Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0508
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 78 6e-15
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 77 1e-14
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 75 3e-14
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 74 1e-13
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 74 1e-13
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 71 7e-13
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 71 9e-13
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 68 5e-12
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 65 3e-11
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 64 6e-11
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 63 2e-10
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 62 2e-10
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (pr... 60 1e-09
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 59 2e-09
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 59 3e-09
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 58 4e-09
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 56 3e-08
Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 54 1e-07
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 45 4e-05
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 45 5e-05
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 45 5e-05
Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical p... 43 2e-04
AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain (... 42 4e-04
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 38 0.006
CU457741-21|CAM36361.1| 231|Caenorhabditis elegans Hypothetical... 37 0.014
AL132859-7|CAB60495.2| 231|Caenorhabditis elegans Hypothetical ... 37 0.014
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 35 0.043
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 35 0.043
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 35 0.043
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 35 0.043
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 33 0.13
U80438-2|AAB37632.1| 112|Caenorhabditis elegans Dnaj domain (pr... 33 0.17
U55857-8|AAA98034.1| 145|Caenorhabditis elegans Dnaj domain (pr... 32 0.40
U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2... 32 0.40
U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2... 32 0.40
U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2... 32 0.40
AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility... 32 0.40
AF067943-5|AAC17663.1| 161|Caenorhabditis elegans Hypothetical ... 29 2.1
Z93391-3|CAB07682.1| 363|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68121-1|CAA92204.2| 174|Caenorhabditis elegans Hypothetical pr... 29 3.7
U00044-5|AAK93857.1| 174|Caenorhabditis elegans Mesoderm and en... 29 3.7
AF302238-1|AAG21386.1| 174|Caenorhabditis elegans GATA-type tra... 29 3.7
AF302237-1|AAG21385.1| 174|Caenorhabditis elegans GATA-type tra... 29 3.7
U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa hydra... 28 4.9
AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical ... 28 4.9
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 28 6.5
U64845-3|AAC48032.2| 312|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z66515-10|CAI70410.1| 510|Caenorhabditis elegans Hypothetical p... 27 8.6
Z66515-9|CAA91346.1| 519|Caenorhabditis elegans Hypothetical pr... 27 8.6
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 27 8.6
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 84.6 bits (200), Expect = 5e-17
Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 YYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEA-KQEKFLKITEAYETLKDPEKRRN 431
+Y++LG+ K AS EIK AY+KL +K+HPD+NPN+A QE+F K++ AY L DP KRR
Sbjct: 18 FYQLLGVEKMASEAEIKSAYRKLALKYHPDRNPNDAHAQEEFKKVSIAYSVLSDPNKRRQ 77
Query: 432 YDLYG 446
YD+ G
Sbjct: 78 YDVSG 82
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 77.8 bits (183), Expect = 6e-15
Identities = 31/64 (48%), Positives = 47/64 (73%)
Frame = +3
Query: 255 YYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNY 434
YY++LGI+K A+ EIK+AY+K+ +K+HPDKN + KF +I EAY+ L D +K++ Y
Sbjct: 5 YYKVLGISKGATDDEIKKAYRKMALKYHPDKNKEAGAENKFKEIAEAYDVLSDDKKKKIY 64
Query: 435 DLYG 446
D +G
Sbjct: 65 DQFG 68
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/65 (47%), Positives = 48/65 (73%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNYD 437
Y++LGI+++AS +EIK AYK L ++HPDK +EA +F++I EAYE L DP ++ YD
Sbjct: 24 YKVLGISRRASAKEIKSAYKSLAREWHPDKRKDEAASGRFMEIAEAYEVLSDPLRKERYD 83
Query: 438 LYGSY 452
+G++
Sbjct: 84 RFGTF 88
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 75.4 bits (177), Expect = 3e-14
Identities = 33/64 (51%), Positives = 48/64 (75%)
Frame = +3
Query: 255 YYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNY 434
YY++LG+ AS E+K+AY+K+ +KFHPDKNP+ A E+F +I++AYE L D +KR+ Y
Sbjct: 7 YYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGA--EQFKQISQAYEVLSDEKKRQIY 64
Query: 435 DLYG 446
D G
Sbjct: 65 DQGG 68
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +3
Query: 255 YYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNY 434
YY+ LG+ K++ + IK+AY +L K+HPD N + Q KF +I+EAYE L D KR+ Y
Sbjct: 45 YYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKTKEAQTKFQEISEAYEVLSDDTKRQEY 104
Query: 435 DLYGS 449
D YGS
Sbjct: 105 DAYGS 109
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +3
Query: 255 YYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNY 434
YY+ LG+ K++ + IK+AY +L K+HPD N + Q KF +I+EAYE L D KR+ Y
Sbjct: 45 YYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKTKEAQTKFQEISEAYEVLSDDTKRQEY 104
Query: 435 DLYGS 449
D YGS
Sbjct: 105 DAYGS 109
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +3
Query: 249 RIYYEILGITKQASTQEIKQAYKKLVVKFHPDKN-PNEAKQEKFLKITEAYETLKDPEKR 425
R +Y+ILG+ K A+ +IK+AY+KL + HPD+N +E EKF ++ AYE L D EKR
Sbjct: 23 RDFYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMANEKFQDLSSAYEVLSDKEKR 82
Query: 426 RNYDLYG 446
YD +G
Sbjct: 83 AMYDRHG 89
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 70.5 bits (165), Expect = 9e-13
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 YYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAK-QEKFLKITEAYETLKDPEKRRN 431
YYE+LG+ + A + I++A+KKL +K HPD+N ++ ++F+KI +AYE LKD R+
Sbjct: 21 YYELLGVERDADDRTIRKAFKKLAIKKHPDRNTDDPNAHDEFVKINKAYEVLKDENLRKK 80
Query: 432 YDLYG 446
YD +G
Sbjct: 81 YDQFG 85
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 515 GLYHNDPFVDTLSGSSFYNYLNEG--FHFINFYSPFCPPCQNI 637
G+Y +D + TL+ + F +++ FINFYS +C C +
Sbjct: 110 GIYDDDQEIVTLNRADFQRMVSDSNEIWFINFYSTYCSHCHQL 152
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +2
Query: 566 YNYLNEG--FHFINFYSPFCPPCQNI 637
Y Y G F+ I++++P+CPPC +
Sbjct: 448 YEYAISGGEFYIIDYFAPWCPPCMKL 473
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3
Query: 243 HRRIYYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEK 422
H + YYEIL I K+AS +I++ Y+KL +K HPDK E F + AY L D +K
Sbjct: 134 HCKDYYEILKIDKKASDDDIRKEYRKLALKLHPDKCRAPHATEAFKALGNAYAVLSDTDK 193
Query: 423 RRNYDLYGS 449
RR YD YG+
Sbjct: 194 RRQYDQYGA 202
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +3
Query: 249 RIYYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQ--EKFLKITEAYETLKDPEK 422
+ +YE+L + + A +IK+ Y+KL +K+HPDKNP+ ++ ++F + AY+ L DP +
