BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0500 (613 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY928072-1|AAX78396.1| 1319|Drosophila melanogaster hyperpolariz... 31 0.93 AY928069-1|AAX78393.1| 1282|Drosophila melanogaster hyperpolariz... 31 0.93 AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB... 31 0.93 AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE... 31 0.93 AY070537-1|AAL48008.2| 699|Drosophila melanogaster LD12230p pro... 31 1.2 AY069710-1|AAL39855.1| 844|Drosophila melanogaster LD48056p pro... 31 1.2 AE013599-1660|AAS64862.1| 844|Drosophila melanogaster CG4616-PB... 31 1.2 AE013599-1659|AAF58410.2| 844|Drosophila melanogaster CG4616-PA... 31 1.2 AE013599-1478|AAF58516.2| 134|Drosophila melanogaster CG8511-PA... 28 8.6 >AY928072-1|AAX78396.1| 1319|Drosophila melanogaster hyperpolarization-activated ionchannel variant DMIH-A1B2C2 protein. Length = 1319 Score = 31.5 bits (68), Expect = 0.93 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Frame = +1 Query: 253 DPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV-- 426 DP PE +D +R+ + +H NL NL++ Y Y+G DK + +V++ + Sbjct: 194 DPEPDPERDRDRDRDRDRDRERERRHLTNLNLNLSS---EYDYSGSDK-QQLVNETYIFK 249 Query: 427 AFTNDNGNLYQSK-ESRSENFRNLN 498 N L +K + +S+ RNL+ Sbjct: 250 CIANSPSFLRTNKIKEQSKKLRNLS 274 >AY928069-1|AAX78393.1| 1282|Drosophila melanogaster hyperpolarization-activated ionchannel variant DMIH-A1B1C1 protein. Length = 1282 Score = 31.5 bits (68), Expect = 0.93 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Frame = +1 Query: 253 DPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV-- 426 DP PE +D +R+ + +H NL NL++ Y Y+G DK + +V++ + Sbjct: 194 DPEPDPERDRDRDRDRDRDRERERRHLTNLNLNLSS---EYDYSGSDK-QQLVNETYIFK 249 Query: 427 AFTNDNGNLYQSK-ESRSENFRNLN 498 N L +K + +S+ RNL+ Sbjct: 250 CIANSPSFLRTNKIKEQSKKLRNLS 274 >AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB, isoform B protein. Length = 1290 Score = 31.5 bits (68), Expect = 0.93 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Frame = +1 Query: 253 DPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV-- 426 DP PE +D +R+ + +H NL NL++ Y Y+G DK + +V++ + Sbjct: 194 DPEPDPERDRDRDRDRDRDRERERRHLTNLNLNLSS---EYDYSGSDK-QQLVNETYIFK 249 Query: 427 AFTNDNGNLYQSK-ESRSENFRNLN 498 N L +K + +S+ RNL+ Sbjct: 250 CIANSPSFLRTNKIKEQSKKLRNLS 274 >AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE, isoform E protein. Length = 1327 Score = 31.5 bits (68), Expect = 0.93 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Frame = +1 Query: 253 DPSQRPEHRDPQDYTALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV-- 426 DP PE +D +R+ + +H NL NL++ Y Y+G DK + +V++ + Sbjct: 194 DPEPDPERDRDRDRDRDRDRERERRHLTNLNLNLSS---EYDYSGSDK-QQLVNETYIFK 249 Query: 427 AFTNDNGNLYQSK-ESRSENFRNLN 498 N L +K + +S+ RNL+ Sbjct: 250 CIANSPSFLRTNKIKEQSKKLRNLS 274 >AY070537-1|AAL48008.2| 699|Drosophila melanogaster LD12230p protein. Length = 699 Score = 31.1 bits (67), Expect = 1.2 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = +1 Query: 175 LQHSRSWRPNHRKTKP*STS*PSQRRDP--SQRPEHRDPQDYTALNERKSQ 321 +Q S+S RP H KT ++ ++R DP S+ P+H +D+ E S+ Sbjct: 124 VQRSKSPRPEHSKTTDRKSTAQARRPDPHRSRSPKHNSRRDHHRNQESSSR 174 >AY069710-1|AAL39855.1| 844|Drosophila melanogaster LD48056p protein. Length = 844 Score = 31.1 bits (67), Expect = 1.2 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = +1 Query: 175 LQHSRSWRPNHRKTKP*STS*PSQRRDP--SQRPEHRDPQDYTALNERKSQ 321 +Q S+S RP H KT ++ ++R DP S+ P+H +D+ E S+ Sbjct: 269 VQRSKSPRPEHSKTTDRKSTAQARRPDPHRSRSPKHNSRRDHHRNQESSSR 319 >AE013599-1660|AAS64862.1| 844|Drosophila melanogaster CG4616-PB, isoform B protein. Length = 844 Score = 31.1 bits (67), Expect = 1.2 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = +1 Query: 175 LQHSRSWRPNHRKTKP*STS*PSQRRDP--SQRPEHRDPQDYTALNERKSQ 321 +Q S+S RP H KT ++ ++R DP S+ P+H +D+ E S+ Sbjct: 269 VQRSKSPRPEHSKTTDRKSTAQARRPDPHRSRSPKHNSRRDHHRNQESSSR 319 >AE013599-1659|AAF58410.2| 844|Drosophila melanogaster CG4616-PA, isoform A protein. Length = 844 Score = 31.1 bits (67), Expect = 1.2 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = +1 Query: 175 LQHSRSWRPNHRKTKP*STS*PSQRRDP--SQRPEHRDPQDYTALNERKSQ 321 +Q S+S RP H KT ++ ++R DP S+ P+H +D+ E S+ Sbjct: 269 VQRSKSPRPEHSKTTDRKSTAQARRPDPHRSRSPKHNSRRDHHRNQESSSR 319 >AE013599-1478|AAF58516.2| 134|Drosophila melanogaster CG8511-PA protein. Length = 134 Score = 28.3 bits (60), Expect = 8.6 Identities = 19/45 (42%), Positives = 25/45 (55%) Frame = +1 Query: 403 SIVSQDKVAFTNDNGNLYQSKESRSENFRNLNTGYLPKIIYVQTD 537 +IV QD V N +G+ S E+ S R N GYL KII +T+ Sbjct: 39 TIVKQDNV--NNADGSFNSSYET-SNGIRVENIGYLKKIIVPKTE 80 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,131,857 Number of Sequences: 53049 Number of extensions: 495759 Number of successful extensions: 1640 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1540 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1640 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2497240350 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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