D +V +WD +G
Sbjct: 46 IWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSG 99
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTG-TRIK--KLKGHANFVNSVSGAR 476
+GH + + ++ +G+ L +G+ D T +W++ P G ++ K +LKGH + V+ +
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 477 RGPELLVSAS 506
+ +L+ +AS
Sbjct: 77 KHSDLVATAS 86
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +3
Query: 279 YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVN 458
Y + + + HT + P G + G+ D+ V++WD+ ++ V
Sbjct: 178 YPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVR 237
Query: 459 SVSGARRGPELLVSASE 509
++S G E + SASE
Sbjct: 238 TISFNYSG-EYIASASE 253
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 255 RQILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
+ + +W+ G+C + + G + + + PDG+H+ G D+ + + DV
Sbjct: 89 KSVRLWDARSGKCTQQVELSGEN---INITYKPDGTHVAVGNRDDELTILDV 137
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +3
Query: 612 KFLSSGVDNVIKMWDIRNNQIS----LKIKGHTDTVTGL 716
K S VD ++W+I + S L++KGHTD+V L
Sbjct: 34 KLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRIKKLKG--HANF-VNSVSGA 473
+ GHT A+ + +S HL A D V VW+V + + KK++ H N V V +
Sbjct: 156 LTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDK-KKVRAFLHHNAPVKDVKWS 214
Query: 474 RRGPELLVSASEITP*NYGMQGKGIQLHRLTV-HIQSQVYSSMIQLKKFLSSGVDNVIKM 650
++G LL + T + ++ +G++ + V FLS G +++
Sbjct: 215 KQGLSLLSCGYDCTSRLFDVE-RGVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRL 273
Query: 651 WDIRNNQ 671
WDIR N+
Sbjct: 274 WDIRANK 280
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 309 KGH--TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 443
+GH G ++ FSPDG L +G++D +V ++D + IKKLK +
Sbjct: 381 EGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAY 427
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 38.7 bits (86), Expect = 0.004
Identities = 40/158 (25%), Positives = 61/158 (38%), Gaps = 23/158 (14%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG-----HANFVNSVSG 470
++ H G I + FSPD L + D + VW+V + +G H + S
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMSMNEGSLTPIHPSMSGSTDK 466
Query: 471 ARRGPELLVSASEITP*NYGMQGKGIQL----HR--------------LTVHIQSQVYSS 596
+ G VS + M KG Q+ H T H+ + S
Sbjct: 467 SSEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSDKPICSFTGHLDDVLDLS 526
Query: 597 MIQLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVT 710
+ + LSS +D +++WDI Q LK+ H D VT
Sbjct: 527 WSRSQLLLSSSMDKTVRLWDI-ETQSCLKLFAHNDYVT 563
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 178 LEGHQGEIFTGKFHPEGKHLASAG 249
++ HQG I+T KF P+ LASAG
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAG 430
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV--PTGTRIK 428
R+ ++W+ + + M HT I L +SP+ + TG+ D V V++V P +RI
Sbjct: 378 REAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRIT 437
Query: 429 KLKGHANFVNSVS 467
H VN+V+
Sbjct: 438 ARNAHLGGVNAVA 450
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNS 461
GH G+I + +SPD + T + D + VW+V I + +F+ S
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMES 143
Score = 31.5 bits (68), Expect = 0.58
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARR 479
V++ H GA+ + +SPD + +G + VWD T ++ + H +NS++ +
Sbjct: 351 VLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPN 410
Query: 480 GPELLVSASEITP*NYGM-QGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWD 656
+ + + Y + + ++ H+ + I SSG D +++W
Sbjct: 411 NKMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDCTVASSGEDASVRLWH 470
Query: 657 I 659
I
Sbjct: 471 I 471
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL---KGHANFVNSVSGARRGP 485
H+ + + +SPDG+ T ++D ++D TG ++ +L GH + +VS +
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 486 ELLVSASE 509
+L +++
Sbjct: 110 RVLTVSAD 117
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
R+ ++++ + + ++GHT + + F DG + T TD + +W V G I+
Sbjct: 92 RKGYVYDIRKLVDPALTLQGHTKTVSYVRFL-DGGTVVTAGTDGCLKLWSVEDGRVIRTY 150
Query: 435 KGHANFVNSV 464
+GH N N V
Sbjct: 151 EGHVNNRNFV 160
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 410
I +W++ + V GH GA+ L S DG+ L + TD TV +W+VP
Sbjct: 81 IRLWDISSR-RTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVP 129
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 401
V K H A+M + FSP G TG+ D +V ++
Sbjct: 274 VHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIF 306
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 606 LKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
LK S+ +D I++WDI + + + GH V GL
Sbjct: 69 LKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGL 105
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/74 (18%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 473
V M GH + + +P+ +++ + D + +WD+ + + + GH V ++ +
Sbjct: 49 VGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTAS 108
Query: 474 RRGPELLVSASEIT 515
G L+ ++ T
Sbjct: 109 TDGNVLVSCGTDCT 122
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 38.3 bits (85), Expect = 0.005
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Frame = +3
Query: 345 SPDGS-HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP* 521
+P GS + T D TV ++D + + H + VN++S + G +L+ +
Sbjct: 244 APSGSLRVMTANNDCTVRLFDATNFALLNRFAFHWS-VNNISTSPDG-KLVAVLGDSPEC 301
Query: 522 NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSG-VDNVIKMWDIRNNQISLKI-KGH 695
G G +H L H+ S+ + L++G D ++WD+RN SLK+ KG+
Sbjct: 302 LLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGN 361
Query: 696 TDTVTGL 716
+ L
Sbjct: 362 MGAIRAL 368
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 416
+W+V +++ V+KG+ GAI L F+ DG L + V ++D G
Sbjct: 345 LWDVRNLSQSLKVLKGNMGAIRALRFTSDGRFLAMAEPADFVHLFDTEAG 394
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNSV 464
++GH + P+G L TG D T +WDV +K LKG+ + ++
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRAL 368
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 38.3 bits (85), Expect = 0.005
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 1/151 (0%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
+W + G + + GH ++ L FS DG L +G D V ++D +GT L G
Sbjct: 97 LWKI-GNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPG 155
Query: 447 NFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSS 626
+ V RG +L + + + + K L+ + H + K + +
Sbjct: 156 AGIEWVRWHPRGHIVLAGSEDCSLWMWNAD-KEAYLNMFSGHNLNVTCGDFTPDGKLICT 214
Query: 627 GVDNV-IKMWDIRNNQISLKIKGHTDTVTGL 716
G D+ + +W+ + + +KGH GL
Sbjct: 215 GSDDASLIVWNPKTCESIHIVKGHPYHTEGL 245
Score = 35.9 bits (79), Expect = 0.027
Identities = 20/84 (23%), Positives = 39/84 (46%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
++++IW++ Q + H + L + +L TG + TV++WD G +
Sbjct: 309 KKLIIWDL--QHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTY 366
Query: 435 KGHANFVNSVSGARRGPELLVSAS 506
GH + V ++S + +VS S
Sbjct: 367 HGHQDAVQAIS-VSTNTDFIVSVS 389
Score = 35.1 bits (77), Expect = 0.047
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
++V GH G + L SP D + + TG D+ +W + G +L GH + V+ ++
Sbjct: 61 DSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLA 120
Query: 468 GARRGPELLVS 500
+ G +LL S
Sbjct: 121 FSYDG-QLLAS 130
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
+TG I L +S G H+YTG+ DNT+ W + G+ + + GH + V+++
Sbjct: 586 YTG-IHALAYSEYG-HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTL 633
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
IW+ E+V V+KG+ GA+ + F+ DG ++ + V ++D +G K +
Sbjct: 345 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG---YKKEQEI 401
Query: 447 NFVNSVSGARRGPE 488
+F +SG P+
Sbjct: 402 DFFGEISGISFSPD 415
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIKKLKGHANFVNSV 464
+ + +KGH + P+G TG D T +WD + LKG+ V S+
Sbjct: 310 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSI 368
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
IW+ E+V V+KG+ GA+ + F+ DG ++ + V ++D +G K +
Sbjct: 339 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG---YKKEQEI 395
Query: 447 NFVNSVSGARRGPE 488
+F +SG P+
Sbjct: 396 DFFGEISGISFSPD 409
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-PTGTRIKKLKGHANFVNSV 464
+ + +KGH + P+G TG D T +WD + LKG+ V S+
Sbjct: 304 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSI 362
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
+W++ ++V V++G+ GAI + ++ DG ++ + V V+DV G ++
Sbjct: 343 VWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ---EI 399
Query: 447 NFVNSVSGARRGPE 488
+F +SG P+
Sbjct: 400 DFFGEISGISFSPD 413
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHANFVNSV 464
+ + + GH + PDG TG D T VWD+ ++ + L+G+ + S+
Sbjct: 308 KTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSI 366
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 37.5 bits (83), Expect = 0.009
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 21/156 (13%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL----KGHANFVNSVSGA 473
++ H G+I + FS DG +L + D + +W V R +L K +N A
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFLLA 418
Query: 474 RRGPELLVSASEITP*NYGMQGKGIQLHRLTV-----------------HIQSQVYSSMI 602
PE VS S K + L + V H+ + S
Sbjct: 419 NGSPEP-VSMSPKRRGRTSFSRKSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSWS 477
Query: 603 QLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVT 710
+ + LSS +D +++WD+ +++ LK+ H+D VT
Sbjct: 478 KSQHLLSSSMDKTVRLWDL-SSKTCLKVFSHSDYVT 512
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 276 VYGQCEN-VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF 452
V+G E V GH ++ L +S HL + + D TV +WD+ + T + K+ H+++
Sbjct: 453 VFGLSEKPVCSFVGHLDDVLDLSWSKS-QHLLSSSMDKTVRLWDLSSKTCL-KVFSHSDY 510
Query: 453 VNSV 464
V +
Sbjct: 511 VTCI 514
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 178 LEGHQGEIFTGKFHPEGKHLASAG 249
++ H+G I++ KF +G++LASAG
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAG 382
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 494
H AI + + S L T + D T+ VWDV L GH V S+ +LL
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 495 VSAS 506
VS S
Sbjct: 187 VSGS 190
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 618 LSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
L++ D IK+WD+ N+ + + GHT TV +
Sbjct: 144 LTASGDQTIKVWDVEENKCTGVLIGHTGTVKSM 176
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
+K + GA++ +S DG +L TG D+ V VW + + +GH ++V+ V+
Sbjct: 341 VKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
Score = 28.3 bits (60), Expect(2) = 0.019
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 321 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 500
GAI + FS DG++L T D + ++D T + +K + + + + G LL
Sbjct: 304 GAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTG 363
Query: 501 ASE 509
+
Sbjct: 364 GED 366
Score = 27.1 bits (57), Expect(2) = 0.019
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +3
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
K L+ G D+++++W + + ++ +GH V+G+
Sbjct: 358 KYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGV 393
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDVPTG-TRIKKLKGHANFVNSVSGARRGP 485
GHT ++ L +SP +++ + D +VAVWD+ G + K H VN +S R
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLAS 326
Query: 486 ELLVSASE 509
+L S S+
Sbjct: 327 CMLASGSD 334
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 294 NVMVMKGHTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
N + + H G + L FS L T D T+ VWD TG ++ +GH V SV
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
Score = 32.7 bits (71), Expect = 0.25
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Frame = +3
Query: 255 RQILIWNVYGQCENVM--VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 428
R +W++ N+ + +T A+ ++ +SPDG L + + V ++ G ++
Sbjct: 396 RSFKVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLR 455
Query: 429 ---KLKGHANFVNSVSGARRGPEL-LVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSS 596
++ HA VN ++ ++ +L +V+ E G +LH H ++ VYS
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGH-EAPVYSV 514
Query: 597 MIQLKK----FLSSGVDNVIKMW 653
K+ S+ VD IK W
Sbjct: 515 CPHQKENIQFIFSTAVDGKIKAW 537
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +3
Query: 633 DNVIKMWDIRNNQISLKIKGHTDTVTGL 716
D+ I+++++R +++ K+KGH VTGL
Sbjct: 908 DSSIQIYNVRVDEVKSKLKGHQKRVTGL 935
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 294 NVMVMKGHTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
N + + H G + L FS L T D T+ VWD TG ++ +GH V SV
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
Score = 32.7 bits (71), Expect = 0.25
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Frame = +3
Query: 255 RQILIWNVYGQCENVM--VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIK 428
R +W++ N+ + +T A+ ++ +SPDG L + + V ++ G ++
Sbjct: 396 RSFKVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLR 455
Query: 429 ---KLKGHANFVNSVSGARRGPEL-LVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSS 596
++ HA VN ++ ++ +L +V+ E G +LH H ++ VYS
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGH-EAPVYSV 514
Query: 597 MIQLKK----FLSSGVDNVIKMW 653
K+ S+ VD IK W
Sbjct: 515 CPHQKENIQFIFSTAVDGKIKAW 537
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +3
Query: 633 DNVIKMWDIRNNQISLKIKGHTDTVTGL 716
D+ I+++++R +++ K+KGH VTGL
Sbjct: 908 DSSIQIYNVRVDEVKSKLKGHQKRVTGL 935
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+I +WN Y + + GH I + F + + + + D T+ +W+ + T I L
Sbjct: 74 KIKVWN-YKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLT 132
Query: 438 GHANFVNSVSGARRGPELLVSAS 506
GH ++V S + +L+VSAS
Sbjct: 133 GHNHYVMCASFHPK-EDLVVSAS 154
Score = 35.1 bits (77), Expect = 0.047
Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 494
H G + + F +G D + VW+ T + L GH +++ +V P ++
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 495 VSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKF-LSSGVDNVIKMWDI 659
++ + T + Q + + LT H + +S + +S+ +D +++WDI
Sbjct: 110 SASDDQTIRIWNWQSRTC-ISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSVSGAR 476
V++GH + F P + +GA D V +W + + L+GH N V+SV
Sbjct: 199 VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 477 RGPELLVSASE 509
+ +++VS SE
Sbjct: 259 K-QDIIVSNSE 268
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
I IWN + + V+ GH +M F P + + + D TV VWD+
Sbjct: 117 IRIWNWQSRT-CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 255 RQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
RQ+ +W + + V ++GH + + F + + + D ++ VWD T I+
Sbjct: 226 RQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQT 285
Query: 432 LK 437
+
Sbjct: 286 FR 287
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG----TRIKKLKGHANFVNSVS 467
+K H A+ + S +G+ +YTG+ D + VW PTG T + L+ H + VN+++
Sbjct: 231 IKAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALA 287
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +3
Query: 255 RQILIW-NVYGQCENVMV--MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
R+I +W G+ + +V ++ H A+ L + DGS L++G+ D ++ VW+
Sbjct: 256 RRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 308
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
H+G + CF G LY+G+ D T+ VWD+ T LK H V S+
Sbjct: 311 HSGEVT--CFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSL 358
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 552 LHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
L L H +V ++ + S VD IK+WD+ Q + +K H TVT L
Sbjct: 304 LTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSL 358
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/66 (19%), Positives = 29/66 (43%)
Frame = +3
Query: 270 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN 449
W+ + V ++GH I + L++ + D T+ +WD +G ++ + A
Sbjct: 171 WSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAE 230
Query: 450 FVNSVS 467
+ +S
Sbjct: 231 AGSLIS 236
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
++ H GAI+ + FSPDG +L + D + VW V R ++
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEE 288
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +1
Query: 91 EISVVGTREKAVVTSSVPRTSNLYAPIML---LEGHQGEIFTGKFHPEGKHLASAG 249
E++V G+R + V + + + + ++ H+G I KF P+G++LASAG
Sbjct: 215 EVAVCGSRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAG 270
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 476 KRSRTLSFSFRDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIFI 622
K +R LS S DN+++LW + + F + VTSV FN + FI
Sbjct: 366 KNNRLLSASV-DNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDHFI 413
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
++ H GAI+ + FSPDG +L + D + VW V R ++
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEE 288
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +1
Query: 91 EISVVGTREKAVVTSSVPRTSNLYAPIML---LEGHQGEIFTGKFHPEGKHLASAG 249
E++V G+R + V + + + + ++ H+G I KF P+G++LASAG
Sbjct: 215 EVAVCGSRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAG 270
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 476 KRSRTLSFSFRDNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIFI 622
K +R LS S DN+++LW + + F + VTSV FN + FI
Sbjct: 366 KNNRLLSASV-DNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDHFI 413
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 327 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 443
+ LC+ PDG + G D T+++ DV G ++ LK H
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPH 105
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 36.7 bits (81), Expect = 0.015
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 19/154 (12%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 485
++ H GA+ + FS D +L +G D + VW+V + +G ++ G
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIHPSLCDSSGN 459
Query: 486 ELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYS-------------------SMIQL 608
E+ V E G G+ VH+ V+S S +
Sbjct: 460 EITV--VEKKKKGKGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGHLDAILDLSWSKS 517
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVT 710
+ LSS +D +++WDI + LK+ H D VT
Sbjct: 518 QLLLSSSMDKTVRLWDI-ETKTCLKLFAHNDYVT 550
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 36.3 bits (80), Expect = 0.020
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Frame = +3
Query: 294 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS-- 467
+++ + GH G+I ++ +S DGS + + + D + +W++ + +++ G F +SV
Sbjct: 227 HMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDS----QEVVGPVLFGHSVRVW 282
Query: 468 GARRGPELLVSASE-ITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFL--SSGVDN 638
L+V+A E T +G+ G QL + HI ++ + L ++G D+
Sbjct: 283 DCCISDSLIVTAGEDCTCRVWGVD--GTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDS 340
Query: 639 VIKMWDIRN 665
IK+ + N
Sbjct: 341 AIKVHQLHN 349
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 36.3 bits (80), Expect = 0.020
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Frame = +3
Query: 294 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS-- 467
+++ + GH G+I ++ +S DGS + + + D + +W++ + +++ G F +SV
Sbjct: 227 HMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDS----QEVVGPVLFGHSVRVW 282
Query: 468 GARRGPELLVSASE-ITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFL--SSGVDN 638
L+V+A E T +G+ G QL + HI ++ + L ++G D+
Sbjct: 283 DCCISDSLIVTAGEDCTCRVWGVD--GTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDS 340
Query: 639 VIKMWDIRN 665
IK+ + N
Sbjct: 341 AIKVHQLHN 349
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 36.3 bits (80), Expect = 0.020
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ IW+V + + V MK H + + S D + L +G+ D T G I +K
Sbjct: 608 VQIWDV-ARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT--------GVSIGTIK 658
Query: 438 GHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKF 617
AN + G L +++ Y ++ I L + H ++ Y +
Sbjct: 659 TKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFVDSSTL 718
Query: 618 LSSGVDNVIKMWDI 659
+SS DN +K+WD+
Sbjct: 719 VSSSTDNTLKLWDL 732
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 36.3 bits (80), Expect = 0.020
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
Frame = +3
Query: 327 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV---SGARRGPELLV 497
+ Q+ D + + + NTV ++ TG + KGH++ VN + S + P +L
Sbjct: 44 VFQIVPKIDWTAIAVSLSTNTVKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLH 103
Query: 498 SASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMI--QLKKFLSSGVDNVIKMWDIRNN- 668
S S Q+ R+ +++S L+ G + +WD RN+
Sbjct: 104 SCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSK 163
Query: 669 QISLKIKGHTDTVT 710
Q++ + H D VT
Sbjct: 164 QVACLEESHMDDVT 177
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 416
+W++ E+ V+KG+ GAI L F+P+G L + V ++D +G
Sbjct: 316 LWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSG 365
Score = 31.1 bits (67), Expect = 0.76
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Frame = +3
Query: 348 PDGS-HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP*N 524
P GS L T D + V+D + TR+ + + VN+ S + G +LL + T
Sbjct: 216 PSGSLRLITANNDCKIRVFDAQSFTRVSEFALDWS-VNNTSVSPDG-KLLAVVGDSTECL 273
Query: 525 YGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSG-VDNVIKMWDIRNNQISLKI-KGHT 698
G + L H S+ L++G D ++WDIRN S + KG+
Sbjct: 274 ISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNM 333
Query: 699 DTVTGL 716
+ GL
Sbjct: 334 GAIRGL 339
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
Q+ +W Y + + GHT ++ + SPDG + + A D T+ +W+V
Sbjct: 353 QLTLWK-YPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 3/135 (2%)
Frame = +3
Query: 261 ILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ +W+ ++ + G + + ++ DG L G ++ V VWD + ++ L+
Sbjct: 132 VYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLR 191
Query: 438 -GHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL-K 611
GH + V S+ A L + N ++ + + H + + K
Sbjct: 192 GGHESRVGSL--AWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGK 249
Query: 612 KFLSSGVDNVIKMWD 656
K S G DNV+ +WD
Sbjct: 250 KLASGGNDNVVHIWD 264
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 258 QILIWNVY-GQCENVMVMKGHTGA-IMQLCFSPDGSHLYT--GATDNTVAVWDVPTGTRI 425
+I WN + G C N + TG+ + L +S L + G T N + +W P+ ++
Sbjct: 310 KINFWNTHTGACLNSV----ETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKM 365
Query: 426 KKLKGHANFVNSVSGARRGPELLVSASEIT 515
+L GH + V ++ + G + +A + T
Sbjct: 366 AELNGHTSRVLFMAQSPDGCTVASAAGDET 395
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
Q+ +W Y + + GHT ++ + SPDG + + A D T+ +W+V
Sbjct: 336 QLTLWK-YPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
Score = 34.3 bits (75), Expect = 0.082
Identities = 29/138 (21%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Frame = +3
Query: 261 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ +W+ G ++ + G + + ++ DG L G ++ V +WD + +++ L+
Sbjct: 114 VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLR 173
Query: 438 -GHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL-K 611
GH + V S+ A L + N ++ + + H + + K
Sbjct: 174 GGHESRVGSL--AWNNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGK 231
Query: 612 KFLSSGVDNVIKMWDIRN 665
K S G DNV+ +WD R+
Sbjct: 232 KLASGGNDNVVHIWDHRS 249
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +3
Query: 258 QILIWNVY-GQCENVMVMKGHTGA-IMQLCFSPDGSHLYT--GATDNTVAVWDVPTGTRI 425
+I WN + G C N + TG+ + L +S L + G T N + +W P+ ++
Sbjct: 293 KIKFWNTHTGACLNSV----ETGSQVCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKM 348
Query: 426 KKLKGHANFVNSVSGARRGPELLVSASEIT 515
+L GH + V ++ + G + +A + T
Sbjct: 349 AELNGHTSRVLFMAQSPDGCTVASAAGDET 378
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 35.9 bits (79), Expect = 0.027
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 261 ILIW--NVYGQC-ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
IL+W N C + + GHT A++ L + LY+GA DN++ VW + I+
Sbjct: 245 ILVWRYNSTTSCFDPAASLLGHTLAVVSLYVG--ANRLYSGAMDNSIKVWSLDNLQCIQT 302
Query: 432 LKGHANFVNSV 464
L H + V S+
Sbjct: 303 LTEHTSVVMSL 313
Score = 33.9 bits (74), Expect = 0.11
Identities = 38/156 (24%), Positives = 58/156 (37%), Gaps = 4/156 (2%)
Frame = +3
Query: 261 ILIWN-VYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ IW+ GQC V+ + G G C +G L G N V W++ + L
Sbjct: 168 VRIWDCASGQCTGVLNLGGEVG-----CIISEGPWLLVGMP-NLVKAWNIQNNADLS-LN 220
Query: 438 GHANFVNSVSGARRGPELLVSASE---ITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQL 608
G V S+ G +LL + ++ I Y + V S +
Sbjct: 221 GPVGQVYSLVV---GTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGA 277
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
+ S +DN IK+W + N Q + HT V L
Sbjct: 278 NRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSL 313
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIK 428
R + W+ + + GH + + LYT + D TV +WD +G T +
Sbjct: 123 RYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVL 182
Query: 429 KLKGHANFVNSVSGARRGPELLV 497
L G + S GP LLV
Sbjct: 183 NLGGEVGCIIS-----EGPWLLV 200
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
K + GA++ +S DG ++ TG D+ V VW + + +GH ++V+ V+
Sbjct: 342 KSYYGALLCCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 394
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +3
Query: 267 IWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR---IKKL 434
IW YG + E + ++GH + + ++ GS L T + D +V +W+V G L
Sbjct: 100 IWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVL 159
Query: 435 KGHANFVNSV 464
GH V V
Sbjct: 160 TGHTQDVKMV 169
Score = 35.5 bits (78), Expect = 0.035
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 6/128 (4%)
Frame = +3
Query: 288 CENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR---IKKLKGHANFVN 458
C+ V+ + HT + +SP G L T + D T +W G+ I L+GH N V
Sbjct: 65 CKTVLE-ETHTRTVRSCAWSPSGQLLATASFDGTTGIWK-NYGSEFECISTLEGHENEVK 122
Query: 459 SVSGARRGPELLVSASEITP*NYG-MQGKGIQLHR-LTVHIQS-QVYSSMIQLKKFLSSG 629
SVS G L + + + + ++G LT H Q ++ + S
Sbjct: 123 SVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCS 182
Query: 630 VDNVIKMW 653
DN IK+W
Sbjct: 183 YDNTIKVW 190
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 35.9 bits (79), Expect = 0.027
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR 422
H+ + L FS DG++LY+G + + VW + TG +
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGKK 317
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 443
FS D L T NTV+V+ TG +I L+GH
Sbjct: 15 FSNDAKKLLV-CTGNTVSVFSAATGLQITSLEGH 47
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 35.9 bits (79), Expect = 0.027
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+I +WN Y + + GH I + F + + + + D T+ +W+ + T + L
Sbjct: 74 KIKVWN-YKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLT 132
Query: 438 GHANFVNSVSGARRGPELLVSAS 506
GH ++V S + +L+VSAS
Sbjct: 133 GHNHYVMCASFHPK-EDLVVSAS 154
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSVSGAR 476
