Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0501
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   2.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   3.8  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    22   5.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   5.1  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    22   5.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.7  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   8.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   8.9  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 135 KLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKXI 242
           +++  A  +KA     R  EL K+D W+ +++   I
Sbjct: 253 RMFVLAASIKAGYTIDRLYELTKIDKWFLHKMKNII 288


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -3

Query: 604 RRFVCGLRN*GIPLLCNRCLPFRGSPGRIRQPKRCYFWTSGS**R*CCGRSHAFEIA 434
           + FV  LRN G+P   N      G+ G + +P   + W      + C G +  + IA
Sbjct: 76  KTFVTILRNDGVPSSLNVISNKIGNGGPLLEPYPNWSWAKN---QNCSGITSVYRIA 129



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -2

Query: 623 SSFNLSQTFRMWLTKLRYSLAV*SLPSISGIAWTHSSAKTV 501
           SS NL+       T+ ++          S I WT +SAK +
Sbjct: 268 SSHNLNYVNTKQFTQGKFQANDIQYQGASDILWTQASAKAI 308


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 281 VLRGSCAHLTPRFDLLGKFILIPIVQFYELIWS 183
           VLRG+C   +P      K +L  I + Y   WS
Sbjct: 75  VLRGACPQCSPEETRQIKKVLSHIQRTYPKEWS 107


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 359 PRAVMQETKKAFRKLPNIES 418
           PR++   TKK F K  +I++
Sbjct: 85  PRSMQDSTKKLFNKCKSIQN 104


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 281 VLRGSCAHLTPRFDLLGKFILIPIVQFYELIWS 183
           VLRG+C   +P      K +L  I + Y   WS
Sbjct: 75  VLRGACPQCSPEETRQIKKVLSHIQRTYPKEWS 107


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 290 AGQVLRGSCAHLTPRFDLLGKFI 222
           +G+V+ G   H  PR+ L G  +
Sbjct: 516 SGEVVTGVIGHRMPRYCLFGNTV 538


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 290 AGQVLRGSCAHLTPRFDLLGKFI 222
           +G+V+ G   H  PR+ L G  +
Sbjct: 516 SGEVVTGVIGHRMPRYCLFGNTV 538


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 610 YHRRFVCGLRN*GIPLLCNRCLPFRGSPGRIRQP 509
           +++ F+  +R  G+P   N      G+ GR+ QP
Sbjct: 78  HNKTFLAVIRYNGVPSSLNVVSDKTGNGGRLLQP 111


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 201 KLDNWYQNELPKXIKSRG 254
           K+DNW+ N   +   SRG
Sbjct: 401 KIDNWWDNGSNQIAFSRG 418


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,922
Number of Sequences: 438
Number of extensions: 4203
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)