BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0501 (720 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M60255-1|AAA36594.1| 527|Homo sapiens cerebroside sulfate activ... 32 1.8 D00422-1|BAA00321.1| 527|Homo sapiens sphingolipid activator pr... 31 4.1 AB209776-1|BAD93013.1| 530|Homo sapiens prosaposin variant prot... 31 4.1 >M60255-1|AAA36594.1| 527|Homo sapiens cerebroside sulfate activator protein protein. Length = 527 Score = 32.3 bits (70), Expect = 1.8 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +1 Query: 508 LADECVQAIPEMEGSDYTAREYLN-FVSHIRNVCDRLNEEQNGCGKKWFPHMVELALWTH 684 + +C+Q + +++ + T ++ V H++ CDRL K + E+A+ Sbjct: 197 VCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADISKNYISQYSEIAIQMM 256 Query: 685 NIVSDLQPQ 711 + D QP+ Sbjct: 257 MHMQDQQPK 265 >D00422-1|BAA00321.1| 527|Homo sapiens sphingolipid activator proteins protein. Length = 527 Score = 31.1 bits (67), Expect = 4.1 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +1 Query: 508 LADECVQAIPEMEGSDYTAREYLN-FVSHIRNVCDRLNEEQNGCGKKWFPHMVELALWTH 684 + +C+Q + +++ + T ++ V H++ CDRL K + E+A+ Sbjct: 197 VCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMM 256 Query: 685 NIVSDLQPQ 711 + D QP+ Sbjct: 257 MHMQDQQPK 265 >AB209776-1|BAD93013.1| 530|Homo sapiens prosaposin variant protein. Length = 530 Score = 31.1 bits (67), Expect = 4.1 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +1 Query: 508 LADECVQAIPEMEGSDYTAREYLN-FVSHIRNVCDRLNEEQNGCGKKWFPHMVELALWTH 684 + +C+Q + +++ + T ++ V H++ CDRL K + E+A+ Sbjct: 200 VCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMM 259 Query: 685 NIVSDLQPQ 711 + D QP+ Sbjct: 260 MHMQDQQPK 268 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 109,713,224 Number of Sequences: 237096 Number of extensions: 2371910 Number of successful extensions: 8411 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 8254 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8411 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8455186714 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -