Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0506
(639 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0) 60 1e-09
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 59 3e-09
SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 55 6e-08
SB_8385| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 51 9e-07
SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0) 50 1e-06
SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0) 50 1e-06
SB_33725| Best HMM Match : Kelch_1 (HMM E-Value=3.59994e-42) 49 3e-06
SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36) 48 6e-06
SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 48 9e-06
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 46 2e-05
SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 45 5e-05
SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) 44 8e-05
SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0) 44 1e-04
SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0) 44 1e-04
SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 44 1e-04
SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_38405| Best HMM Match : BACK (HMM E-Value=0) 43 2e-04
SB_18403| Best HMM Match : BACK (HMM E-Value=0) 43 2e-04
SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45) 43 2e-04
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36) 42 6e-04
SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42) 42 6e-04
SB_40807| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 40 0.002
SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18) 40 0.002
SB_33388| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0) 36 0.028
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 35 0.049
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.049
SB_30894| Best HMM Match : BTB (HMM E-Value=3.1e-14) 35 0.049
SB_27263| Best HMM Match : Kelch_1 (HMM E-Value=2.10055e-42) 35 0.049
SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30) 32 0.45
SB_46137| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10) 31 0.60
SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13) 31 0.79
SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30) 31 1.0
SB_1926| Best HMM Match : PH (HMM E-Value=1.4e-23) 31 1.0
SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14) 31 1.0
SB_1012| Best HMM Match : ORC6 (HMM E-Value=2.9) 30 1.4
SB_6324| Best HMM Match : MCM (HMM E-Value=0) 29 2.4
SB_24335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_58957| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_35755| Best HMM Match : RVT_1 (HMM E-Value=1.90001e-40) 28 5.6
SB_35248| Best HMM Match : DUF999 (HMM E-Value=2.7) 28 5.6
SB_57527| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_47325| Best HMM Match : RVT_1 (HMM E-Value=2.2e-31) 28 5.6
SB_33707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_3393| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=0.012) 28 7.4
SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23) 28 7.4
SB_42434| Best HMM Match : RVT_1 (HMM E-Value=2.7e-18) 28 7.4
SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_21588| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_384| Best HMM Match : IBR (HMM E-Value=1.1e-12) 27 9.7
>SB_2676| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 645
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +3
Query: 273 LASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIFLKDVRFA 446