V++GH + F P + +GA D V +W + + L+GH N V+SV
Sbjct: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 477 RGPELLVSASE 509
+ +++VS SE
Sbjct: 259 K-QDIIVSNSE 268
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
I IWN + V V+ GH +M F P + + + D TV VWD+
Sbjct: 117 IRIWNWQSRT-CVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 31.5 bits (68), Expect = 0.58
Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 494
H G + + F +G D + VW+ + L GH +++ +V P ++
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
Query: 495 VSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKF-LSSGVDNVIKMWDI 659
++ + T + Q + + LT H + +S + +S+ +D +++WDI
Sbjct: 110 SASDDQTIRIWNWQSRTC-VSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 615 FLSSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
F+S G D IK+W+ +N++ + GH D +
Sbjct: 66 FVSGGDDYKIKVWNYKNHRCLFTLLGHLDYI 96
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/62 (19%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 255 RQILIWNVYG-QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
RQ+ +W + + V ++GH + + F + + + D ++ VWD T ++
Sbjct: 226 RQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQT 285
Query: 432 LK 437
+
Sbjct: 286 FR 287
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 35.5 bits (78), Expect = 0.035
Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 6/143 (4%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG--TRIKKLKGHANFVNSVSGARR 479
+ GH + + LYTG+ D T+ VWD +G T + KL G V S
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLS-----E 201
Query: 480 GPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMW-- 653
GP LLV + + ++ Q V QVYS ++ + D I W
Sbjct: 202 GPWLLVGMPNLVK-AWNIETNADQSLSGPV---GQVYSLVVGTDLLFAGTQDGSILAWRY 257
Query: 654 DIRNN--QISLKIKGHTDTVTGL 716
+ N + S + GHT V L
Sbjct: 258 NAATNCFEPSASLTGHTLAVVTL 280
Score = 34.3 bits (75), Expect = 0.082
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 261 ILIW--NVYGQC-ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK 431
IL W N C E + GHT A++ L + LY+G+ D T+ VW + I+
Sbjct: 252 ILAWRYNAATNCFEPSASLTGHTLAVVTLYVG--ANRLYSGSMDKTIKVWSLDNLQCIQT 309
Query: 432 LKGHANFVNSV 464
L H++ V S+
Sbjct: 310 LTDHSSVVMSL 320
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 35.5 bits (78), Expect = 0.035
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 321 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH--ANFVNSVSGARRGPELL 494
G I + F+ GS L G D +WD T K+++ + + + SVS ++ G LL
Sbjct: 24 GVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLL 83
Query: 495 VSASE 509
VSA++
Sbjct: 84 VSAAD 88
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 35.5 bits (78), Expect = 0.035
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
GH G+I + +SPDG + T + D + +WD+
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 234 FGFCRL*RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV-- 407
F L R+ ++W+ + + M H+ I L +SP+ + + TG+ D V V++V
Sbjct: 506 FASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDK 565
Query: 408 PTGTRIKKLKG 440
P +R+ +KG
Sbjct: 566 PASSRM-TIKG 575
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD-VPTGTRIKKLKGHANFVNSVS 467
V++ H GAI + +SPD S + + VWD V ++K + H+ +N ++
Sbjct: 486 VLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLA 541
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK---GHANFVNSVSGARRGP 485
H+ + + F+PDGS T ++D ++D T + +L GH + +VS + G
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGK 245
Query: 486 ELLVSASE 509
++L +++
Sbjct: 246 QVLTVSAD 253
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 35.5 bits (78), Expect = 0.035
Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Frame = +3
Query: 300 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL--KGHANFVNSVSGA 473
M KGH+ + + S + TG+ D T +WD TG +K + + + + S A
Sbjct: 195 MTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMA 254
Query: 474 RRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMW 653
G E + + N + T+ I + V M K+ L+ G + +++ +
Sbjct: 255 LDGSESWLVCGQGK--NLALWNLPASECVQTIPIPAHVQDVMFDEKQILTVGAEPLLRRF 312
Query: 654 DIRNNQIS 677
D+ +S
Sbjct: 313 DLNGALLS 320
Score = 34.7 bits (76), Expect = 0.062
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +3
Query: 327 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 506
I + P ++T A D+ WDV +G KGH++++++V ++L +
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 507 EIT 515
+ T
Sbjct: 222 DGT 224
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/65 (20%), Positives = 35/65 (53%)
Frame = +3
Query: 321 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 500
G ++ F+PDG ++ +G+ D T+ W++ + + + + + V+ + A R + +
Sbjct: 245 GTPIEATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAA 304
Query: 501 ASEIT 515
++ +T
Sbjct: 305 STVLT 309
Score = 34.3 bits (75), Expect = 0.082
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
KGH ++ LC SP +G+ D +V +WD+
Sbjct: 111 KGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDL 143
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 321 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 413
G++ L FS DG HL + D V VWD+ T
Sbjct: 375 GSVRSLAFSEDGKHLLSSGGDGQVYVWDLRT 405
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 34.7 bits (76), Expect = 0.062
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 488
K T + LC SPDG L T +T + ++ +I+K GH V V+ G
Sbjct: 155 KASTKTVSSLCVSPDGKILVTASTQ--LKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKY 212
Query: 489 LLVSA 503
+L SA
Sbjct: 213 VLSSA 217
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 494
H G + + S S +Y+G D V D +G I+K K V+S+ + G ++L
Sbjct: 115 HPGGVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDG-KIL 173
Query: 495 VSAS 506
V+AS
Sbjct: 174 VTAS 177
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 485
++ H G + + F+ +G L +G+ D V +WD G KL H+ N+V A+ P
Sbjct: 55 LEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGN--VKLSFHSGHANNVFQAKFMP 112
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 34.7 bits (76), Expect = 0.062
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGA-TDNTVAVWDVPTGTRI 425
E + V+ G G + + FS DG++LYTG D + WD+ I
Sbjct: 246 ELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKSVEI 291
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
H AI L S D LY+G+ D T VW V ++ + H + VN+V
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAV 259
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 270 WNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG----TRIKKLK 437
W +N V+KGH A+ LC G+ +++G+ D + VW P G + L
Sbjct: 327 WERENNMKNGGVLKGHKLAV--LCLVAAGNLMFSGSADLGIRVWRRPEGGGEHVCLSVLT 384
Query: 438 GHANFVNSVSGAR 476
GHA V ++ R
Sbjct: 385 GHAGPVKCLAVER 397
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 351 DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 506
D HL +G D V WDV T I L GH ++V + +LV+ S
Sbjct: 147 DKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGS 198
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 618 LSSGVDNVIKMWDIRNNQISLKIKGHTDTV 707
+S G D V+K WD+ + + GH D V
Sbjct: 152 VSGGDDGVVKYWDVAGATVISDLLGHKDYV 181
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 509 DNTIKLWDAR--KRNPVASFDSSYPVTSVLF 595
D+T+K+WDAR N +A + PV V++
Sbjct: 200 DHTVKVWDARVHTSNWIAEINHGLPVEDVVY 230
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.7 bits (76), Expect = 0.062
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 300 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 419
++++GH ++ CF+ + LYT +D + VW P GT
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS-PGGT 431
Score = 33.9 bits (74), Expect = 0.11
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 5/122 (4%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHAN-FVNSVSGARRGP 485
GH AI + P + L+ TG+ D+ + VWD T + K + ++S
Sbjct: 101 GHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSH 160
Query: 486 ELLVSASEITP*NYGMQGKGIQLHRLTVH---IQSQVYSSMIQLKKFLSSGVDNVIKMWD 656
L+ + +E G H L+ H + S +S+ + + + G D I+ WD
Sbjct: 161 TLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLY-TGGCDGAIRFWD 219
Query: 657 IR 662
IR
Sbjct: 220 IR 221
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTG 416
H GA+ L + DG +L + +D+ + +WD+ +G
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESG 344
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDV 407
+ GH +M + +S LYTG D + WD+
Sbjct: 186 LSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 34.3 bits (75), Expect = 0.082
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 285 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNS 461
+ E V+ G + L F+ DG+ L TGA D T+ V++ P+ T + + K HA+ V S
Sbjct: 131 ESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKS 189
Query: 462 VSGARRGPELLVS 500
++ + G + LVS
Sbjct: 190 LTFSESG-KFLVS 201
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 34.3 bits (75), Expect = 0.082