Sbjct: 27 KCHYEVLEVERDADDDKIKKNYRKLALKWHPDKNPDRIEECTQQFRLLQAAYDVLSDPRE 86
Query: 423 RRNYDLYGSYTTYSRKYDYKSQS 491
R YD + + D++ QS
Sbjct: 87 REFYDRHRESILKGKNTDFEEQS 109
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 64.5 bits (150), Expect = 6e-11
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Frame = +3
Query: 246 RRIYYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAK----QEKFLKITEAYETLKD 413
+R YY+ILG+ + AS +EI +AY+KL K+HPD +E + ++KF+ I A E L+D
Sbjct: 377 KRDYYKILGVKRNASKREITKAYRKLAQKWHPDNFSDEEEKKKAEKKFIDIAAAKEVLQD 436
Query: 414 PEKRRNYD 437
EKRR +D
Sbjct: 437 EEKRRQFD 444
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKN--PNEAKQEKFLKITEAYETLKDPEKRRN 431
Y +LGI K A+ EIK+AY+KL +++HPDKN + K E F +I A L +P KRR
Sbjct: 40 YNVLGIQKNATDDEIKKAYRKLALRYHPDKNLDGDPEKTEMFKEINYANAVLSNPNKRRV 99
Query: 432 YDLYG 446
YD G
Sbjct: 100 YDEMG 104
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNYD 437
Y L + AS +IK++Y KL ++HPDKNP+ +KF +I+ AYE L PEKRR YD
Sbjct: 15 YTTLNVRPDASQADIKKSYFKLAKEYHPDKNPDHG--DKFKEISFAYEVLSSPEKRRLYD 72
Query: 438 LYG 446
G
Sbjct: 73 ARG 75
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 60.9 bits (141), Expect = 8e-10
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +3
Query: 180 LTKRNVKTSIYRDSPYRSG*PHRRIYYEILGITKQASTQEIKQAYKKLVVKFHPDKNP-- 353
L N K S++ P S H Y++LG+ + AS ++IK AY KL + HPD NP
Sbjct: 4 LAVANQKRSLFLSVPCSSQQDH----YKVLGLAQSASQKDIKSAYYKLSKQHHPDTNPTN 59
Query: 354 NEAKQEKFLKITEAYETLKDPEKRRNYDL 440
E +KF ++ AYE L +KR+ YD+
Sbjct: 60 KEEAAKKFHQVAMAYEILSSEDKRKAYDM 88
>U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 4 protein.
Length = 274
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = +3
Query: 246 RRIYYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKR 425
+R +YE+LG+ A+ EIK A+ K HPD + E+ FL++ AY+ L+ P R
Sbjct: 26 QRTHYEVLGVESTATLSEIKSAFYAQSKKVHPDNSSEESATASFLELKNAYDVLRRPADR 85
Query: 426 RNYDLY-----GSYTTYSRKYDYKSQS-EYD 500
R YD G Y ++Y Y + + +YD
Sbjct: 86 RLYDYQLRGGGGRYPNGGQRYQYPNTAPQYD 116
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Frame = +3
Query: 246 RRIYYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAK----QEKFLKITEAYETLKD 413
+R YY+ILG+ + A+ +EI +AY+K+ K+HPD +E + ++KF+ I A E L +
Sbjct: 378 KRDYYKILGVRRNANKREITKAYRKMAQKWHPDNFQDEKEKKKAEKKFIDIAAAKEVLSN 437
Query: 414 PEKRRNYD 437
EKRR +D
Sbjct: 438 EEKRRAFD 445
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 255 YYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNY 434
+Y+IL + K+AS EI+ A++K + + HPDK + + E + A+ L DP KRR Y
Sbjct: 28 FYKILNVDKKASPDEIRIAFRKRIREVHPDKCKHPSATEASKVVNNAFSLLMDPAKRRQY 87
Query: 435 DLYGSYTTYSRKY 473
DL + T+ Y
Sbjct: 88 DLQNAETSNENLY 100
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKNPN----EAKQEKFLKITEAYETLKDPEKR 425
Y LGI+ + EIK+AY+KL +K+HPDK+ + E ++KF KI +AYE L D +KR
Sbjct: 9 YITLGISSTSDDVEIKKAYRKLALKWHPDKHTDDKSKEEAEQKFKKIAQAYEILTDKKKR 68
Query: 426 RNYD 437
+ D
Sbjct: 69 ADLD 72
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 13/78 (16%)
Frame = +3
Query: 246 RRIYYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQ-------------EKFLKI 386
R+ YYEI+G++ A+ QEI+ A+ K + HPD++ +K E+F+ +
Sbjct: 16 RKNYYEIIGVSASATRQEIRDAFLKKTKQLHPDQSRKSSKSDSRVGWATGSSETEQFMLV 75
Query: 387 TEAYETLKDPEKRRNYDL 440
EAY+ L++ EKR+ YDL
Sbjct: 76 KEAYDVLRNEEKRKEYDL 93
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKN--PNEAKQEKFLKITEAYETLKDPEKRRN 431
Y+IL + K + +EI++AY+ +K+HPDKN E + +F++ EA++ L D EKR
Sbjct: 10 YKILHLEKGCTDKEIQKAYRAQCLKWHPDKNLDNKEEAERRFIEAKEAFDFLYDKEKREE 69
Query: 432 YDLYGSYTTYSRKYDYKSQSEYD 500
YD ++++ K +E D
Sbjct: 70 YDNREERIRMAQEHHSKRMAEAD 92
>Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical
protein B0035.2 protein.