L L QR+ LCDV L + AH+ +LSACS YF+++F N +I++K +
Sbjct: 22 LNQLRQRKELCDVELCVGNVQISAHRVVLSACSAYFDAMFTGNLLESKKQVIYIKGIDET 81
Query: 447 EMKSLLDFMYKGEVNVGQNMLQ 512
++ L+DF Y G+ + Q +Q
Sbjct: 82 ALQLLVDFAYTGKAEITQENVQ 103
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +3
Query: 243 EQPPNNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHP 416
++ P D L +L Q E LCDV + T+ AH+ +L+ACSPYF ++F +
Sbjct: 39 DRHPKQTLDSLEALRQCEELCDVVIKVGSSTIHAHRVVLAACSPYFRAMFTREMAESRQA 98
Query: 417 IIFLKDVRFAEMKSLLDFMYKGEVNVGQNMLQ 512
I ++DV + M L+ F Y + + + +Q
Sbjct: 99 EITIRDVDESAMNLLITFAYTASITIEETNVQ 130
>SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 625
Score = 54.8 bits (126), Expect = 6e-08
Identities = 25/101 (24%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +3
Query: 252 PNNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIF 425
P+ +L LL++E LCDVT+ ++ H+ +L++CS YF S+F + +I
Sbjct: 17 PSQAFTILTQLLEQEKLCDVTIKAGERKIRCHRVVLASCSAYFHSMFTNSMLESSQEVIT 76
Query: 426 LKDVRFAEMKSLLDFMYKGEVNVGQNMLQCS*KLQKVYKLE 548
++ + + L++FMY ++ + + ++ V++L+
Sbjct: 77 IQGLSEKSVIQLINFMYTRKITITIDNIESLLTASAVFQLD 117
>SB_8385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 NNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFL--QNSHPHPIIFL 428
N V+ SL Q+ LCDV L + AH+ +L++ SPYF ++F + ++ L
Sbjct: 25 NKAFQVMNSLRQQNMLCDVVLKAGSIEIPAHRVVLASSSPYFFAMFTGELSESRQTVVTL 84
Query: 429 KDVRFAEMKSLLDFMYKGEVNVGQNMLQ 512
K++ ++ L++F+Y E+ V ++ +Q
Sbjct: 85 KEIDSLALELLIEFVYIAEIEVTEDNVQ 112
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 300 LCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIFLKDVRFAEMKSLLDFM 473
LCDV L D E + +H+ +L+A SPYF ++F N I L D+ ++ ++++
Sbjct: 32 LCDVLLCVDDEEIPSHKLVLAASSPYFRAMFTSNLLECTQRTITLYDIDVGALQQIVEYF 91
Query: 474 YKGEVNVGQNMLQ 512
Y G++ + ++ +Q
Sbjct: 92 YTGKITIDEDNVQ 104
>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 587
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +3
Query: 300 LCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIFLKDVRFAEMKSLLDFM 473
LCDVTL +G+ AH+ +L+A S YF +F P + L+++R + M +L ++
Sbjct: 29 LCDVTLVVEGKEFPAHRIVLAASSKYFYGLFTSEMIEKNAPSVKLQELRASVMNHILTYL 88
Query: 474 YKGEVNV 494
Y GE+ V
Sbjct: 89 YTGEITV 95
>SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 548
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Frame = +3
Query: 261 LTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESI----FLQNSHPHPIIFL 428
L L + LC+VT+ +G+ AH+ +L+A SPYF ++ F + + P+I L
Sbjct: 36 LMQCLNDFRKHNVLCEVTIVVNGKPFYAHRNVLAAASPYFRAMFSSHFREQNESKPVI-L 94
Query: 429 KDVRFAEMKSLLDFMYKGEVNV 494
+++ M+ LL+F+Y G + +
Sbjct: 95 ENITADVMEELLNFIYAGTIKI 116
>SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 570
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Frame = +3
Query: 261 LTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESI----FLQNSHPHPIIFL 428
L L + LC+VT+ +G+ AH+ +L+A SPYF ++ F + + P+I L
Sbjct: 36 LMQCLNDFRKHNVLCEVTIVVNGKPFYAHRNVLAAASPYFRAMFSSHFREQNESKPVI-L 94
Query: 429 KDVRFAEMKSLLDFMYKGEVNV 494
+++ M+ LL+F+Y G + +
Sbjct: 95 ENITADVMEELLNFIYAGTIKI 116
>SB_33725| Best HMM Match : Kelch_1 (HMM E-Value=3.59994e-42)
Length = 635
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/69 (33%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Frame = +3
Query: 297 ALCDVTLACDGETVKAHQTILSACSPYFESIF---LQNSHPHPIIFLKDVRFAEMKSLLD 467
+LCDV L +G T AH+ +L+A SP+F +F ++ + I+ LK V+ + M+++L+
