Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0503
         (725 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g25870.1 68417.m03720 expressed protein contains Pfam profile...    30   1.4  
At2g29970.1 68415.m03645 heat shock protein-related contains sim...    29   4.1  
At1g63590.1 68414.m07188 receptor-like protein kinase-related co...    28   5.5  
At5g63710.1 68418.m07997 leucine-rich repeat transmembrane prote...    28   7.2  
At5g09210.1 68418.m01043 hypothetical protein                          28   7.2  
At4g07800.1 68417.m01233 hypothetical protein                          27   9.6  
At3g57990.1 68416.m06463 expressed protein                             27   9.6  
At1g20160.1 68414.m02521 subtilase family protein similar to sub...    27   9.6  

>At4g25870.1 68417.m03720 expressed protein contains Pfam profile
           PF03267: Arabidopsis protein of unknown function, DUF266
          Length = 389

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -1

Query: 341 C*AD-YATPVFMPMLHISPWSSANTTFIQIVPCSWHPAVFGGTSIML 204
           C AD +  P F  M+     S+ + TF+      WHP  +GG  I L
Sbjct: 278 CIADEHYLPTFFNMIDPMGISNWSVTFVDWSERRWHPKTYGGNEISL 324


>At2g29970.1 68415.m03645 heat shock protein-related contains
           similarity to 101 kDa heat shock protein; HSP101
           [Triticum aestivum] gi|11561808|gb|AAC83689
          Length = 1002

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/69 (23%), Positives = 32/69 (46%)
 Frame = +3

Query: 318 RRGVVCSAHYIKMDAKFVILLTITLASVSSQGNVVFNFREKLWFATSTTTEKVQTGQVIR 497
           + G+V +   +K+ A  V  + +    V    +++   REKLWF  S ++ +     + R
Sbjct: 301 KSGMVLNLGELKVLASDVFSVDVIEKFVLKLADLLKLHREKLWFIGSVSSNETYLKLIER 360

Query: 498 VPELSVPWD 524
            P +   W+
Sbjct: 361 FPTIDKDWN 369


>At1g63590.1 68414.m07188 receptor-like protein kinase-related
           contains Pfam PF01657: Domain of unknown function;
           similar to receptor-like protein kinase 4 (GI:13506745)
           {Arabidopsis thaliana}
          Length = 268

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 291 TMVVCKHHFYPNSALLLASRCVRRYFN 211
           T+ + K  FY  SAL++++ C+ RY N
Sbjct: 100 TLEIYKSCFYRKSALVISNECIVRYSN 126


>At5g63710.1 68418.m07997 leucine-rich repeat transmembrane protein
           kinase, putative
          Length = 614

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +1

Query: 91  VRDFKNSFAQLSLYNSTESETIANTTTKKDEDGPSDDTSMIEVP---PNTAGCQEQGTIW 261
           +RD  +S   L+ Y+S E ETI        +  P D  +M EV      T G  E+ T W
Sbjct: 518 LRDIVDS--NLTTYDSKEVETIVQVALLCTQGSPEDRPAMSEVVKMLQGTGGLAEKWTEW 575


>At5g09210.1 68418.m01043 hypothetical protein
          Length = 603

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +1

Query: 28  FICVSGAPISIQDILQIF 81
           F+CVSGA ISI+ +L IF
Sbjct: 218 FVCVSGAFISIKRLLSIF 235


>At4g07800.1 68417.m01233 hypothetical protein 
          Length = 448

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -3

Query: 297 YITMVVCKHHFYPNSALLLASRCVRRYFNHASVIRRTVFILF 172
           Y  M +CKH+ +P+    L    + R     +++R+TV   F
Sbjct: 93  YDAMAICKHYGFPDFLSRLRLDSLMRDLTERNLLRKTVAFKF 134


>At3g57990.1 68416.m06463 expressed protein
          Length = 367

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
 Frame = +1

Query: 82  GNP--VRDFKNSFAQLSLYNSTESETIANTTTKKDEDGPSDDTSMIEV--PPNTAGCQEQ 249
           GNP  +  FK  F   S+  S  S        K      S+D S IEV   P   GC   
Sbjct: 98  GNPSFMLHFKPQFGDFSIKKSHSSSGFERNLIKSMNGSVSEDDSSIEVVDTPAVNGC-GG 156

Query: 250 GTIWIKVVFADDHGDICNIGINTGVA*SAQ 339
           G   + V+ +   GDI   G+ +GV  +A+
Sbjct: 157 GFRKVTVLPSTSAGDIA--GLLSGVEVAAR 184


>At1g20160.1 68414.m02521 subtilase family protein similar to
           subtilisin-type protease precursor GI:14150446 from
           [Glycine max]
          Length = 769

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 121 LSLYNSTESETIANTTTKKDEDGPSDDTSMIEVPP 225
           +S +    S+T+  T T   EDG +  T  +E PP
Sbjct: 672 ISGFKGNGSKTVTRTVTNVGEDGEAVYTVSVETPP 706


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,929,736
Number of Sequences: 28952
Number of extensions: 345344
Number of successful extensions: 894
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)