Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0507
         (729 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0LQP0 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  

>UniRef50_Q0LQP0 Cluster: Putative uncharacterized protein; n=1;
           Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
           uncharacterized protein - Herpetosiphon aurantiacus ATCC
           23779
          Length = 394

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = +1

Query: 100 CLRFHITHSLNKHRILWRSNFSFIFGNGLNLDNDSL 207
           C+ FH+    ++HRI+W     F+ G+G+++ +D+L
Sbjct: 309 CMVFHMEAGSSQHRIIWHPQPGFL-GSGISVQDDTL 343


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,398,834
Number of Sequences: 1657284
Number of extensions: 10018834
Number of successful extensions: 13580
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 13240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13577
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)