Sbjct: 32 SLCDVDLMVEGLTFSAHRLVLAAGSPFFHGLFTTEMKEKQENKIV-LKQVKASVMENVLE 90
Query: 468 FMYKGEVNV 494
++Y G+ ++
Sbjct: 91 YLYTGKTSL 99
>SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36)
Length = 574
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 288 QREALCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIFLKDVRFAEMKSL 461
Q + LCDV L + E AH+ IL+A S YF ++F + + LK ++ + +K +
Sbjct: 36 QSKILCDVVLLVENEEFSAHKGILAANSHYFMAMFTTDMIEKEQERVILKKLKPSVVKEI 95
Query: 462 LDFMYKGEVNV 494
LDF+Y G + +
Sbjct: 96 LDFLYTGRIEI 106
>SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 258 NLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFL--QNSHPHPIIFLK 431
N+ + L +L Q +CDVT+ + +H+ IL+A S YF S+F + I LK
Sbjct: 21 NVLETLRTLFQGRKMCDVTVVVGKMEIPSHRLILAANSSYFYSMFTSGMSETAQNRINLK 80
Query: 432 DVRFAEMKSLLDFMYKGEVNVGQNMLQ 512
+V ++ L+++ Y + + +N +Q
Sbjct: 81 EVDATVVRQLIEYCYTSTIEINENNVQ 107
>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 481
Score = 47.6 bits (108), Expect = 9e-06
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +3
Query: 270 VLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIF---LQNSHPHPIIFLKDVR 440
V+ L R+ LCDVTL + AH+ +L++ S YF+++F L S + L+DV
Sbjct: 36 VMDDLRGRKQLCDVTLCVGERQIVAHRLVLASFSSYFQAMFTGGLVESFEDSVT-LRDVD 94
Query: 441 FAEMKSLLDFMYKGEVNVGQNMLQCS*KLQKVYKLEV*QR 560
++ L+DF Y G++++ +Q +++L Q+
Sbjct: 95 SGAVELLVDFAYTGKLDITTENVQSIMYASSLFQLNAIQK 134
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +3
Query: 273 LASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIF---LQNSHPHPIIFLKDVRF 443
L L + +CD L + + H+ ++SA SPYFE +F L+ S+ + ++ +
Sbjct: 24 LQHLRRLNTMCDAVLKVEEKQFPIHKIVVSASSPYFEVLFSGGLRESYLDTVT-IQGIDS 82
Query: 444 AEMKSLLDFMYKGEVNVGQNMLQ 512
+LLDF+Y G +NV + +Q
Sbjct: 83 ETFSALLDFIYTGVINVNEENVQ 105
>SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 300 LCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIFLKDVRFAEMKSLLDFM 473
LCDV L D ++ H+ +L++CS YF ++F II +KD+ M+ L++F
Sbjct: 11 LCDVVLRIDEQSYAGHRAVLASCSAYFYAMFNGELAESKQKIITMKDILPDYMQVLVEFA 70
Query: 474 YKGEVNV 494
Y G V +
Sbjct: 71 YTGRVEI 77
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 297 ALCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIFLKDVRFAEMKSLLDF 470
A+CDV + + AH+ ILSA S YF ++F N ++ + V M+S+L+F
Sbjct: 32 AMCDVVIKAEDTEFLAHRNILSASSDYFFAMFNGNMKESSQDVVTITGVTPDSMRSILNF 91
Query: 471 MYKGEV 488
+Y GE+
Sbjct: 92 IYTGEI 97
>SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)
Length = 518
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +3
Query: 255 NNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESI 389
N V L L DVTL GE +KAH+ +L+ACSPYF ++
Sbjct: 23 NEAFSVFKELRDDGELLDVTLHVQGEEIKAHRVVLAACSPYFRAM 67
>SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 651
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 228 ILLALEQPPNNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSH 407
+L + P + L L E LCDVTL ++ +H+ +L+ SPYF ++ +
Sbjct: 7 LLFCVPDFPTKVFSSLNELRSEEKLCDVTLVVKDRSLVSHRVVLAGWSPYFHAMLTGDML 66
Query: 408 PHPI--IFLKDVRFAEMKSLLDFMYKGEVNV 494
+ + + + A ++ L++F Y G +
Sbjct: 67 ESRLEKVTIHGIECAALEELINFCYTGRTEI 97
>SB_36233| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 300 LCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHP--IIFLKDVRFAEMKSLLDFM 473
LCDVTL + AH+ IL+A SPYF ++F + I L +V M+ +L ++
Sbjct: 25 LCDVTLNVNEVLFHAHRNILAASSPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYL 84
