Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0500
(613 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY928072-1|AAX78396.1| 1319|Drosophila melanogaster hyperpolariz... 31 0.93
AY928069-1|AAX78393.1| 1282|Drosophila melanogaster hyperpolariz... 31 0.93
AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB... 31 0.93
AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE... 31 0.93
AY070537-1|AAL48008.2| 699|Drosophila melanogaster LD12230p pro... 31 1.2
AY069710-1|AAL39855.1| 844|Drosophila melanogaster LD48056p pro... 31 1.2
AE013599-1660|AAS64862.1| 844|Drosophila melanogaster CG4616-PB... 31 1.2
AE013599-1659|AAF58410.2| 844|Drosophila melanogaster CG4616-PA... 31 1.2
AE013599-1478|AAF58516.2| 134|Drosophila melanogaster CG8511-PA... 28 8.6
>AY928072-1|AAX78396.1| 1319|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B2C2 protein.
Length = 1319
Score = 31.5 bits (68), Expect = 0.93
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 253 DPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV-- 426
DP PE +D +R+ + +H NL NL++ Y Y+G DK + +V++ +
Sbjct: 194 DPEPDPERDRDRDRDRDRDRERERRHLTNLNLNLSS---EYDYSGSDK-QQLVNETYIFK 249
Query: 427 AFTNDNGNLYQSK-ESRSENFRNLN 498
N L +K + +S+ RNL+
Sbjct: 250 CIANSPSFLRTNKIKEQSKKLRNLS 274
>AY928069-1|AAX78393.1| 1282|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B1C1 protein.
Length = 1282
Score = 31.5 bits (68), Expect = 0.93
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 253 DPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV-- 426
DP PE +D +R+ + +H NL NL++ Y Y+G DK + +V++ +
Sbjct: 194 DPEPDPERDRDRDRDRDRDRERERRHLTNLNLNLSS---EYDYSGSDK-QQLVNETYIFK 249
Query: 427 AFTNDNGNLYQSK-ESRSENFRNLN 498
N L +K + +S+ RNL+
Sbjct: 250 CIANSPSFLRTNKIKEQSKKLRNLS 274
>AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB,
isoform B protein.
Length = 1290
Score = 31.5 bits (68), Expect = 0.93
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 253 DPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV-- 426
DP PE +D +R+ + +H NL NL++ Y Y+G DK + +V++ +
Sbjct: 194 DPEPDPERDRDRDRDRDRDRERERRHLTNLNLNLSS---EYDYSGSDK-QQLVNETYIFK 249
Query: 427 AFTNDNGNLYQSK-ESRSENFRNLN 498
N L +K + +S+ RNL+
Sbjct: 250 CIANSPSFLRTNKIKEQSKKLRNLS 274
>AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE,
isoform E protein.
Length = 1327
Score = 31.5 bits (68), Expect = 0.93
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 253 DPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV-- 426
DP PE +D +R+ + +H NL NL++ Y Y+G DK + +V++ +
Sbjct: 194 DPEPDPERDRDRDRDRDRDRERERRHLTNLNLNLSS---EYDYSGSDK-QQLVNETYIFK 249
Query: 427 AFTNDNGNLYQSK-ESRSENFRNLN 498
N L +K + +S+ RNL+
Sbjct: 250 CIANSPSFLRTNKIKEQSKKLRNLS 274
>AY070537-1|AAL48008.2| 699|Drosophila melanogaster LD12230p
protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 175 LQHSRSWRPNHRKTKP*STS*PSQRRDP--SQRPEHRDPQDYTALNERKSQ 321
+Q S+S RP H KT ++ ++R DP S+ P+H +D+ E S+
Sbjct: 124 VQRSKSPRPEHSKTTDRKSTAQARRPDPHRSRSPKHNSRRDHHRNQESSSR 174
>AY069710-1|AAL39855.1| 844|Drosophila melanogaster LD48056p
protein.
Length = 844
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 175 LQHSRSWRPNHRKTKP*STS*PSQRRDP--SQRPEHRDPQDYTALNERKSQ 321
+Q S+S RP H KT ++ ++R DP S+ P+H +D+ E S+
Sbjct: 269 VQRSKSPRPEHSKTTDRKSTAQARRPDPHRSRSPKHNSRRDHHRNQESSSR 319
>AE013599-1660|AAS64862.1| 844|Drosophila melanogaster CG4616-PB,
isoform B protein.
Length = 844
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 175 LQHSRSWRPNHRKTKP*STS*PSQRRDP--SQRPEHRDPQDYTALNERKSQ 321
+Q S+S RP H KT ++ ++R DP S+ P+H +D+ E S+
Sbjct: 269 VQRSKSPRPEHSKTTDRKSTAQARRPDPHRSRSPKHNSRRDHHRNQESSSR 319
>AE013599-1659|AAF58410.2| 844|Drosophila melanogaster CG4616-PA,
isoform A protein.
Length = 844
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 175 LQHSRSWRPNHRKTKP*STS*PSQRRDP--SQRPEHRDPQDYTALNERKSQ 321
+Q S+S RP H KT ++ ++R DP S+ P+H +D+ E S+
Sbjct: 269 VQRSKSPRPEHSKTTDRKSTAQARRPDPHRSRSPKHNSRRDHHRNQESSSR 319
>AE013599-1478|AAF58516.2| 134|Drosophila melanogaster CG8511-PA
protein.
Length = 134
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 403 SIVSQDKVAFTNDNGNLYQSKESRSENFRNLNTGYLPKIIYVQTD 537
+IV QD V N +G+ S E+ S R N GYL KII +T+
Sbjct: 39 TIVKQDNV--NNADGSFNSSYET-SNGIRVENIGYLKKIIVPKTE 80
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,131,857
Number of Sequences: 53049
Number of extensions: 495759
Number of successful extensions: 1640
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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