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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0500
         (613 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23)                  32   0.32 
SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.97 
SB_46036| Best HMM Match : PSRT (HMM E-Value=1)                        31   0.97 
SB_17622| Best HMM Match : zf-CCHC (HMM E-Value=0.3)                   30   1.3  
SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39)          29   3.0  
SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.2  
SB_28271| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14)                 28   6.9  
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)                     27   9.1  
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)            27   9.1  
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.1  

>SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23)
          Length = 553

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 17/67 (25%), Positives = 31/67 (46%)
 Frame = +1

Query: 298 ALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRS 477
           ++N+  +     +N I +  NS      +  D D SI   D   + NDN ++Y +  S  
Sbjct: 290 SINDNDNSINDNDNSIYDNDNSINDNDNSINDNDNSINDNDNSIYDNDNSSIYDNDNSIY 349

Query: 478 ENFRNLN 498
           +N  ++N
Sbjct: 350 DNDNSIN 356


>SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 154

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +1

Query: 247 RRDPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLT-NSHKSYGYTGIDKDESIVSQDK 423
           RR   ++ E     D   ++E + +D+ T N  P L  N  KSY    I   E  ++ ++
Sbjct: 23  RRAKWRKREKSKGDDDGNVDENEPKDEETANQTPTLKDNDEKSYYKVDIPSSEQRITVEE 82

Query: 424 VAFTNDNGNLYQSKES 471
            +  +  G+L   KES
Sbjct: 83  RSDDSTRGHLGSPKES 98


>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
          Length = 878

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 184 SRSWR-PNHRKTKP*STS*PSQRRDPSQRPEHRDPQDYTALNERKS 318
           SRS+  P  R+T P + S P +RR PS R     P+  +    RKS
Sbjct: 542 SRSYTSPRQRRTSPNNRSPPPRRRSPSPRRPSPSPRRRSTSPSRKS 587


>SB_17622| Best HMM Match : zf-CCHC (HMM E-Value=0.3)
          Length = 374

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/83 (24%), Positives = 35/83 (42%)
 Frame = +1

Query: 199 PNHRKTKP*STS*PSQRRDPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYG 378
           P    TK  ST  P Q     Q   H      T   ++++  KHTE  +    N+  S+ 
Sbjct: 64  PQLTPTKHSSTPTPIQTHRKPQERIHNVLLTKTEAQKKEALVKHTEKKVCPYHNNAASHN 123

Query: 379 YTGIDKDESIVSQDKVAFTNDNG 447
            T   + + ++ ++++ F   NG
Sbjct: 124 LTECKRFKELLYEERLEFLKSNG 146


>SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39)
          Length = 1607

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 20/83 (24%), Positives = 34/83 (40%)
 Frame = +1

Query: 199 PNHRKTKP*STS*PSQRRDPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYG 378
           P    TK  ST  P Q     Q   H      T   ++++  KHTE  +    N+  S+ 
Sbjct: 535 PQLTPTKHSSTPTPIQTHRKPQERIHNVLLTKTEAQKKEALVKHTEKKVCPYHNNAASHN 594

Query: 379 YTGIDKDESIVSQDKVAFTNDNG 447
            T   + + +  ++++ F   NG
Sbjct: 595 LTECKRFKELPYEERLEFLKSNG 617


>SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 322

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = +1

Query: 244 QRRDPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDES 405
           +  D S    H +      ++E+K ++K  ENL+       KSY  +  ++ +S
Sbjct: 168 ESEDNSLNNSHSENDSKNRVSEKKYEEKTGENLVTETYQEQKSYQNSDYERQKS 221


>SB_28271| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14)
          Length = 686

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 20/63 (31%), Positives = 33/63 (52%)
 Frame = +1

Query: 304 NERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESRSEN 483
           N  +S   H E +  + TN  +S+     +  ES  S+ + +FTN    + +S ESR+E+
Sbjct: 359 NRAESFTNHFEEIPESPTNRAESFTNHFGEIPESPESRAE-SFTNHFEEIPESPESRAES 417

Query: 484 FRN 492
           F N
Sbjct: 418 FTN 420


>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
          Length = 2440

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +1

Query: 256 PSQRPEHRDP--QDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDES 405
           P +   H+DP   +  + +E +       +   +LT+ H+S   TG+DK+E+
Sbjct: 208 PERLSTHQDPGVDEGKSRSETELNSARKNSSEVHLTDLHRSQSLTGLDKNEA 259


>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
          Length = 291

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +1

Query: 283 PQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIV 411
           P  Y  L++  +      + +P+ T     +GY G+D  +SI+
Sbjct: 63  PDKYEVLSDADTATIEKSSFLPHRTTRFIVHGYAGLDSVDSII 105


>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1711

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 286  QDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDK 423
            +D T   ER+ +D   EN+  N+ NS  S   + ++    I  +DK
Sbjct: 989  KDKTLKVERELRDSQQENIKMNIENSKLSRKVSSLESSVEIFEKDK 1034


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,350,040
Number of Sequences: 59808
Number of extensions: 346140
Number of successful extensions: 839
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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