BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0505 (696 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces pomb... 27 1.9 SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces po... 26 5.9 SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 26 5.9 SPCC965.11c |||amino acid transporter |Schizosaccharomyces pombe... 25 7.8 >SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 162 Score = 27.5 bits (58), Expect = 1.9 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = -1 Query: 441 SEYIFEFLRYFLRQRHLLLPNISN*TYGRVKNILKH*KNLERIGFRRH*H 292 SE++ FL Y ++ N+ + + NIL H + LE+I +R+ H Sbjct: 83 SEFVQSFLTYRTFDLFDIVANLLGCSLALLLNILYHKRRLEKIRLQRYGH 132 >SPBC21C3.03 |||ABC1 kinase family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 674 Score = 25.8 bits (54), Expect = 5.9 Identities = 8/21 (38%), Positives = 15/21 (71%) Frame = +2 Query: 131 FQNILPRHHVPLITSVNKRWR 193 F I+ R+++P++ S N RW+ Sbjct: 9 FAFIIQRNYIPVVNSQNTRWK 29 >SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizosaccharomyces pombe|chr 1|||Manual Length = 637 Score = 25.8 bits (54), Expect = 5.9 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +3 Query: 246 SENTLEILLSRLLLFDVSDDENRYAPSFFNALKYSLHDH 362 +E+ + LSR+ F++ + EN AP+ FN +S H Sbjct: 517 AEDVTDQFLSRIKNFNLGEKENVSAPAKFNGSFWSKFIH 555 >SPCC965.11c |||amino acid transporter |Schizosaccharomyces pombe|chr 3|||Manual Length = 537 Score = 25.4 bits (53), Expect = 7.8 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = -1 Query: 603 YSFKQTISFIISVLYTDIQNFLIIK 529 Y F Q I F+I ++ T +Q + + K Sbjct: 436 YPFPQLIGFVIGIILTLVQGWTVFK 460 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,350,414 Number of Sequences: 5004 Number of extensions: 40568 Number of successful extensions: 82 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 82 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 321151040 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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