Length = 337
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +3
Query: 258 YEILGITKQA-STQEIKQAYKKLVVKFHPDKNPNEAK----QEKFLKITEAYETLKDPEK 422
Y++L + ++ Q++ +AY+ L K HPD+ N+ + +E+F I AYETLKD E
Sbjct: 38 YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEA 97
Query: 423 RRNYDLYGSYTTYSRKYDY 479
+ NYD Y + R Y+Y
Sbjct: 98 KTNYDYYLDHPD-QRFYNY 115
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Frame = +3
Query: 255 YYEILGITKQASTQEIKQAYKKLVVKFHPDK-NPNEAKQEK---FLKITEAYETLKDPEK 422
+Y IL + K A+ EI +AY+K + FHPD+ N+ K++ F+K+ A+E L DP++
Sbjct: 27 FYAILNVPKDATDDEIIKAYRKRCLMFHPDRFVDNDEKKDAERVFVKLRRAHEVLLDPKQ 86
Query: 423 RRNYDLYGSYTTYSRKYDYKSQS 491
R YD G ++ ++ S+S
Sbjct: 87 RAIYDALGVQGLDTQGWELVSRS 109
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKN-----PNEAKQEKFLKITEAYETLKDPEK 422
YE+LG+ K + +K+ Y + +++HPDK+ + KF + +AY+ L D EK
Sbjct: 16 YELLGVKKDCDEKALKKGYYRQSMRWHPDKSNLVEEDMQTYTTKFQLLNKAYQILSDEEK 75
Query: 423 RRNYDLYGS 449
R+ YD GS
Sbjct: 76 RKIYDETGS 84
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Frame = +3
Query: 255 YYEILGITK---QASTQEIKQAYKKLVVKFHPDKNPNEA----KQEKFLKITEAYETL-K 410
+Y++LG++K QA++ EI+ Y++ V+K HPDK + K+E F IT+AYE +
Sbjct: 99 HYKVLGLSKLRWQATSDEIRFCYRQKVLKHHPDKKKHRGIVMEKEEYFTCITKAYEQVGM 158
Query: 411 DPEKRRNYD 437
KR+ +D
Sbjct: 159 SDVKRQAFD 167
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/64 (34%), Positives = 38/64 (59%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNYD 437
Y+ILG+ + A + IK+A++ + HPD+ + F KI +A++ L D E R N++
Sbjct: 109 YQILGLDQGADEKAIKKAWRDMSKIHHPDRG---GDAQFFDKIAKAHQALTDKEARENWE 165
Query: 438 LYGS 449
YG+
Sbjct: 166 KYGN 169
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/64 (34%), Positives = 38/64 (59%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNYD 437
Y+ILG+ + A + IK+A++ + HPD+ + F KI +A++ L D E R N++
Sbjct: 109 YQILGLDQGADEKAIKKAWRDMSKIHHPDRG---GDAQFFDKIAKAHQALTDKEARENWE 165
Query: 438 LYGS 449
YG+
Sbjct: 166 KYGN 169
>Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical
protein K07F5.16 protein.
Length = 155
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDK--NPNEAKQEKFLKITEAYETLKDPEKRRN 431
Y +LG + +S +I Y+ V HPDK N EKF+++ AY L +R+
Sbjct: 17 YRLLGCDESSSIDQITAEYRARVRDCHPDKVKEHNTNSTEKFMELQNAYSILTSDSRRKT 76
Query: 432 YD 437
YD
Sbjct: 77 YD 78
>AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 30 protein.