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 285 QCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHANFVNS 461
+ E V+ G + L F+ DG+ L TGA D T+ V++ P+ T + + K HA+ V S
Sbjct: 131 ESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKS 189
Query: 462 VSGARRGPELLVS 500
++ + G + LVS
Sbjct: 190 LTFSESG-KFLVS 201
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 34.3 bits (75), Expect = 0.082
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW--DVPTGTRIKKLKGHANFVNSVS 467
++KGH A+ LC GS +++G+ D T+ VW D T + L GH V ++
Sbjct: 333 ILKGHKLAV--LCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLA 387
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
H A+ L + + LY+ + D T+ VW + ++ + H + VNSV
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV 254
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 34.3 bits (75), Expect = 0.082
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 261 ILIWNV---YGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
I IW++ +G ++ V K HT I + FS DG L + + D ++ VWD+
Sbjct: 351 IQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDL 402
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 34.3 bits (75), Expect = 0.082
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 273 NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPT-GTRIKKLKGHAN 449
N G+ E V+ G + L F+P+GS L GA D T+ V+ P+ T + + + H++
Sbjct: 138 NQAGESEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSS 197
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 34.3 bits (75), Expect = 0.082
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
+NV+ ++ H A+ L + D LY+G+ D T+ VW + ++ ++ H + VN+V
Sbjct: 237 KNVLKIR-HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV 293
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
+K H GAI+ + FS DG L + D V VW V
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV 250
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +3
Query: 318 TGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGA 473
T ++ + DG H+ + D+ V +W + KK++ F + S A
Sbjct: 503 TRSLTSASLTSDGKHIVSACEDSNVYIWSNDEESETKKIRSFERFSANASVA 554
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 509 DNTIKLWDARKRNPVASFDSSYPVTSVLFNDTAEKIFI 622
D T++LW + + F + VTSV FN E F+
Sbjct: 348 DKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPVNENYFM 385
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 369 TGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 506
+G+ D V VWDV TG ++ H V++V+ PE+L+S S
Sbjct: 232 SGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGS 277
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 33.9 bits (74), Expect = 0.11
Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Frame = +3
Query: 363 LYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV-SASEITP*NYGMQG 539
L +G+ D +V +W++ + ++ AN V V + + LL +S+ Y ++
Sbjct: 812 LASGSDDCSVKLWNINERNCLGTIRNIAN-VCCVQFSPQSSHLLAFGSSDFRTYCYDLRN 870
Query: 540 KGIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDIR--------NNQISLKIKGH 695
L+ H ++ Y+ + + +++ DN +K+WD++ N SL GH
Sbjct: 871 LRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGH 930
Query: 696 TD 701
T+
Sbjct: 931 TN 932
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 419
++ GH A+ F D L T +TDNT+ +WD+ T
Sbjct: 877 ILSGHNKAVSYAKFL-DNETLVTASTDNTLKLWDLKKTT 914
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
GH + L SPD + L TG+ D+TV +W +
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
H G + + FS L T D T+ VWD TG + +GH V SV
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 31.5 bits (68), Expect = 0.58
Identities = 10/28 (35%), Positives = 22/28 (78%)
Frame = +3
Query: 633 DNVIKMWDIRNNQISLKIKGHTDTVTGL 716
D+ I+++++R +++ K+KGH+ +TGL
Sbjct: 898 DSTIQIYNVRVDEVKSKLKGHSKRITGL 925
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHL--YTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
H G + + FS L T D T+ VWD TG + +GH V SV
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 31.5 bits (68), Expect = 0.58
Identities = 10/28 (35%), Positives = 22/28 (78%)
Frame = +3
Query: 633 DNVIKMWDIRNNQISLKIKGHTDTVTGL 716
D+ I+++++R +++ K+KGH+ +TGL
Sbjct: 898 DSTIQIYNVRVDEVKSKLKGHSKRITGL 925
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
H G+I+ + FSPDG ++ + D V VW +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 187 HQGEIFTGKFHPEGKHLASAG 249
H G I KF P+GK++ASAG
Sbjct: 217 HDGSILAMKFSPDGKYIASAG 237
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
H G+I+ + FSPDG ++ + D V VW +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 187 HQGEIFTGKFHPEGKHLASAG 249
H G I KF P+GK++ASAG
Sbjct: 217 HDGSILAMKFSPDGKYIASAG 237
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV----PTGTRI 425
Q+ +W Y + + GHT ++ + SP+G + + A D + +W+V P T+
Sbjct: 367 QLTLWK-YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPKTTKK 425
Query: 426 KKLKGHANFVNSVSGAR 476
K + + V+ R
Sbjct: 426 AASKNYLELFSHVNSLR 442
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 258 QILIWNVY-GQCENVMVMKGHTGA-IMQLCFSPDGSHLYT--GATDNTVAVWDVPTGTRI 425
+I WN + G C N + TG+ + L +S L + G T N + +W P+ +++
Sbjct: 324 KIKFWNTHTGACLNSV----ETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKM 379
Query: 426 KKLKGHANFVNSVSGARRGPELLVSASE 509
+L GH + V ++ + G + +A +
Sbjct: 380 AELNGHTSRVLFMAQSPNGCTVASAAGD 407
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
GHT + L +S G L +G N V +WD
Sbjct: 247 GHTEEVCGLKWSESGKKLASGGNYNVVHIWD 277
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 267 IW-NVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
+W N E+V V++GH + + ++ GS L T D +V +W++
Sbjct: 74 VWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEI 121
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/102 (19%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Frame = +3
Query: 243 CRL*RQILIWNVY----GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW--- 401
C + + IW + + + + V+ GH+ + + + P L++ + DNT+ +W
Sbjct: 110 CGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSE 169
Query: 402 ----DVPTGTRIKKL-KGHANFVNSVSGARRGPELLVSASEI 512
D + +L GH++ V S+S G +++ + ++
Sbjct: 170 DEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDL 211
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 33.1 bits (72), Expect = 0.19
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHA 446
IW+V Q + +G G I L +SP G + + D T +W+ T T + +
Sbjct: 239 IWDV-SQGAGTPIRRG-LGGISMLKWSPTGDYFFAARFDGTFCLWE--TNTWTSEPWSLS 294
Query: 447 NFVNSVSGARRGPE---LLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKF 617
+ SV+GA PE +L+S S+ + G + L H+ ++L +
Sbjct: 295 SGSGSVTGAIWDPEGRFILISFSKSS--TLGSVHFSSKPPSLDAHLLP------VELPEI 346
Query: 618 LS-SGVDNVIKM-WDIRNNQISLKIKGHTDTVTGL 716
S +G + + K+ WD ++++ KG + GL
Sbjct: 347 ASLTGCEGIEKIAWDASGERLAVSYKGGDENYKGL 381
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLY--TGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
H G + + FS L T D T+ VWD TG + +GH V S+
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSI 512
Score = 31.5 bits (68), Expect = 0.58
Identities = 10/28 (35%), Positives = 22/28 (78%)
Frame = +3
Query: 633 DNVIKMWDIRNNQISLKIKGHTDTVTGL 716
D+ I+++++R +++ K+KGH+ +TGL
Sbjct: 887 DSTIQIYNVRVDEVKSKLKGHSKRITGL 914
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLY--TGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
H G + + FS L T D T+ VWD TG + +GH V S+
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSI 512
Score = 31.5 bits (68), Expect = 0.58
Identities = 10/28 (35%), Positives = 22/28 (78%)
Frame = +3
Query: 633 DNVIKMWDIRNNQISLKIKGHTDTVTGL 716
D+ I+++++R +++ K+KGH+ +TGL
Sbjct: 887 DSTIQIYNVRVDEVKSKLKGHSKRITGL 914
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKK--LKGHANFV 455
E + KGH G + + ++P G +G+ D TV +W V + ++ L GH V
Sbjct: 256 EEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGHVKLV 312
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/136 (19%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Frame = +3
Query: 300 MVMKGHTGAIMQLCFSP---DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSG 470
+V GH+ ++ + +SP DG L + + D+ + + TG I +GH V S S
Sbjct: 5 LVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSL 64
Query: 471 ARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKM 650
+ ++++ T + G +LH + + + L+ G++ ++++
Sbjct: 65 DKNAIRAASASADFTAKIWNAL-TGDELHSFEHKHIVRACAFSEDTHRLLTGGMEKILRI 123
Query: 651 WDIRNNQISLKIKGHT 698
+D+ K G++
Sbjct: 124 FDLNRPDAPPKEVGNS 139
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
Q+ +W Y + + GHT ++ + SP+G + + A D + +W+V
Sbjct: 369 QLTLWK-YPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/71 (21%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 261 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ +W+ G ++ + G + + ++ DG L G ++ V +WD + +++ L+
Sbjct: 148 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLR 207
Query: 438 -GHANFVNSVS 467
GH + V S++
Sbjct: 208 GGHESRVGSLA 218