Query: 474 YKGEVNVGQN 503
Y G V V ++
Sbjct: 85 YSGSVVVEES 94
>SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 NNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHPI--IFL 428
N ++ L ++ LCDV L G + H+ +L+ S Y ++F + I L
Sbjct: 14 NEALQMMNELRKKRELCDVLLHVGGREFRGHRIVLAGASSYLRAMFTNGMLESGMRDIKL 73
Query: 429 KDVRFAEMKSLLDFMYKGEVNVGQNMLQ 512
+ + A M+ LLDF+Y G V++ +Q
Sbjct: 74 QGIDPAVMEILLDFVYTGIVDISVENVQ 101
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 300 LCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHP--IIFLKDVRFAEMKSLLDFM 473
LCDVTL + AH+ IL+A SPYF ++F + I L +V M+ +L ++
Sbjct: 1394 LCDVTLNVNEVLFHAHRNILAASSPYFRALFTSEMRENQGNEIKLNNVDVEIMEDILAYL 1453
Query: 474 YKGEVNV 494
Y G V V
Sbjct: 1454 YSGSVVV 1460
>SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 258 NLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHP--HPIIFLK 431
++ D L SL + LCD + G+T H+ +L A SP+F +F + I L+
Sbjct: 20 SILDRLNSLRKENVLCDAVIQIGGKTHPVHKNVLCAASPFFRGLFTNDMQEKNQEHIELQ 79
Query: 432 DVRFAEMKSLLDFMYKGEVNVGQNMLQ 512
+ + ++ FMY G + V + Q
Sbjct: 80 VISGDVGEEVISFMYTGAIKVEKENAQ 106
>SB_38405| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 300 LCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIFLKDVRFAEMKSLLDFM 473
LCDV L + AH+ +L+ACS YF ++F I L+ ++ M+ L++F
Sbjct: 41 LCDVVLLVGDRRIYAHRLVLAACSQYFHAMFTSELLESRQKEISLQGLQPDAMELLVEFA 100
Query: 474 YKGEVNVGQNMLQCS*KLQKVYKLE 548
Y + V ++ +Q + +LE
Sbjct: 101 YTARIQVSEDNVQALLPAASLLQLE 125
>SB_18403| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +3
Query: 300 LCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIFLKDVRFAEMKSLLDFM 473
LCDV L + AH+ +L+ACS YF ++F I L+ ++ M+ L++F
Sbjct: 41 LCDVVLLVGDRRIYAHRLVLAACSQYFHAMFTSELLESRQKEISLQGLQPDAMELLVEFA 100
Query: 474 YKGEVNVGQNMLQCS*KLQKVYKLE 548
Y + V ++ +Q + +LE
Sbjct: 101 YTARIQVSEDNVQALLPAASLLQLE 125
>SB_49585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Frame = +3
Query: 267 DVLASL--LQREA-LCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIFLK 431
D+L S+ L+++ LCDV L + + AH+ +L++CS YF ++F + +I L+
Sbjct: 23 DILTSVNKLRKDGKLCDVVLQVEKKEFPAHRIVLASCSDYFYAMFTNDMLESQKGVIELQ 82
Query: 432 DVRFAEMKSLLDFMYKGEVNV 494
+ M+ LLDF+Y V +
Sbjct: 83 GLASDTMEVLLDFVYTETVKL 103
>SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45)
Length = 554
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 303 CDVTLAC-DGETVKAHQTILSACSPYFESIFL--QNSHPHPIIFLKDVRFAEMKSLLDFM 473
CDV L DG+ + AH+ +LSA S YF ++FL I ++ + M +L++F
Sbjct: 26 CDVVLMTEDGQEIDAHKLVLSASSEYFRAMFLTDMKESQQKFITIRAIDSQSMTTLVEFA 85
Query: 474 YKGEVNVGQNMLQ 512
Y V + ++
Sbjct: 86 YTSNVRINSENVE 98
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +3
Query: 258 NLTDVLASLLQREALCDVTLACDGETV-KAHQTILSACSPYFESIF-LQNSHPHPIIFLK 431
++T L + E++CD+TL E + AH+ +L+A S YF+++F + + +
Sbjct: 14 SVTSQLMQYQESESMCDITLKTTSEDIFPAHKIVLAAKSDYFKALFTTEMAEKNCQEISL 73
Query: 432 DVRFAEMKSLLDFMYKGEVNV 494
D+ +K++L ++Y G+V++
Sbjct: 74 DISTRTLKAILKYVYCGDVSL 94
>SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36)
Length = 398
Score = 41.5 bits (93), Expect = 6e-04
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +3
Query: 216 NGPAILLALEQPPNNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIF- 392
+G + AL+ P L+ + +LL D L G KAH+ IL+A SP F ++F
Sbjct: 194 SGSSHSAALKVPECRLSSHMGNLLDNATFSDTVLIAGGREFKAHKAILAARSPVFSAMFE 253
