Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0505
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   9.6  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   9.6  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 146 PRHHVPLITSVNKRWRC 196
           P  +VPL  S N+ W+C
Sbjct: 160 PNGNVPLGKSCNRYWQC 176


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 124 NFLSKYSTASSCAINYVR 177
           N + KY+T+SS A +YV+
Sbjct: 817 NVMKKYTTSSSEARHYVQ 834


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 124 NFLSKYSTASSCAINYVR 177
           N + KY+T+SS A +YV+
Sbjct: 817 NVMKKYTTSSSEARHYVQ 834


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 124 NFLSKYSTASSCAINYVR 177
           N + KY+T+SS A +YV+
Sbjct: 817 NVMKKYTTSSSEARHYVQ 834


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 124 NFLSKYSTASSCAINYVR 177
           N + KY+T+SS A +YV+
Sbjct: 817 NVMKKYTTSSSEARHYVQ 834


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 137 FERKFFFCIHSI 102
           F  K FFC H I
Sbjct: 21  FNNKAFFCFHGI 32


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -2

Query: 137 FERKFFFCIHSI 102
           F  K FFC H I
Sbjct: 21  FNNKAFFCFHGI 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,729
Number of Sequences: 336
Number of extensions: 2513
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)