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
GHT + L +S G+ +G DN V +WD
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWD 280
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 258 QILIWNVY-GQCENVMVMKGHTGA-IMQLCFSPDGSHLYT--GATDNTVAVWDVPTGTRI 425
+I WN + G C N + TG+ + L +S L + G T N + +W P+ +++
Sbjct: 326 KIKFWNTHTGACLNSV----ETGSQVCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSKM 381
Query: 426 KKLKGHANFVNSVSGARRGPELLVSASE 509
+L GH + V ++ + G + +A +
Sbjct: 382 AELNGHTSRVLFMAQSPNGCTVASAAGD 409
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 32.7 bits (71), Expect = 0.25
Identities = 33/138 (23%), Positives = 53/138 (38%), Gaps = 7/138 (5%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELL 494
H A+ L + LY+ + D T+ VW + ++ + H + +NSV
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVFT 293
Query: 495 VSA-SEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKFLSSGV-----DNVIKMWD 656
SA + +QGKG + H L + Q + K SS V D ++ W+
Sbjct: 294 GSADGTVKVWKRELQGKGTK-HTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWE 352
Query: 657 IRNNQISLKI-KGHTDTV 707
+ I KGH V
Sbjct: 353 RSKRSFTGGILKGHKSAV 370
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 401
++KGH A+ LC G+ L +G+ D + VW
Sbjct: 362 ILKGHKSAV--LCLGIAGNLLLSGSADKNICVW 392
Score = 29.5 bits (63), Expect = 2.3
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 7/156 (4%)
Frame = +3
Query: 270 WNVYGQCENVMVMKGHTGAIMQ-----LCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL 434
W +NV+ G G+I++ + G LYTG+ + VW K L
Sbjct: 102 WGADFNEDNVLETNGLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVW--------KNL 153
Query: 435 KGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHI--QSQVYSSMIQL 608
K HA F +S SG + +++ I G Q I++ +++ + + ++
Sbjct: 154 KEHAGFKSS-SGLIKA--IVIFGDRIFT---GHQDGKIRIWKVSKRKPGKHKRVGTLPTF 207
Query: 609 KKFLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
K + S V N ++R N+ S+K K H D V+ L
Sbjct: 208 KSMVKSSV-NPKHFMEVRRNRNSVKTK-HNDAVSSL 241
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 327 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 506
I L + +G++L G + +W+V TG +KK GH V + + LLVS S
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFS-GDDSLLVSGS 139
Query: 507 E 509
+
Sbjct: 140 Q 140
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 324 AIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGP 485
AI L + DG+ L +G+ D V VWD P R H + G+R+GP
Sbjct: 265 AITCLAYCADGNLLISGSEDGVVCVWD-PKSLR------HVRTLIHAKGSRKGP 311
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 312 GHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
GH ++ L FS D S L +G+ D ++ VW +
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR 422
E+ H+ + L FS DG+ LY+G VW++ TG +
Sbjct: 237 ESCTTFNWHSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGKK 280
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.7 bits (71), Expect = 0.25
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Frame = +3
Query: 360 HLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQG 539
++ G + V DV + T K L GH + VN + P+L+++AS+
Sbjct: 100 YVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVE 159
Query: 540 KGIQL--------HRLTVHIQSQVYSSMIQLKKFLSSGVDNVIKMWDIR 662
GI + HR V + + S + +F S G+D IK+W ++
Sbjct: 160 TGICILIFAGAGGHRYEV-LSVDFHPS--DIYRFASCGMDTTIKIWSMK 205
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMK-GHT---GAIMQLCFSPDGSHLYTGATDNTVAVWDVPT 413
++ +W++ C V++ K H I Q S DGS + D T+ WDV T
Sbjct: 314 KVYVWDLKS-CPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGTIWRWDVIT 368
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/59 (25%), Positives = 34/59 (57%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
+NV+ ++ H A+ L + + LY+G+ D T+ VW + ++ ++ H + +N+V+
Sbjct: 241 KNVLKIR-HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVA 298
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 32.7 bits (71), Expect = 0.25
Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR----------IKKLKGHANFV 455
++ H G+I + FS DG +L + D + +W V + + L + +
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLDRPELLLLATNGSPE 468
Query: 456 NSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTV-----HIQSQVYSSMIQLKKFL 620
+ RR +S ++ N + L H+ + + + + L
Sbjct: 469 PTTMSPRRRGRTSISRKSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLL 528
Query: 621 SSGVDNVIKMWDIRNNQISLKIKGHTDTVT 710
SS +D +++W++ ++Q LK+ H+D VT
Sbjct: 529 SSSMDKTVRLWNL-SSQTCLKVFSHSDYVT 557
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
+GH ++ L +S HL + + D TV +W++ + T + K+ H+++V +
Sbjct: 510 QGHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSSQTCL-KVFSHSDYVTCI 559
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 178 LEGHQGEIFTGKFHPEGKHLASAG 249
++ H G I++ KF +GK+LASAG
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAG 432
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 32.7 bits (71), Expect = 0.25
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Frame = +3
Query: 312 GHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHAN-FVNSVSGARRGP 485
GH AI + P D TG+ D+ V VWD T + K + ++S
Sbjct: 101 GHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSH 160
Query: 486 ELLVSASEITP*NYGMQGKGIQLHRLTVH---IQSQVYSSMIQLKKFLSSGVDNVIKMWD 656
L+ + ++ G H L+ H + S +S+ + + + G D I+ WD
Sbjct: 161 TLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLY-TGGCDGAIRFWD 219
Query: 657 IR 662
IR
Sbjct: 220 IR 221
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 300 MVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT 419
++++GH ++ CF+ + LYT D + VW P G+
Sbjct: 393 LMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS-PGGS 431
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSH-LYTGATDNTVAVWDV 407
+ GH +M + +S LYTG D + WD+
Sbjct: 186 LSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGT-RIKKLKGHAN 449
H G + + F+ DG L +G+ D V +WD T + ++ GH N
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFN 99
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 31.9 bits (69), Expect = 0.44
Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTR-IKKLKGHA-NFVNSVSGARR 479
+ GH G + + F+ G L +G+ D + +W+ +G+R + GH N +
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 480 GPELLVSASEITP*NYG--MQGKGIQLHRLTVHIQSQVYSSMI---QLKKFLSSGVDNVI 644
++++ G ++ ++ RL H +VY + F S G D +
Sbjct: 111 DDRTIITSGADGQVRLGQILENGKVETKRLGRH-HGRVYKLAVLPGDPNVFYSCGEDGFV 169
Query: 645 KMWDIRNNQISL 680
+ +DIR+N ++
Sbjct: 170 QHFDIRSNSATM 181
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSP--DGSHLYTGATDNTVAVWDVPTGTRI- 425
RQI++WN + GH + Q F P D + T D V + + ++
Sbjct: 77 RQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDRTIITSGADGQVRLGQILENGKVE 136
Query: 426 -KKLKGHANFVNSVSGARRGPELLVSASE 509
K+L H V ++ P + S E
Sbjct: 137 TKRLGRHHGRVYKLAVLPGDPNVFYSCGE 165
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 410
E V GH A+ + F PD H+ + A+D + VW +P
Sbjct: 603 ELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVWKLP 642
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVS 467
++ H I ++P G T + D TV +W V RIK++ F +SV+
Sbjct: 692 VEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQILVLPPFGSSVT 745
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
Q+ ++++ Q V+ AI + PDG +Y G +A +D+ TG +
Sbjct: 239 QVRLYDISTQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASFDIRTGKLLGSFL 298
Query: 438 GHANFVNSVSGARRGPELLVSAS 506
G + S+ R P+ V AS
Sbjct: 299 GKCS--GSIRSVVRHPQHQVIAS 319
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 31.9 bits (69), Expect = 0.44
Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPTGTRIKKLKGHANFV-NSVSGARRGPE 488
H + + ++P + T + D+TV +W + ++ K HA V +V + G
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDV 164
Query: 489 LLVSASEITP*NYGMQGKG----IQLHRLTV-HIQSQVYSSMIQLKKFLSSGVDNVIKMW 653
++ + T + ++ G I H + Y I +S VD +K+W
Sbjct: 165 FASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCI----LATSSVDKTVKVW 220
Query: 654 DIRNNQISLKI-KGH 695
D+R+ ++ L + GH
Sbjct: 221 DVRSYRVPLAVLNGH 235
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWD 404
+ + +W+V + V+ GH A+ ++ FSP L + D +V +WD
Sbjct: 215 KTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
+ +W Q V M+ H G + + F P+G + T + + +WD+ ++ +
Sbjct: 263 VTMWKPTSQAPLVQ-MQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI-- 319
Query: 441 HANFVNSVSGARRG 482
H+ ++S +++G
Sbjct: 320 HSFHAKTLSFSQKG 333
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 97 SVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEIFTGKFHPEGKHLASAGFEDK 261
SVVG + TS AP++ ++ H G + + FHP G +A++G E K
Sbjct: 252 SVVGLGHSGGTVTMWKPTSQ--APLVQMQCHPGPVSSVAFHPNGHLMATSGKERK 304
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGH-ANFVNSVSGARR 479
++GH G + L ++ +GS L +G+ D + +W+ + + + GH AN +
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 480 GPELLVSAS 506
EL+VS +
Sbjct: 106 SDELVVSGA 114
