Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0506
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    26   0.30 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.40 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.40 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.7  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   8.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.7  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 19/83 (22%), Positives = 40/83 (48%)
 Frame = +3

Query: 261 LTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHPIIFLKDVR 440
           ++ ++ + +   A+C + L CD    ++ QT+   C    E  F + SH    +++   +
Sbjct: 275 ISSLVQTAITLVAMCGLVLICDSAKSESQQTVF-LCYKLMEK-FPERSHEQQELYMA-AQ 331

Query: 441 FAEMKSLLDFMYKGEVNVGQNML 509
             E KS+ +F   G  +V ++ L
Sbjct: 332 VIE-KSVANFTAAGFFDVKRSTL 353


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -2

Query: 491 IYFPLIHKIQ*RFHLCKSYIFKEYNGMWMRILQEYAFKIW 372
           +  P + ++Q  + L  +Y+  E  G W+R +++  +K+W
Sbjct: 111 VSLPEVERVQWIWLLIFAYLIPEV-GTWIRAVRKCLYKLW 149


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -2

Query: 491 IYFPLIHKIQ*RFHLCKSYIFKEYNGMWMRILQEYAFKIW 372
           +  P + ++Q  + L  +Y+  E  G W+R +++  +K+W
Sbjct: 111 VSLPEVERVQWIWLLIFAYLIPEV-GTWIRAVRKCLYKLW 149


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 635 TPRGIGSPRPPLASIALPT 579
           TP    SP PP    A PT
Sbjct: 38  TPNSAASPAPPEEEAASPT 56


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 204 ISTNNGPAILLALEQPPNNLTDVLASLL 287
           IST   P  +L    PPN L  V + LL
Sbjct: 336 ISTGFSPYEILYGRTPPNPLDAVTSGLL 363


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 440 SYIFKEYNGMWMRILQEYA 384
           +++ K Y   W +IL +YA
Sbjct: 93  AFVQKNYPKEWNKILHQYA 111


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 25  LKCLIDIEMTLIIQSFMFL 81
           ++C + + +TLI+  F FL
Sbjct: 93  IECFVMMALTLIVTLFTFL 111


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 25  LKCLIDIEMTLIIQSFMFL 81
           ++C + + +TLI+  F FL
Sbjct: 93  IECFVMMALTLIVTLFTFL 111


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 300 LCDVTLACDGETVKAHQTILSACSPY 377
           LCD +   +G T + H T  +   PY
Sbjct: 64  LCDSSPCLNGATCQDHTTHYTCHCPY 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,301
Number of Sequences: 336
Number of extensions: 3443
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)