Length = 238
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKNPN--EAKQEKFLKITEAYETLKDP-EKRR 428
YE+L I + K+ YKKL + HPDKNP+ E + F + +A + ++DP E R
Sbjct: 43 YEVLQIDLDTDIEAAKKKYKKLSLLVHPDKNPDDRERADKAFDIVKKAIKQMEDPIELNR 102
Query: 429 NYDLY 443
D Y
Sbjct: 103 CKDCY 107
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +3
Query: 300 IKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETL 407
I++ Y KL K+HPDKNP +E F +I AYE L
Sbjct: 1341 IRRQYYKLAAKYHPDKNPE--GREMFERINAAYELL 1374
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +3
Query: 300 IKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETL 407
I++ Y KL K+HPDKNP +E F +I AYE L
Sbjct: 1341 IRRQYYKLAAKYHPDKNPE--GREMFERINAAYELL 1374
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +3
Query: 300 IKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETL 407
I++ Y KL K+HPDKNP +E F +I AYE L
Sbjct: 1341 IRRQYYKLAAKYHPDKNPE--GREMFERINAAYELL 1374
>CU457741-21|CAM36361.1| 231|Caenorhabditis elegans Hypothetical
protein Y39C12A.9 protein.
Length = 231
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 255 YYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNY 434
+Y++L + K A+ EI AY + K P+ +P K++ L AY TL DP R Y
Sbjct: 9 HYQVLKVRKNATHFEIYNAYMNSMAKVDPN-DPYVFKKD--LAFGLAYSTLSDPGLREEY 65
Query: 435 D 437
D
Sbjct: 66 D 66
>AL132859-7|CAB60495.2| 231|Caenorhabditis elegans Hypothetical
protein Y39C12A.9 protein.
Length = 231
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 255 YYEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNY 434
+Y++L + K A+ EI AY + K P+ +P K++ L AY TL DP R Y
Sbjct: 9 HYQVLKVRKNATHFEIYNAYMNSMAKVDPN-DPYVFKKD--LAFGLAYSTLSDPGLREEY 65
Query: 435 D 437
D
Sbjct: 66 D 66
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNYD 437
Y + G+ S +IK+ YK+L PDK +A + + + A+ + + R Y
Sbjct: 662 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIGYKDSRSEYT 721
Query: 438 L 440
L
Sbjct: 722 L 722
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNYD 437
Y + G+ S +IK+ YK+L PDK +A + + + A+ + + R Y
Sbjct: 662 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIGYKDSRSEYT 721
Query: 438 L 440
L
Sbjct: 722 L 722
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNYD 437
Y + G+ S +IK+ YK+L PDK +A + + + A+ + + R Y
Sbjct: 662 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIGYKDSRSEYT 721
Query: 438 L 440
L
Sbjct: 722 L 722
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 258 YEILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNYD 437
Y + G+ S +IK+ YK+L PDK +A + + + A+ + + R Y
Sbjct: 661 YSVFGLRSDCSDDDIKRNYKRLAALVSPDKCTIDAADQVYELVDVAFSAIGYKDSRSEYT 720
Query: 438 L 440
L
Sbjct: 721 L 721
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 482 ISVGI*SFVYKGLYHNDPFVDTLSGSSFYNYLNEGFHFINFYSPFCPPCQNI 637
+S+ + FVY N P F + +EG F+ FY+P+C C+ +
Sbjct: 10 LSLSVLLFVYDTEATNPPTAVLDLSDKFLDVKDEGMWFVEFYAPWCAHCKRL 61
>U80438-2|AAB37632.1| 112|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 21 protein.
Length = 112
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 261 EILGITKQASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLK 410
+ILG+ A +IK+A+KK+++ HPD+ + K + + E+ K
Sbjct: 62 KILGVAPSAKPAKIKEAHKKVMIVNHPDRGGSPYLAAKINEAKDLMESSK 111
>U55857-8|AAA98034.1| 145|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 15 protein.