Query: 393 --LQNSHPHPIIFLKDVRFAEMKSLLDFMYKGEVNVGQNM 506
++ S + L D+ + +L F+Y G Q M
Sbjct: 254 HEMEESRKGRVEIL-DIDPDVFQEMLKFVYTGNTPQIQGM 292
>SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42)
Length = 603
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 303 CDVTLACDGETVKAHQTILSACSPYFESIFLQNSHP--HPIIFLKDVRFAEMKSLLDFMY 476
CDV L +G+ AH+ +L+A S +F ++F I L + + S+LDF Y
Sbjct: 52 CDVNLEVEGQVFAAHRCVLAANSQFFYTMFTSGMRDSNDSRIKLCSLTSGALSSILDFFY 111
Query: 477 KGEVNVGQN 503
E+N+ ++
Sbjct: 112 TREINISRD 120
>SB_40807| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +3
Query: 246 QPPNNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHPIIF 425
QP ++L LL+ DV L G A++ ILSA YF+ +F S+ P+ +
Sbjct: 93 QPVSSLKKDFQELLENAYCSDVVLLYSGSRFHANKAILSARCSYFKDMFSDESN-QPLTY 151
Query: 426 LKDVRFAEMK-----SLLDFMYKGE 485
D+ E+ SLL ++Y G+
Sbjct: 152 SVDIPVEEISTGMFASLLQYLYTGD 176
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 336 VKAHQTILSACSPYFESIFLQNSHPHPII 422
V H+ +L A SPYF S+ L+ P++
Sbjct: 244 VPCHKAVLCARSPYFRSLLLKKDSSFPVL 272
>SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = +3
Query: 255 NNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHPIIFLKD 434
+ L L S E LCDVTL + + H+ +L+A SPYF +F+ + ++K+
Sbjct: 32 DELCAFLQSQRNDEVLCDVTLRHNERRIPCHKVVLAARSPYFRHLFINSESGQ---YVKN 88
Query: 435 VRFAEMKSLL------DFMYKGEVN 491
V S+L +++Y G+++
Sbjct: 89 VELPSYFSILAVDEVINYLYSGKLH 113
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 300 LCDVTLACDGETVKAHQTILSACSPYFESIFLQN-SHPHPIIFLKDVRFAEMKSLLDFMY 476
L DV L DG AH+ IL+A S YF ++F + + + ++++ M+ LL F+Y
Sbjct: 33 LTDVVLIVDGHEFPAHKNILAASSDYFMAMFSGHMATVDRTVVVQEITSTAMEVLLAFIY 92
Query: 477 KGEVNVGQNMLQ 512
+G++ + + ++
Sbjct: 93 QGKLLITEENVE 104
>SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18)
Length = 123
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +3
Query: 270 VLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSH---PHPIIFLKDVR 440
VL + CD+TL + AH+ +L+A SPYF + L ++ + ++
Sbjct: 30 VLNEMRTNSEHCDITLKAGNLVLSAHRVVLAALSPYFRELLLPTNNEKAEKEYVMPDSLK 89
Query: 441 FAEMKSLLDFMYKGEVNVGQNMLQ 512
+ ++L+F Y G + + ++
Sbjct: 90 PGAVVAMLEFFYSGTLQINLKSIE 113
>SB_33388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 303 CDVTLACDGETVKAHQTILSACSPYFESIFL--QNSHPHPIIFLKDVRFAEMKSLLDFMY 476
CDV L +G H+ +L+A SP+F ++F + L+ ++ M+S+L+F Y
Sbjct: 56 CDVILQVEGRHYPVHRCVLAANSPFFYTMFNSGMKESMQQTLQLQSIKAKAMESILEFFY 115
Query: 477 KGEVNVGQNML 509
E+ + ++ L
Sbjct: 116 TQEIVLEEDEL 126
>SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 300 LCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIFLKDVRFAEMKSLLDFM 473
LCD+ + + ++AH+ +L++ S YF ++F + + L D+ A +++L+ +
Sbjct: 33 LCDIKIVIGDKRIRAHKLVLASFSDYFSAMFTGDMAETSQNTVHLTDMDPAAVQALISYS 92
Query: 474 YKGEVNV 494
Y E+ +
Sbjct: 93 YTSEIEI 99
>SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 300 LCDVTLACDGETVKAHQTILSACSPYFESIFLQN--SHPHPIIFLKDVRFAEMKSLLDFM 473
LCDV L AH+ +L A S +F +F + + LK M+ LL ++
Sbjct: 20 LCDVELIVGNNRFAAHKNVLCASSIFFNGLFSSSMRERQENTVNLKQFPVNIMEDLLTYL 79
Query: 474 YKGEVNVGQNMLQ 512
Y G++ V + Q
Sbjct: 80 YTGKLEVTEATAQ 92
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 35.1 bits (77), Expect = 0.049
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +3
Query: 324 DGETVK--AHQTILSACSPYFESIFLQN-SHPHPIIFLKDVRFAEMKSLLDFMYKGE-VN 491
DG V+ AH+ +LS SP FE++F N + P + L D + LL ++Y + V
Sbjct: 37 DGTEVRFPAHKFVLSVSSPVFEAMFFGNLAESGPTVRLPDCTVDGFQELLRYLYCDQVVF 96