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 321 GAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 500
G I +CF+ + + G T V+ WD+ R+ + + N V S+ R ++V+
Sbjct: 304 GGIQTICFNQGTNLAFIGTTGGYVSCWDLRKMDRLWEKRVSPNVVYSIQQLRNDTSVMVA 363
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 31.1 bits (67), Expect = 0.76
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +3
Query: 255 RQILIWN--VYGQCENVMVMKGHTGAIMQLCFSPD----GSHLYTGATDNTVAVWDVPTG 416
+ I +W V G V+ GH G + L SP+ G LY+G D ++ VW VP
Sbjct: 338 KSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDKSLRVWWVPKQ 397
Query: 417 TRIKKLK 437
+++ K
Sbjct: 398 DNLEEKK 404
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +3
Query: 339 CFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSV 464
C + +Y+G+ D T+ VW + ++ +K H + +N +
Sbjct: 179 CLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL 220
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 401
KGH G + + F+P G +G+ D T+ +W
Sbjct: 267 KGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/67 (20%), Positives = 29/67 (43%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 488
+GH GA+ C + + + D + +WD TG + + H + V + + ++
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDTKY 116
Query: 489 LLVSASE 509
L+ E
Sbjct: 117 LITGGFE 123
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 401
E + KGH G + + F+P G +G+ D T+ +W
Sbjct: 261 EEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 488
+GH GA+ C + + + D + +WD TG + + H + V + + +
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKS 116
Query: 489 LLVSASE 509
LL E
Sbjct: 117 LLTGGFE 123
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 291 ENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVW 401
E + KGH G + + F+P G +G+ D T+ +W
Sbjct: 261 EEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPE 488
+GH GA+ C + + + D + +WD TG + + H + V + + +
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKS 116
Query: 489 LLVSASE 509
LL E
Sbjct: 117 LLTGGFE 123
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
+ IW+V + ++ H G L S G L+TG D + ++++
Sbjct: 317 VYIWDVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEI 365
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 294 NVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
++ + GHT A+ + ++T D+ V +WD+ G I K
Sbjct: 154 SIDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASK 201
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
+ GH+ + FS + ++ + + D T+ VW++ G I+ + G
Sbjct: 212 LTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYG 256
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
H G+I+ + FS DG +L + D V VW++
Sbjct: 256 HDGSIVVMKFSHDGKYLASAGEDCVVRVWNI 286
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 187 HQGEIFTGKFHPEGKHLASAG 249
H G I KF +GK+LASAG
Sbjct: 256 HDGSIVVMKFSHDGKYLASAG 276
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 506
FS DG L + D+TV + D TG +K L GH V R E++ S S
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGS 165
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 506
FS DG L + D+TV + D TG +K L GH V R E++ S S
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGS 165
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKL-KGHANFVNSVSGARRG 482
H A+ L S DG+ LY+ + D T+ +W ++ H + +N+V+ + G
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENG 220
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 342 FSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 443
FS DG L + D+TV + D TG +K L GH
Sbjct: 114 FSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGH 147
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 633 DNVIKMWDIRNNQISLKIKGHTDTVTGL 716
D+ I ++++R +++ K+KGH +TGL
Sbjct: 883 DSTIHIYNVRVDEVKSKLKGHQKRITGL 910
>At5g22590.1 68418.m02638 hypothetical protein
Length = 304
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Frame = +3
Query: 540 KGIQLHRL-TVHIQSQVYSSMIQLKKFLSSGVD----NVIKMWDIRNNQISLKIKGHTDT 704
+ I L RL TVH+Q VY++ L+ F+SS ++++ DI +N L++ H+ T
Sbjct: 90 ESISLPRLKTVHLQLNVYANDAGLESFISSYPAHEDFSIVRSVDIDDNVNVLRV--HSQT 147
Query: 705 VTGL 716
+T L
Sbjct: 148 LTSL 151
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 618 LSSGVDNVIKMWDIRNNQI--SLKIKGHTDTVTG 713
+SS +D +++WD+R + +KGH D V+G
Sbjct: 469 VSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVSG 502
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +3
Query: 330 MQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASE 509
+ FSP+G + +G+ D + W V +G ++ G + + P + +SE
Sbjct: 254 LDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSE 313
Query: 510 I 512
+
Sbjct: 314 L 314
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
KGH ++ L G +G+ D TV +WD R++K +G
Sbjct: 117 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWD----QRVEKCQG 156
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +3
Query: 330 MQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSASE 509
+ FSP+G + +G+ D + W V +G ++ G + + P + +SE
Sbjct: 251 LDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSE 310
Query: 510 I 512
+
Sbjct: 311 L 311
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKG 440
KGH ++ L G +G+ D TV +WD R++K +G
Sbjct: 114 KGHHDRVVSLSLCSGGECFISGSLDRTVLLWD----QRVEKCQG 153
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCF--SPDGSHLY--TGATDNTVAVW------DVPTG 416
+W+ G C +++ +GH+GAI + S D + T + D T+ ++ V +
Sbjct: 135 VWSSAGSCSHIL--EGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDST 192
Query: 417 TRI---KKLKGHANFVNSVSGARRGPELLVSASEIT 515
T++ K L+GH V SVS + G + S+ + T
Sbjct: 193 TKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCT 228
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Frame = +3
Query: 267 IWNVYGQCENVMVMKGHTGAIMQLCF--SPDGSHLY--TGATDNTVAVW------DVPTG 416
+W+ G C +++ +GH+GAI + S D + T + D T+ ++ V +
Sbjct: 135 VWSSAGSCSHIL--EGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDST 192
Query: 417 TRI---KKLKGHANFVNSVSGARRGPELLVSASEIT 515
T++ K L+GH V SVS + G + S+ + T
Sbjct: 193 TKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCT 228
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = +3
Query: 285 QCENVMVMKGHTGA-----IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGH 443
Q E+ M+ G G + +CF+ GS L G D V VWD+ + K + H
Sbjct: 462 QMESKMIWLGLQGERSQSPVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEH 519
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 410
H + FSPDG TG D ++ +++VP
Sbjct: 30 HKSVVRCARFSPDGMFFATGGADTSIKLFEVP 61
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLYTGATDNTVAVWDVP 410
H + FSPDG TG D ++ +++VP
Sbjct: 122 HKSVVRCARFSPDGMFFATGGADTSIKLFEVP 153
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 282 GQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANF 452
G C + ++GH+ L +S HL +G+ D + +WD+ + K L F
Sbjct: 166 GACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIF 223
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTV 392
+ + +W++ + T + +CFSPD +L A DN V
Sbjct: 606 KDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEV 651
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 29.1 bits (62), Expect = 3.1
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +3
Query: 318 TGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
+G + + +SPD +++G++D + WD
Sbjct: 198 SGRALSVTWSPDAKRIFSGSSDGLIRCWD 226
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 633 DNVIKMWDIRNNQISLKIKGHTDTVTGL 716
D+ I ++++R +++ K+KGH +TGL
Sbjct: 894 DSSIHIYNVRVDEVKTKLKGHQKHITGL 921
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 29.1 bits (62), Expect = 3.1
Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 9/156 (5%)
Frame = +3
Query: 261 ILIWNVYGQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLK 437
+ IW+ G + H + FSP D + +G+ D +V +W + + +
Sbjct: 790 VQIWDA-GTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIW 848
Query: 438 GHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSMIQLKKF 617
AN + L +++ Y ++ L H ++ Y + +
Sbjct: 849 SPANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETI 908
Query: 618 LSSGVDNVIKMWDIRNNQ--------ISLKIKGHTD 701
+S+ DN +K+W++ SL KGHT+
Sbjct: 909 VSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTN 944
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 315 HTGAIMQLCFSPDGSHLY-TGATDNTVAVWDVPT-GTRIKKLKGHANFVNSVSGARRGPE 488
H I + F+P H+ T +TD T +WD+ + G + K N +V A P
Sbjct: 347 HERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPS 406
Query: 489 LLVSAS 506
L A+
Sbjct: 407 GLSLAT 412
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 324 AIMQLCFSP-DGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVS 500
AI L P D LY G VWD+ G + + H +NS+ + P ++ +
Sbjct: 307 AIFSLSQRPNDEQSLYFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMAT 366
Query: 501 AS 506
+S
Sbjct: 367 SS 368
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = +2
Query: 17 KKCQI*KLKEKQRMCLLYPPSEYGMRSQ*SAPEK-----RQLLLHLFHEHQTCMRQLCCW 181
KKC + KEK M E + Q EK ++ LL L E + +RQLC W