Length = 145
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Frame = +3
Query: 312 YKKLVVKFHPDKNPNEAKQEKFL------KITEAYETLKDPEKRRNY 434
+ +L K HPDK +EK L K+ EAY+ L DP KR Y
Sbjct: 7 FHQLQSKLHPDKFVMATDEEKKLSEEHSRKLNEAYKELADPFKRAKY 53
>U22831-3|AAK67237.1| 234|Caenorhabditis elegans Hmg protein 1.2,
isoform b protein.
Length = 234
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 312 YKKLVVKFHPDKNPNEAKQ--EKFLKITEAYETLKDPEKRRNYDL 440
+ K+ + H K PNE Q E K +E ++T+ D EKRR Y+L
Sbjct: 54 FVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYEL 98
>U22831-2|AAK67238.1| 233|Caenorhabditis elegans Hmg protein 1.2,
isoform c protein.
Length = 233
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 312 YKKLVVKFHPDKNPNEAKQ--EKFLKITEAYETLKDPEKRRNYDL 440
+ K+ + H K PNE Q E K +E ++T+ D EKRR Y+L
Sbjct: 55 FVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYEL 99
>U22831-1|AAK20071.1| 235|Caenorhabditis elegans Hmg protein 1.2,
isoform a protein.
Length = 235
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 312 YKKLVVKFHPDKNPNEAKQ--EKFLKITEAYETLKDPEKRRNYDL 440
+ K+ + H K PNE Q E K +E ++T+ D EKRR Y+L
Sbjct: 55 FVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYEL 99
>AF056577-1|AAC78599.1| 235|Caenorhabditis elegans high mobility
group protein 1.2 protein.
Length = 235
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 312 YKKLVVKFHPDKNPNEAKQ--EKFLKITEAYETLKDPEKRRNYDL 440
+ K+ + H K PNE Q E K +E ++T+ D EKRR Y+L
Sbjct: 55 FVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYEL 99
>AF067943-5|AAC17663.1| 161|Caenorhabditis elegans Hypothetical
protein F59B1.2 protein.
Length = 161
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 294 QEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLK-DPEKRRNYDLYGSYTTYSRK 470
+E+++A + +VVK P ++ K LK+T A+ET K + K+R+ Y R+
Sbjct: 70 EEVEEAEEVVVVK-QPVAQKHKISPPKSLKVTSAFETCKLECRKQRDAVQAADYVEQLRR 128
Query: 471 YDYKSQSEYD 500
+Q+ D
Sbjct: 129 ELASAQAALD 138
>Z93391-3|CAB07682.1| 363|Caenorhabditis elegans Hypothetical
protein W04G5.5 protein.
Length = 363
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/91 (20%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +3
Query: 315 KKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKRRNYDLYGSYTTYSRKYDYKSQSE 494
+ +V+ +PD + + K+ E + + YD+ ++S K + SQ+
Sbjct: 185 ESFLVRIYPDTPEDSISNKTLGKLIELPFNSGEEYSKFTYDIINDVYSHSPKEGFMSQAY 244
Query: 495 YDHLYIKDCT----IMIHLLTLYLDQVSTIT 575
Y I+ C I +HL +++++ +TI+
Sbjct: 245 YMD-NIQRCEEPDHITVHLCKIFMEKTATIS 274
>Z68121-1|CAA92204.2| 174|Caenorhabditis elegans Hypothetical
protein T24D3.1 protein.
Length = 174
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 515 GLY-HNDPFVDTLSGSSFYNYLNEGFHFINFYSPFCP 622
G Y ++ PF T S ++ Y+Y N + ++N Y+ + P
Sbjct: 22 GFYDYSTPFNGTYSFTTDYSYYNNYYDYVNTYASYYP 58
>U00044-5|AAK93857.1| 174|Caenorhabditis elegans Mesoderm and
endoderm determinationprotein 2 protein.
Length = 174
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 515 GLY-HNDPFVDTLSGSSFYNYLNEGFHFINFYSPFCP 622
G Y ++ PF T S ++ Y+Y N + ++N Y+ + P
Sbjct: 22 GFYDYSTPFNGTYSFTTDYSYYNNYYDYVNTYASYYP 58
>AF302238-1|AAG21386.1| 174|Caenorhabditis elegans GATA-type
transcription factor protein.
