Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0501
         (720 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0995 - 29545058-29545204,29545988-29546074,29546166-295463...    59   3e-09
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813...    28   6.5  
12_02_0683 + 22006770-22006935,22007030-22007274,22007524-220077...    28   8.6  
11_06_0542 + 24777453-24777632,24777654-24778478,24778576-247793...    28   8.6  
03_02_0752 - 10922456-10922644,10922719-10922796,10922888-109230...    28   8.6  

>03_05_0995 -
           29545058-29545204,29545988-29546074,29546166-29546361,
           29546686-29546915
          Length = 219

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 30/77 (38%), Positives = 44/77 (57%)
 Frame = +2

Query: 278 ELVQLMKWKQARGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAMTALSNLKGVGX 457
           ELV+L++WK +RGK+ P+L   +K      V   + KAF  LP++  A+T L+ LKGVG 
Sbjct: 62  ELVRLLQWKLSRGKWRPRLMDFVKGLEDAVVESASCKAFAALPDLRKAITELTVLKGVGP 121

Query: 458 XXXXXXXXXXXPEIAPF 508
                      P++APF
Sbjct: 122 ATASAVLAAYAPDVAPF 138


>02_02_0236 +
           8135641-8135795,8136167-8136557,8136640-8136931,
           8137117-8137271,8137363-8137451,8137623-8137967,
           8139046-8139169,8139424-8139581,8139673-8139757,
           8140094-8140306,8141314-8141375,8141466-8141951,
           8142472-8142568
          Length = 883

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 316 SSGLFPFHELDKFFVDHVR-ILPRDLIXLGSS 224
           S  LFP+ +L KFF   VR I PR L   G+S
Sbjct: 330 SKVLFPYEDLVKFFQYEVRGISPRGLFNCGNS 361


>12_02_0683 +
           22006770-22006935,22007030-22007274,22007524-22007727,
           22007847-22007939,22008015-22008107,22008196-22008537,
           22008675-22008737,22008812-22008892
          Length = 428

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 382 EKGLPQTAQYRIRDDRSKQSQRRGNGHSISVISCR 486
           E+G+ +T + R+R  R  Q     N  +IS++ CR
Sbjct: 393 EEGVVRTNRKRVRCSRPDQDDSMSNQRNISMVFCR 427


>11_06_0542 +
           24777453-24777632,24777654-24778478,24778576-24779319,
           24779422-24780354,24780456-24780938,24780969-24781082,
           24781240-24781636,24781732-24782024,24782392-24782802
          Length = 1459

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 114 KEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKXIKSRGKM 260
           +E D+        I + A+++ +R  E   L+N+  +EL + +KS G M
Sbjct: 190 QEHDAATSTSASIITVSADQRRRRALEPRSLENFCSDELTRWVKSVGTM 238


>03_02_0752 -
           10922456-10922644,10922719-10922796,10922888-10923016,
           10923105-10923152,10923243-10923333,10923517-10923648,
           10923869-10924086,10925121-10925271,10925360-10926009,
           10926715-10926786,10926938-10926985,10927105-10927242,
           10927750-10927756,10928064-10928212
          Length = 699

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 122 EFFCICLQKESRRVFRGSHCERSKC 48
           E +C C  K  +  FRG HC +S+C
Sbjct: 474 EKYCGC-SKSCKNRFRGCHCAKSQC 497


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,529,108
Number of Sequences: 37544
Number of extensions: 438404
Number of successful extensions: 1024
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)