Sbjct: 466 KKCVVEMKKEKDEMAKEKEEVEKKLEGQVREEEKEKEKLKETLLGLGEEKREAIRQLCIW 525
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDV 407
V ++ H + + + D + L TG+ D TV VWD+
Sbjct: 1039 VQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
>At1g03380.1 68414.m00317 expressed protein
Length = 926
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV 407
V K HT I LCF P G+ L T + N + V+ +
Sbjct: 371 VSQFKAHTSPISALCFDPSGTLLVTASVCGNNINVFQI 408
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 327 IMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLVSAS 506
+ + F P TG D V +WD R+ + + ++++S +R G L V++S
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVASS 303
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
+ K H G++ ++ P S TG+ D V +WD
Sbjct: 2370 IPKAHLGSVTKIATIPRTSLFLTGSKDGEVKLWD 2403
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/100 (20%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 420 RIKKLKGHANFVNSVSGARRGPELLVSASEITP*NYGMQGKGIQLHRLTVHIQSQVYSSM 599
R +K++ H +V G ++ ++++ + ++ G Q+ L + V + +
Sbjct: 43 RERKVRAHKESCRAVRFIDDGQRIVTASADCSILATDVE-TGAQVAHLENAHEDAVNTLI 101
Query: 600 IQLKKFLSSGVDN-VIKMWDIRNNQISLKIKGHTDTVTGL 716
+ ++SG D +K+WD R S + H D ++G+
Sbjct: 102 NVTETTIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGM 141
>At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repeats
(PF00400) (1 weak) submitForm();
Length = 927
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLYTGAT-DNTVAVWDV-PTGTR 422
+ HT I LCF P G+ L T + N + V+ + PT T+
Sbjct: 378 RAHTSPISALCFDPSGTLLVTASIHGNNINVFRIMPTPTK 417
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/53 (18%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPT 413
+++I ++ V ++ H ++ + ++P H+ +G D +W++PT
Sbjct: 244 KVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 296
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/53 (18%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPT 413
+++I ++ V ++ H ++ + ++P H+ +G D +W++PT
Sbjct: 244 KVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 296
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/53 (18%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 258 QILIWNVYGQCENVMVMKGHTGAIMQLCFSPDG-SHLYTGATDNTVAVWDVPT 413
+++I ++ V ++ H ++ + ++P H+ +G D +W++PT
Sbjct: 244 KVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPT 296
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +3
Query: 324 AIMQLCFSPDGSHLYTGATDNTVAVWDV 407
A++ +SPDG H+ +G+ D + ++D+
Sbjct: 584 ALINQSWSPDGLHISSGSADPVIHIFDI 611
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 615 FLSSGVDNVIKMWDIRNNQISLKIKGHTDTVTGL 716
F S+G D + +WD R NQ+ ++K H V L
Sbjct: 233 FGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYL 266
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 157 LYAPIMLLEGHQGEIFTGKFHPEGKHLASAGFEDK 261
L AP+ ++ H+GE+F ++ P + + ++ ED+
Sbjct: 293 LNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDR 327
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 615 FLSSGVDNVIKMWDIRNNQISLKIKGH 695
F S+G D + +WD+R NQ+ ++K H
Sbjct: 234 FGSAGDDCQLVIWDLRTNQMQHQVKVH 260
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 157 LYAPIMLLEGHQGEIFTGKFHPEGKHLASAGFEDK 261
L AP+ +L H+GE+F ++ P + + ++ ED+
Sbjct: 294 LTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDR 328
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 261 ILIWNVY-GQCENVMVMKGHTGAIMQLCFSP-DGSHLYTGATDNTVAVWD 404
+++W+ G + V K H + + ++P D + + TG+ DNTV V+D
Sbjct: 306 LMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFD 355
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 297 VMVMKGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWD 404
V +GH A++ + +SPD S ++ + A D + +WD
Sbjct: 368 VYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 404
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 306 MKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
++ H A+ + S D S + + D+TV VWD
Sbjct: 1077 LQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
>At4g27620.2 68417.m03970 expressed protein
Length = 325
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 104 SAPEKRQLLLHLFHEHQTCMRQLCCWKDTKEKFSQANFILK 226
S+P+ ++ + +H+H TC C + + FS+ I K
Sbjct: 138 SSPDHLEVPMKAYHQHSTCSDSPCVSESGSDIFSKREVIQK 178
>At4g27620.1 68417.m03969 expressed protein
Length = 325
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 104 SAPEKRQLLLHLFHEHQTCMRQLCCWKDTKEKFSQANFILK 226
S+P+ ++ + +H+H TC C + + FS+ I K
Sbjct: 138 SSPDHLEVPMKAYHQHSTCSDSPCVSESGSDIFSKREVIQK 178
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +3
Query: 303 VMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRG 482
V H ++ + DG+ ++TG D +W + +G + + H N ++ G
Sbjct: 68 VSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWI-PG 126
Query: 483 PELLVSAS 506
LLV+ S
Sbjct: 127 MNLLVTGS 134
>At5g09820.1 68418.m01136 plastid-lipid associated protein PAP /
fibrillin family protein low similarity to plastid-lipid
associated protein PAP3 [Brassica rapa] GI:14248552;
contains Pfam profile PF04755: PAP_fibrillin
Length = 259
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = -3
Query: 158 KFDVRGTDEVTTAFSLVPTTEISCRTRLEGTRDTSS 51
KFDVRG + + F +V + +IS ++ +E T ++S+
Sbjct: 183 KFDVRGLNLLDGEFRIVASFKISSKSSVEITYESST 218
>At5g05570.1 68418.m00605 transducin family protein / WD-40 repeat
family protein similar to unknown protein (pir||T04661);
contains Pfam PF00400: WD domain, G-beta repeat (4
copies, 2 weak)|8683726|gb|AV524198.1|AV524198
Length = 1124
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 327 IMQLCF-SPDGSHLYTGATDNTVAVWDVPTGTRIKKLKGHANFVNSVSGARRGPELLV 497
I LC+ S DGS L G D + WD G + K H + S +R P +++
Sbjct: 258 ISSLCWASTDGSVLAVGYVDGDILFWDFSDGQK-GKPSNHVVKLQLSSAEKRLPVIVM 314
>At5g04800.2 68418.m00499 40S ribosomal protein S17 (RPS17D) 40S
ribosomal protein S17, Lycopersicon esculentum,
EMBL:AF161704
Length = 141
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 28 DIETKRKA-EDVSLVPSKRVRHEISVVGT 111
D T +K E+V+++PSKR+R++I+ T
Sbjct: 27 DFHTNKKILEEVAIIPSKRLRNKIAGFST 55
>At5g04800.1 68418.m00498 40S ribosomal protein S17 (RPS17D) 40S
ribosomal protein S17, Lycopersicon esculentum,
EMBL:AF161704
Length = 141
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 28 DIETKRKA-EDVSLVPSKRVRHEISVVGT 111
D T +K E+V+++PSKR+R++I+ T
Sbjct: 27 DFHTNKKILEEVAIIPSKRLRNKIAGFST 55
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 509 DNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK 613
D TIK+W RK P+ +PV+S F + E+
Sbjct: 343 DGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPER 379
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 509 DNTIKLWDARKRNPVASF--DSSYPVTSVLFNDTAEK 613
D TIK+W RK P+ +PV+S F + E+
Sbjct: 378 DGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPER 414
>At3g10610.1 68416.m01276 40S ribosomal protein S17 (RPS17C) similar
to 40S ribosomal protein S17 GB:AAD50774 [Lycopersicon
esculentum]
Length = 140
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 28 DIETKRKA-EDVSLVPSKRVRHEISVVGT 111
D T +K E+V+++PSKR+R++I+ T
Sbjct: 27 DFHTNKKILEEVAIIPSKRLRNKIAGFST 55
>At2g43500.1 68415.m05405 RWP-RK domain-containing protein low
similarity to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 947
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 129 YFICSTNIKLVCANYVVGRTPRRNFHR 209
YF C T +K +C + + R P R ++
Sbjct: 624 YFFCPTTLKRICRQHGIMRWPSRKINK 650
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 618 LSSGVDN-VIKMWDIRNNQISLKIKGHTDTVTGL 716
++SG D +K+WD R S + H D ++G+
Sbjct: 51 IASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGM 84
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 309 KGHTGAIMQLCFSPDGSHLY-TGATDNTVAVWD 404
+GH A++ + +SPD S ++ + A D + +WD
Sbjct: 383 EGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWD 415
>At2g05220.1 68415.m00550 40S ribosomal protein S17 (RPS17B)
Length = 140
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 28 DIETKRKA-EDVSLVPSKRVRHEISVVGT 111
D T +K E+V+++PSKR+R++I+ T
Sbjct: 27 DFHTNKKILEEVAIIPSKRLRNKIAGFST 55
>At2g04390.1 68415.m00442 40S ribosomal protein S17 (RPS17A)
Length = 141
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 28 DIETKRKA-EDVSLVPSKRVRHEISVVGT 111
D T +K E+V+++PSKR+R++I+ T
Sbjct: 27 DFHTNKKILEEVAIIPSKRLRNKIAGFST 55
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 255 RQILIWNVYGQCENVMVMKGHTGAIMQLCFSPDGSHLYTGATDNTVAVWD 404
+Q +W + + V V H G I + + P + L TG+ D T+ WD
Sbjct: 94 KQAKMWPLLSGGQPVTVAM-HEGPIAAMAWIPGMNLLATGSWDKTLKYWD 142
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 509 DNTIKLWDARKRNPV 553
D T+K WD R++NPV
Sbjct: 135 DKTLKYWDTRQQNPV 149
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,667,949
Number of Sequences: 28952
Number of extensions: 358546
Number of successful extensions: 2015
Number of sequences better than 10.0: 233
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1856
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -