BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0503 (725 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_06_0719 + 26612152-26612856,26613102-26613110,26614272-26615198 31 0.93 03_01_0177 + 1424773-1424850,1425307-1425391,1425498-1425577,142... 29 3.8 01_01_0977 - 7717808-7717837,7718227-7718327,7718449-7718548,771... 29 3.8 05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238 28 6.6 07_03_1670 - 28505732-28506426,28508202-28509309 28 8.7 03_05_0530 - 25306788-25306919,25307446-25308037,25308152-253089... 28 8.7 >11_06_0719 + 26612152-26612856,26613102-26613110,26614272-26615198 Length = 546 Score = 31.1 bits (67), Expect = 0.93 Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Frame = +1 Query: 25 LFICVSGAPISIQDILQIFGNPVRDFKNSFAQLSLYNSTESETIANTTTKKDEDGPS--- 195 LF+C I + PVR S ++LS S T+ T +D DG + Sbjct: 342 LFVCNHRTLIDPVYVSVALDRPVRAVSYSLSRLSELISPIGRTV-RLTRDRDSDGRAMAR 400 Query: 196 --DDTSMIEVPPNTAGCQEQGTIWIKVVFADDHGDICNIGINTGVA 327 D ++ V P C+E + +FA+ D+ +GI A Sbjct: 401 LLDGGDLVVVCPEGTTCREPCLLRFSPLFAELSDDVVPVGIAVDTA 446 >03_01_0177 + 1424773-1424850,1425307-1425391,1425498-1425577, 1425771-1425898,1425962-1426049,1426187-1426277, 1426712-1426881,1427151-1427438,1427527-1427643, 1427924-1427976,1428029-1428090,1429042-1429118, 1429269-1429322,1429417-1429476,1429581-1429658, 1429805-1429851,1429933-1430051,1430280-1430364, 1430443-1430557,1430662-1430784,1430869-1430969, 1431346-1431475 Length = 742 Score = 29.1 bits (62), Expect = 3.8 Identities = 14/54 (25%), Positives = 27/54 (50%) Frame = +1 Query: 70 LQIFGNPVRDFKNSFAQLSLYNSTESETIANTTTKKDEDGPSDDTSMIEVPPNT 231 +++ G+ + K SF NST+S ++ DE+ ++D +I+ NT Sbjct: 257 IKVAGHRWKGNKTSFGDSDEENSTQSNELSELEEDGDEEESANDNELIDANVNT 310 >01_01_0977 - 7717808-7717837,7718227-7718327,7718449-7718548, 7718706-7718822,7718913-7718990,7719980-7720058, 7720184-7720249,7720373-7720441,7720890-7721188 Length = 312 Score = 29.1 bits (62), Expect = 3.8 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 3/87 (3%) Frame = -3 Query: 315 VYAYVAYITMVVCKHHFYPNSALLLASRCVRRYFNHA-SVIRRTVFI--LFGSGICYCFA 145 VYAY++ I ++VC P + ++ + ++ FN A + + T F+ LF G+ Y Sbjct: 179 VYAYISIIALIVC----IPPAVIIEGPQLLQHGFNDAIAKVGLTKFVSDLFFVGLFY-HL 233 Query: 144 FGAIIQRKLGERVFKISDGIAKYLKNI 64 + + L ERV ++ + LK + Sbjct: 234 YNQVATNTL-ERVAPLTHAVGNVLKRV 259 >05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238 Length = 490 Score = 28.3 bits (60), Expect = 6.6 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +1 Query: 118 QLSLYNSTESETIANTTTKKDEDGPSDDTSMIEVPPN 228 ++SL ST S + TTT P+ D + PPN Sbjct: 66 RISLSTSTPSPPVTTTTTTTSAPNPNPDPNPTLTPPN 102 >07_03_1670 - 28505732-28506426,28508202-28509309 Length = 600 Score = 27.9 bits (59), Expect = 8.7 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 52 ISIQDILQIFGNPVRDFKNSFAQLSLYNSTESETIANTTT 171 +++ D L++FG+ + + A+LS NST E+ A T Sbjct: 134 LALSDCLELFGHTLDLLGTAAAELSAGNSTAEESAAGVQT 173 >03_05_0530 - 25306788-25306919,25307446-25308037,25308152-25308975, 25309533-25309592,25310115-25310180,25310318-25310461, 25310616-25310756,25310898-25311056,25311818-25311884, 25311986-25312158,25312237-25312333,25312410-25312528, 25312867-25312951,25313120-25313321,25314456-25314633 Length = 1012 Score = 27.9 bits (59), Expect = 8.7 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%) Frame = +3 Query: 279 RRPW*YMQHRHKHRRGV--VCSAHYIKM---DAKFVILLTITLASVSSQGNVVFNFREK 440 R+PW ++QH H + RGV V + H +++ D K+ ++ T+ + N + EK Sbjct: 746 RQPWPWIQHGHAYWRGVLYVNTCHVMRISLSDGKYQVIKHPTVYYKKFKPNFLIGKSEK 804 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,384,924 Number of Sequences: 37544 Number of extensions: 418788 Number of successful extensions: 993 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 971 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 993 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1898162308 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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