Query: 492 VGQNML 509
G+N+L
Sbjct: 97 TGKNVL 102
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 35.1 bits (77), Expect = 0.049
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 261 LTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIF---LQNSHPHPIIFLK 431
L+ +L Q L DVT + AH+ IL+A S YF ++ ++ ++P I +
Sbjct: 18 LSSQSGTLYQSRELTDVTFIVEKTKFTAHRVILAARSEYFRALLFGGMREANPGIEIEVA 77
Query: 432 DVRFAEMKSLLDFMYKGEV 488
D +LL ++Y G++
Sbjct: 78 DASSIAFDALLRYIYTGKM 96
>SB_30894| Best HMM Match : BTB (HMM E-Value=3.1e-14)
Length = 159
Score = 35.1 bits (77), Expect = 0.049
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 276 ASLLQREALCDVTLACDGETVKAHQTILSACSPYF-ESIFLQNSHPHPIIFLK-DVRFAE 449
A L + LCDV + KAH I+S S YF + + + I LK +
Sbjct: 35 AQLRKEHILCDVEVIVSDGVSKAHGVIISIGSEYFRDRLTAIACRENKRIELKYKITKGT 94
Query: 450 MKSLLDFMYKGEVNVGQN 503
++++LDF+Y G + + ++
Sbjct: 95 LENVLDFLYSGNIKITES 112
>SB_27263| Best HMM Match : Kelch_1 (HMM E-Value=2.10055e-42)
Length = 559
Score = 35.1 bits (77), Expect = 0.049
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 276 ASLLQREALCDVTLACDGETVKAHQTILSACSPYF-ESIFLQNSHPHPIIFLK-DVRFAE 449
A L + LCDV + KAH I+S S YF + + + I LK +
Sbjct: 47 AQLRKEHILCDVEVIVSDGVSKAHGVIISIGSEYFRDRLTAIACRENKRIELKYKITKGT 106
Query: 450 MKSLLDFMYKGEVNVGQN 503
++++LDF+Y G + + ++
Sbjct: 107 LENVLDFLYSGNIKITES 124
>SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +3
Query: 276 ASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFL----QNSHPH-PIIFLKDVR 440
A + + + DVT +GE H+ IL+ SP F+ + +NS H P I + D++
Sbjct: 481 ADYVNNQEMSDVTFVVEGEPFYGHKIILATASPRFKQMLTIKPSENSEGHVPCIEITDIK 540
Query: 441 F 443
+
Sbjct: 541 Y 541
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 312 TLACDGETVKAHQTILSACSPYFESIFL 395
T + + T+ AHQTILSA SP F +FL
Sbjct: 255 TFSGNAPTLHAHQTILSAASPIFRELFL 282
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Frame = +3
Query: 273 LASLLQREALCDVTLACDG--ETVKAHQTILSACSPYFESIF--LQNSHPHPIIFLKDVR 440
L + +RE LCDV + D AH+ +L+A S YF ++ + L +
Sbjct: 3573 LNEMRKREFLCDVIILADNGCRRFPAHRAVLAASSRYFHKLYNGTTLARYSRETILSGIC 3632
Query: 441 FAEMKSLLDFMYKGEVNV-GQNM 506
E+++++ ++Y EV + G N+
Sbjct: 3633 DRELETVVHYIYTSEVCIDGDNV 3655
>SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30)
Length = 176
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 303 CDVTLACDGETVKAHQTILSACSPYFESIF---LQNSHPHPIIFLKDVRFAEMKSLLDFM 473
CDVTL ++ H+ +L+A S YF ++F S + ++ L D+ + +++ +
Sbjct: 33 CDVTLKVTDQSFPGHKLVLAANSTYFRAMFGEGFVESSKNDVV-LHDLDPKGVNAVISYF 91
Query: 474 YKGEVNV 494
Y ++ +
Sbjct: 92 YNSKIEI 98
>SB_46137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = +3
Query: 243 EQPPNNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHPII 422
E L ++L + CDV L + AH+ ILSA P S L + I
Sbjct: 18 ENHEKRLLELLNEQRKATKFCDVLLEVGDSEIAAHRAILSASIPVL-SERLSDRKEGLKI 76
Query: 423 FLKDVRFAEMKSLLDFMYKGEVNV 494
L+ ++ +K+++D++Y ++V
Sbjct: 77 KLEGLQHNAVKAIVDYLYTSCLDV 100
>SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10)
Length = 262
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 195 FTDISTNNGPAILLALEQPPNNLTDVLASLLQREALCDVTLACDGETVKAHQTILS 362
FTD+ N A L+ EQPP ++++ E+LC + E VK ++ +S
Sbjct: 127 FTDLDYNTMMASLIGEEQPPLIAVSDTPAIMEVESLCSLIRGGVDEDVKYNEAYIS 182
>SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13)
Length = 133
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +3
