Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0504
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   5.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.6  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 40  YKSVNIRIQVHCSIAFVRV*EH*VHAYFLQKN 135
           Y++   R ++H  + +V V  + +  YF+Q+N
Sbjct: 125 YENQRTRSRIHLFVRYVFVTSYLLFDYFVQRN 156


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 274 YYHLQVCNKYFLHSFIRQCTVMTLVR 351
           Y+  Q+C+   LH+    C V+T+ +
Sbjct: 108 YWLHQICHICELHTIFLVCNVLTVFK 133


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 430 HILDLQLSDYYCLMMFLNLEI 368
           HI +  +S   C MM L LEI
Sbjct: 159 HICNTVISATVCFMMLLMLEI 179


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 616 FMISKTTLVNIKVTVNLSMYLKCFC 690
           F+IS  +LV++    N ++ + C C
Sbjct: 235 FLISNISLVSLIFLFNCTLIIMCDC 259


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 430 HILDLQLSDYYCLMMFLNLEI 368
           HI +  +S   C MM L LEI
Sbjct: 155 HICNTVISATVCFMMLLMLEI 175


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 548 CLYSFFQSNKRFLCSFL 498
           C+Y F+  +  F C+F+
Sbjct: 257 CIYYFYYMHLLFCCAFI 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,393
Number of Sequences: 336
Number of extensions: 3584
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)