BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0504 (722 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014134-1363|AAF52578.3| 346|Drosophila melanogaster CG33121-P... 29 8.5 >AE014134-1363|AAF52578.3| 346|Drosophila melanogaster CG33121-PA protein. Length = 346 Score = 28.7 bits (61), Expect = 8.5 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Frame = -3 Query: 294 TDLQMIISVVQTIP*INKTCS*LMSI-HCCAKSIPYNGTAVIVLRF-IRYELYYIVFLKK 121 +DL MII +P N S + I ++S+ N V + +F I+Y+ + LKK Sbjct: 197 SDLSMIIG----LPLHNTYLSSIEKILRTLSESLVENNVHVELPKFKIKYQTELVESLKK 252 Query: 120 VGMNLVLLNTDKCNGTM 70 +G++L+ NT +G + Sbjct: 253 LGIHLIFSNTSDLSGLL 269 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 26,640,025 Number of Sequences: 53049 Number of extensions: 493719 Number of successful extensions: 751 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 746 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 751 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3231892257 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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