Query: 324 DGETVK--AHQTILSACSPYFESIFL-QNSHPHPIIFLKDVRFAEMKSLLDFMYKGEV 488
DGE V AH+ +L+ SP FE++F + + I L D + + +L ++Y+ EV
Sbjct: 4 DGEKVSIPAHKYVLATSSPVFEAMFFGKLAETSRNITLPDCFYEGVLEMLRYLYRDEV 61
>SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 30.7 bits (66), Expect = 1.0
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +3
Query: 324 DGETVK--AHQTILSACSPYFESIFL-QNSHPHPIIFLKDVRFAEMKSLLDFMYKGEVNV 494
DGE V AH+ +L+ SP FE++F + + I L D M +L F+Y E+
Sbjct: 35 DGEKVSIPAHKYVLATSSPVFEAMFFGKLAETGFTIALPDCSAEGMLEMLRFIYTEEIRF 94
Query: 495 GQNMLQCS*KLQKVYKLEV*QRTIH 569
N+ L K Y L + H
Sbjct: 95 TINIAVEVLYLAKKYILPCLEERCH 119
>SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30)
Length = 619
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 303 CDVTLACDGETVKAHQTILSACSPYFESIF 392
CDVTL ++ H+ +L+A S YF ++F
Sbjct: 75 CDVTLKVTDQSFPGHKLVLAANSTYFRAMF 104
>SB_1926| Best HMM Match : PH (HMM E-Value=1.4e-23)
Length = 998
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +3
Query: 255 NNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYF 380
+ L +A L ++ D+T++ G+ +KAH+ +L+A S ++
Sbjct: 754 SRLLKTVADLYDKDLYSDITVSFGGQKIKAHKFVLAARSDHW 795
>SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14)
Length = 1774
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 491 CWPKYAPMFLKTAESLQVRGLTENNTLNPKSEERSTPVVGAEN 619
C P P T +S V LTEN++ +S STP G N
Sbjct: 1383 CTPLTQPAITHTQQSGDVIDLTENDSSRDESSRESTPERGTRN 1425
>SB_1012| Best HMM Match : ORC6 (HMM E-Value=2.9)
Length = 1108
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 268 MCLRVFCKERLSVMSLSLVMERQSRHTRQYYQHAHHILKAYSCKIRIHIPLYSLKMYDLQ 447
+ L + CK+R+++ L ++ TR Y+ A HIL CK R+ IP+ L + +
Sbjct: 66 LALHILCKQRMTIPVRRLTLDGM---TRVYHVLALHIL----CKQRMTIPVRKLTLEGMT 118
Query: 448 R 450
R
Sbjct: 119 R 119
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 268 MCLRVFCKERLSVMSLSLVMERQSRHTRQYYQHAHHILKAYSCKIRIHIPLYSLKMYDLQ 447
+ L + CK+R+++ L ++ TR Y+ A HIL CK R+ IP+ L + +
Sbjct: 395 LALHILCKQRMTIPVRKLTLDGM---TRVYHALALHIL----CKQRMTIPVRRLTLDGMT 447
Query: 448 R 450
R
Sbjct: 448 R 448
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 268 MCLRVFCKERLSVMSLSLVMERQSRHTRQYYQHAHHILKAYSCKIRIHIPLYSLKMYDLQ 447
+ L + CK+R+++ L ++ TR Y+ A HIL CK R+ IP+ L + +
Sbjct: 537 LALHILCKQRMTIPVRRLTLDGM---TRVYHVLALHIL----CKQRMTIPVRRLTLEGMT 589
Query: 448 R 450
R
Sbjct: 590 R 590
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 268 MCLRVFCKERLSVMSLSLVMERQSRHTRQYYQHAHHILKAYSCKIRIHIPLYSLKMYDLQ 447
+ L + CK+R+++ L +E TR Y+ A HIL CK R I + L + +
Sbjct: 95 LALHILCKQRMTIPVRKLTLEGM---TRVYHAFALHIL----CKQRKTISVRRLTLDGMT 147
Query: 448 R 450
R
Sbjct: 148 R 148
>SB_6324| Best HMM Match : MCM (HMM E-Value=0)
Length = 1592
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 319 LVMERQSRHTRQYYQHAHHILKAYSCKIRIHIPLYS 426
L+ ERQ R RQ Q A KA S + H P+++
Sbjct: 1110 LLYERQRRRRRQQEQRARSREKASSANVERHFPIFT 1145
>SB_24335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 614 PRPPLASIALPTSDSMYCS 558
P PP++S ALP SD++ C+
Sbjct: 86 PSPPVSSAALPNSDNLVCN 104
>SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 255 NNLTDVLASLLQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHPIIFLKD 434
N + L L+ DV G+ AH+ IL+ S YF S+F +I LK+
Sbjct: 74 NPYYEFLRRTLESGDFADVCFVIHGQRFCAHRAILTTRSSYFASMFETKWKDKHVITLKN 133
>SB_58957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 285 LQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHPI--IFLKDVRFAEMKS 458
