Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0508
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    24   0.93 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   1.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   3.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.0  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   8.7  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 530 DPFVDTLSGSSFYNYLNEGF 589
           D   + L+G  FYN+LN  F
Sbjct: 390 DSCSNILTGDQFYNFLNHNF 409


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 516 PLYTNDHIPTEIYN 475
           PL T + +PTEIYN
Sbjct: 348 PLLTLNSVPTEIYN 361


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 336 HPDKNPNEAKQEKFLKITEAY 398
           HP+ NP+E    +  +I  AY
Sbjct: 291 HPESNPSERVMRELGRIFRAY 311


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 548 LSGSSFYNYLNEGFHFINFYS 610
           ++ +SFY  LN G++   F S
Sbjct: 244 MTTTSFYRILNSGYNLTTFGS 264


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 303 KQAYKKLVVKFHPDKNPNEAKQEKF 377
           +Q +K+L  K+ PD    E  ++KF
Sbjct: 93  QQMWKELTAKYDPDGIYFEKYKDKF 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,092
Number of Sequences: 336
Number of extensions: 3100
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)