Length = 174
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 515 GLY-HNDPFVDTLSGSSFYNYLNEGFHFINFYSPFCP 622
G Y ++ PF T S ++ Y+Y N + ++N Y+ + P
Sbjct: 22 GFYDYSTPFNGTYSFTTDYSYYNNYYDYVNTYASYYP 58
>AF302237-1|AAG21385.1| 174|Caenorhabditis elegans GATA-type
transcription factor protein.
Length = 174
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 515 GLY-HNDPFVDTLSGSSFYNYLNEGFHFINFYSPFCP 622
G Y ++ PF T S ++ Y+Y N + ++N Y+ + P
Sbjct: 22 GFYDYSTPFNGTYSFTTDYSYYNNYYDYVNTYASYYP 58
>U50307-3|AAA92304.1| 258|Caenorhabditis elegans Enoyl-coa
hydratase protein 3 protein.
Length = 258
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 378 LKITEAYETLKDPEKRRNYDLYGSYTTYSRKYDYKSQSEYDHLYIKD 518
L++ +A+E + + LYG T+ YD +S S+ +H + +
Sbjct: 35 LQLIDAFEKFNEDSTMKTAVLYGEGGTFCAGYDLESVSKAEHQEVSE 81
>AF106575-6|AAC78175.2| 244|Caenorhabditis elegans Hypothetical
protein K04F1.1 protein.
Length = 244
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 252 IYYEILGITK--QASTQEIKQAYKKLVVKFHPDKNPNEAKQEKFLKITEAYETLKDPEKR 425
+Y G +K Q+ E K YK L + F + +E KI EAY L PE
Sbjct: 53 VYTHYTGNSKAGQSLFSERKIFYKSLNIIFQQLQAKSEVDAATIKKIEEAYVKLNGPEGA 112
Query: 426 RNYDLYGSYTT 458
+ L Y T
Sbjct: 113 KCKSLLRKYLT 123
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = +3
Query: 273 ITKQASTQEIKQAYKKLVVKFH---PDKNPNEA------KQEKFLKITEAYET---LKDP 416
+ ++ + K AY++L KFH P K E K+E+ LK T +Y+T D
Sbjct: 744 VDRKGREMDAKDAYRELSYKFHGRNPGKKQLEKRANRKDKEERMLK-TNSYDTPLGTLDK 802
Query: 417 EKRRNYDLYGSYTTYSRKYDYKS 485
++++ L Y S D+ S
Sbjct: 803 QRKKQKQLSTPYLVLSGSSDHSS 825
>U64845-3|AAC48032.2| 312|Caenorhabditis elegans Hypothetical
protein F45F2.11 protein.
Length = 312
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +3
Query: 318 KLVVKFHPDKNPNEAKQEKFLKITEAY---ETLKDPEKRRNYDLYGSYTTYSRKYDYKSQ 488
KLV + KN E ++ + ++I + T +KR+N L + T+ R YDYK +
Sbjct: 156 KLVQTLNRRKN-KERRETRKIRIVASMLTSSTFSMKKKRKNEGLDFKHETFPRDYDYKEK 214
Query: 489 S 491
+
Sbjct: 215 T 215
>Z66515-10|CAI70410.1| 510|Caenorhabditis elegans Hypothetical
protein R53.1b protein.
Length = 510
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 513 KDCTIMIHLLTLYLDQ 560
KDCT+++HLL L +D+
Sbjct: 328 KDCTVLLHLLRLKVDE 343
>Z66515-9|CAA91346.1| 519|Caenorhabditis elegans Hypothetical
protein R53.1a protein.
Length = 519
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 513 KDCTIMIHLLTLYLDQ 560
KDCT+++HLL L +D+
Sbjct: 337 KDCTVLLHLLRLKVDE 352
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 342 DKNPNEAKQEKFLKITEAYETLKDPEKRRNY 434
D+N + K E FL + +AYE L D K Y
Sbjct: 75 DQNDSAMKCEAFLNLAKAYERLADFTKALQY 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,435,432
Number of Sequences: 27780
Number of extensions: 272932
Number of successful extensions: 847
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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