L + L D+T G +V AH+ +L S ++ + + I L DV A
Sbjct: 65 LNKALLSDITFVVKGVSVPAHRVVLITRSAVMAAMLDGKFRENDLAMIELPDVPLAPFLI 124
Query: 459 LLDFMYKGEVNV 494
LL+++Y N+
Sbjct: 125 LLEYIYTDSCNL 136
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 285 LQREALCDVTLACDGETVKAHQTILSACSPYFESIFLQNSHPHPI--IFLKDVRFAEMKS 458
L + L D+T G +V AH+ +L S ++ + + I L DV A
Sbjct: 287 LNKALLSDITFVVKGVSVPAHRVVLITRSAVMAAMLDGKFRENDLAMIELPDVPLAPFLI 346
Query: 459 LLDFMYKGEVNV 494
LL+++Y N+
Sbjct: 347 LLEYIYTDSCNL 358
>SB_35755| Best HMM Match : RVT_1 (HMM E-Value=1.90001e-40)
Length = 414
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 326 WRDSQGTPDNIISMLTIF*KHIPAKFASTSHYI 424
+R QGT D+I ++ ++ KH+ AK T++++
Sbjct: 60 FRKEQGTIDSIFALKSLIDKHVKAKPQKTNNFL 92
>SB_35248| Best HMM Match : DUF999 (HMM E-Value=2.7)
Length = 189
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 326 WRDSQGTPDNIISMLTIF*KHIPAKFASTSHYI 424
+R QGT D+I ++ ++ KH+ AK T++++
Sbjct: 60 FRKEQGTIDSIFALKSLIDKHVKAKPKKTNNFL 92
>SB_57527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 326 WRDSQGTPDNIISMLTIF*KHIPAKFASTSHYI 424
+R QGT D+I ++ ++ KH+ AK T++++
Sbjct: 60 FRKEQGTIDSIFALKSLIDKHVKAKPQKTNNFL 92
>SB_47325| Best HMM Match : RVT_1 (HMM E-Value=2.2e-31)
Length = 300
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 326 WRDSQGTPDNIISMLTIF*KHIPAKFASTSHYI 424
+R QGT D+I ++ ++ KH+ AK T++++
Sbjct: 60 FRKEQGTIDSIFALKSLIDKHVKAKPKKTNNFL 92
>SB_33707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 368
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +2
Query: 326 WRDSQGTPDNIISMLTIF*KHIPAKFASTSHYI 424
+R QGT D++ ++ ++ KH+ AK T++++
Sbjct: 60 FRKEQGTIDSVFALKSLIDKHVKAKPKKTNNFL 92
>SB_3393| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=0.012)
Length = 626
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 159 HPDYLWTHKTSTFTDISTNNGPAILLALEQPPNNLTDVLA 278
HPDY W + F ++ N A+L ++Q P+ +++A
Sbjct: 28 HPDYRWVNANVNFDNV-INGFLALLQVIDQQPSYEANLIA 66
>SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23)
Length = 417
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 312 TLACDGETVKAHQTILSACSPYFESIFL-QNSHPHPIIFLKDVRFAEMKSLLDFMYKGEV 488
T A + ++ AH+ +LS SP FE++F + I L D + +L + Y EV
Sbjct: 35 TSAGEKISIPAHRYVLSVSSPVFEAMFHGAMAESSREISLPDCYAEALSEMLRYAYYDEV 94
Query: 489 NV-GQNML 509
+ G N +
Sbjct: 95 KLTGSNAM 102
>SB_42434| Best HMM Match : RVT_1 (HMM E-Value=2.7e-18)
Length = 418
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +2
Query: 326 WRDSQGTPDNIISMLTIF*KHIPAKFASTSHYI 424
+R QGT D++ ++ ++ KH+ AK T++++
Sbjct: 60 FRKEQGTIDSVFALKSLIDKHVKAKPKKTNNFL 92
>SB_38099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 613 RAHHWRRSLFRLRIQCIVLCQT 548
R HH RR LFR R +C+ + +T
Sbjct: 345 RRHHERRRLFRYRQRCVKIWRT 366
>SB_21588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 169 IYGHTKQARSLTLAPTMDQQFCL-RWNNHPTI 261
+YGH+ + + ++PT QF R +NHP +
Sbjct: 5 VYGHSVEDYDMAVSPTTAHQFMYSRGDNHPDL 36
>SB_384| Best HMM Match : IBR (HMM E-Value=1.1e-12)
Length = 259
Score = 27.5 bits (58), Expect = 9.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 421 IMGCGCEFCRNMLSKYGEHA 362
+ CGC FC+ L +Y HA
Sbjct: 39 LKSCGCFFCKECLKQYVAHA 58
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,998,588
Number of Sequences: 59808
Number of extensions: 428901
Number of successful extensions: 1149
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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